Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_B17
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 87 2e-17
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 87 2e-17
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 79 3e-15
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 79 3e-15
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 79 4e-15
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 71 1e-12
U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding p... 38 0.011
U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding p... 38 0.011
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 35 0.079
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 33 0.32
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 31 0.74
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 31 1.3
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 31 1.3
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 31 1.3
U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine rece... 29 3.9
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 29 3.9
AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical ... 29 3.9
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 28 6.9
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 28 6.9
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 86.6 bits (205), Expect = 2e-17
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Frame = +3
Query: 123 QNFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEED 302
+NFDE+MK IGVGLITRKAA + P +E+R DG+ +N STFK T++ FK GEEF E+
Sbjct: 17 ENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTKLSFKLGEEFVEN 76
Query: 303 RADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMT--AKDVTCTRVYK 473
D S+ TFE L Q + V E K + T + DV C R ++
Sbjct: 77 SPDDRTYNSLFTFENGKLTHRQNKIKENHKSSVLTTWLENGKLIQTYQSGDVICRREWE 135
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 86.6 bits (205), Expect = 2e-17
Identities = 41/83 (49%), Positives = 55/83 (66%)
Frame = +3
Query: 123 QNFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEED 302
+NF+E+MK +GVGLITRKAA + PT+E++ +GD + STFK T + FK G+EF+E
Sbjct: 15 ENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFKNTTLSFKLGQEFDET 74
Query: 303 RADGAKVKSVCTFEGNTLKQVQK 371
DG VKSV FE +QK
Sbjct: 75 TPDGRTVKSVVNFENGKFIHIQK 97
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 79.4 bits (187), Expect = 3e-15
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = +3
Query: 123 QNFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEED 302
+NFDE++K +GVG R A P +E +GDE+ + ++STFK +K+K G +E
Sbjct: 17 ENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEK 76
Query: 303 RADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 473
ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 77 TADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 134
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 79.4 bits (187), Expect = 3e-15
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = +3
Query: 123 QNFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEED 302
+NFDE++K +GVG R A P +E +GDE+ + ++STFK +K+K G +E
Sbjct: 32 ENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEK 91
Query: 303 RADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 473
ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 92 TADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 149
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 79.0 bits (186), Expect = 4e-15
Identities = 41/118 (34%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Frame = +3
Query: 123 QNFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEED 302
+NF++++K +GVGL+ RKAA A PT+E++ +G+++++ STFK T ++F G EF+E
Sbjct: 16 ENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTTLEFTLGVEFDET 75
Query: 303 RADGAKVKSVCTFEGNTLKQVQK--APDGLEVTYVREFGPEEMKAVMTAKDVTCTRVY 470
DG + KS T E + VQK + R F E++ + + V R Y
Sbjct: 76 TPDGRQFKSTITIEDGKVVHVQKRIKDSDHDSVITRWFEGEKLITTLQSGSVISRRAY 133
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/74 (43%), Positives = 49/74 (66%)
Frame = +3
Query: 123 QNFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEED 302
+NF+E++K IGVGL+ RKAA+ +PT+E++ DGD ++ STFK ++ FK E+F E
Sbjct: 17 ENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNKLAFKIREKFVEI 76
Query: 303 RADGAKVKSVCTFE 344
D ++ TFE
Sbjct: 77 APDERSYNTLVTFE 90
>U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding
protein protein 3,isoform b protein.
Length = 150
Score = 37.5 bits (83), Expect = 0.011
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +3
Query: 123 QNFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSSTFKTTEMK-FKPGEEF 293
+NFDEF+ GV R+ + L K+ +YN+ ++ K T ++ G+ F
Sbjct: 22 ENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTSKKNTLYHGWELGKTF 81
Query: 294 EEDRADGAKVKSVCTFEGNTLKQVQ---KAPDGLEVTYVREFGPEEMKAVMTAKDVTCTR 464
E + DG K +F+ L + P+ TY +++ M +TC R
Sbjct: 82 EAEGLDGVAHKITFSFKDGVLSEHHIRLNDPEHSAETYYYTIENDQLVMKMVNNGITCRR 141
Query: 465 VYK 473
+K
Sbjct: 142 WFK 144
>U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding
protein protein 3,isoform a protein.
Length = 165
Score = 37.5 bits (83), Expect = 0.011
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +3
Query: 123 QNFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSSTFKTTEMK-FKPGEEF 293
+NFDEF+ GV R+ + L K+ +YN+ ++ K T ++ G+ F
Sbjct: 37 ENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTSKKNTLYHGWELGKTF 96
Query: 294 EEDRADGAKVKSVCTFEGNTLKQVQ---KAPDGLEVTYVREFGPEEMKAVMTAKDVTCTR 464
E + DG K +F+ L + P+ TY +++ M +TC R
Sbjct: 97 EAEGLDGVAHKITFSFKDGVLSEHHIRLNDPEHSAETYYYTIENDQLVMKMVNNGITCRR 156
Query: 465 VYK 473
+K
Sbjct: 157 WFK 159
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 34.7 bits (76), Expect = 0.079
Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 7/124 (5%)
Frame = +3
Query: 123 QNFDEFMKTIGVGLITRKAAN--AVTPTVELRKDGDEYNLVTSSTFKTTEMK-FKPGEEF 293
+NFDEF+ + GV R+ +T + ++ +YN+ ++ K T + ++ G++F
Sbjct: 17 ENFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLTSKKNTNYQAWELGKKF 76
Query: 294 EEDRADGAKVKSVCTFEGNTLKQVQ---KAPDGLEVTYVREFGPEEMKAV-MTAKDVTCT 461
E DG + + F+ L + P+ TY + + M + C
Sbjct: 77 EAPGLDGNQHEITFDFKDEILSEHHIRLNEPETSAETYFYTIDDQNQLVMRMENNGIVCR 136
Query: 462 RVYK 473
R +K
Sbjct: 137 RWFK 140
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 32.7 bits (71), Expect = 0.32
Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 6/123 (4%)
Frame = +3
Query: 123 QNFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP---GEEF 293
+NFDE++ G G TRK T K ++ S+ ++ +K G+ F
Sbjct: 34 ENFDEYLTAKGYGWFTRKLVTFATFKKVFTKTSNKNLFDYSNLTSKKDVHYKNVQLGKAF 93
Query: 294 EEDRADGAKVKSVCTFEGNTLKQVQK---APDGLEVTYVREFGPEEMKAVMTAKDVTCTR 464
+ + D K + T + L + K D E TY F E + M+ V R
Sbjct: 94 QGEGLDSTKHEITFTLKDGHLFEHHKPLEGGDAKEETYEYLFDKEFLLVRMSFNGVEGRR 153
Query: 465 VYK 473
YK
Sbjct: 154 FYK 156
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 31.5 bits (68), Expect = 0.74
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 7/124 (5%)
Frame = +3
Query: 123 QNFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKF----KPGEE 290
+NFDE++ G G TRK T K+ ++ NL S + + F + G +
Sbjct: 36 ENFDEYLTAKGYGWFTRKLVTFATFKKVFAKNANK-NLFDYSNLTSKKDVFYKNVQIGSK 94
Query: 291 FEEDRADGAKVKSVCTF-EGNTLKQVQKAPDG--LEVTYVREFGPEEMKAVMTAKDVTCT 461
FE + D K + T +G+ + + +G E TY F + + M+ ++
Sbjct: 95 FEGEGLDNTKHEVTFTLKDGHLFEHHKPLEEGESKEETYEYYFDGDFLIQKMSFNNIEGR 154
Query: 462 RVYK 473
R YK
Sbjct: 155 RFYK 158
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 132 DEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 281
++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 7 NKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 132 DEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 281
++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 7 NKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 132 DEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 281
++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 7 NKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform c protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 516 ADSRTSRGTIMFI*HLFYTLALSSFFVKLILVFTSVIVCRSNC 644
ADS + G I+F HLF+ + S F L+ + T + V +C
Sbjct: 51 ADSLHNYGQIIFTAHLFFDIQTSHFVCTLLNIPTLIGVISGSC 93
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 171 RKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE 299
+ A + TP D+ + T++T TTE K KP E+ EE
Sbjct: 296 KPAESTETPAAGTEPSTDDGAIETTTTTTTTENKEKPEEKMEE 338
>AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical
protein Y58A7A.4 protein.
Length = 904
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 37 RIKNLSLKSIKLIYKNGIRRQEIQDDFLRRTLMSS*RPSAWV 162
+++N LK+ +L+ KNGI + EI ++ L L +AW+
Sbjct: 800 KLRNRFLKAEQLLIKNGILKTEILENLLGTALYLVENVTAWM 841
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore complex
protein protein7 protein.
Length = 1217
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -1
Query: 271 FISVVLKVEEVTKLYSSPSLRSSTVGVTALAALRVIRPTPMVFMNSSKFCGGSHLVF 101
F S++ K VT S +L SST + +A+ I PT +F NSS G +F
Sbjct: 845 FGSILDKETHVTTTPVSVALPSSTDSTQSKSAIPTIAPTMSLFGNSSTGSFGGSSMF 901
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 167 DQTHADGLHELIKVLRRKSSCISCLRIP 84
D+ D L ELIK+ R+KS CL +P
Sbjct: 242 DKGQDDKLEELIKIERQKSRSNQCLSLP 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,678,688
Number of Sequences: 27780
Number of extensions: 327292
Number of successful extensions: 835
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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