Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_B14
(827 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18719| Best HMM Match : UPF0023 (HMM E-Value=0) 276 1e-74
SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_21903| Best HMM Match : DUF21 (HMM E-Value=0) 30 2.0
SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20) 30 2.6
SB_17984| Best HMM Match : DUF662 (HMM E-Value=4.7) 30 2.6
SB_54275| Best HMM Match : Galactosyl_T (HMM E-Value=2.4e-20) 29 3.5
SB_22629| Best HMM Match : CDC37 (HMM E-Value=3.7) 29 3.5
SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_41099| Best HMM Match : VWA (HMM E-Value=0) 29 4.6
SB_28863| Best HMM Match : EzrA (HMM E-Value=1.1) 29 4.6
SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 29 4.6
SB_27965| Best HMM Match : Sec61_beta (HMM E-Value=0.84) 29 4.6
SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_30970| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_38542| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 28 8.0
>SB_18719| Best HMM Match : UPF0023 (HMM E-Value=0)
Length = 208
Score = 276 bits (677), Expect = 1e-74
Identities = 128/204 (62%), Positives = 167/204 (81%)
Frame = +1
Query: 211 EKDIDEVLQTHTVFTNVSKGQVAKKEDLIKIFAKEDQTEICKEILEKGELQVSDKERHSQ 390
EKDIDEVLQTHTVFTNVSKGQVAK EDL++ F ++QT+IC +IL KGELQVS+KER+ Q
Sbjct: 2 EKDIDEVLQTHTVFTNVSKGQVAKNEDLVRAFGTDNQTDICLKILAKGELQVSEKERNQQ 61
Query: 391 IDSLFKDIATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQILKN 570
++S F+DIAT VADKCVNPETKRPYPV +IE+A+KD+H+SV +S+KQQAL+VI+ LK
Sbjct: 62 LESSFRDIATIVADKCVNPETKRPYPVGVIERAMKDIHYSVIPTRSSKQQALEVIRQLKE 121
Query: 571 EIPIERAQMRVRILLTGKDARKTKDKVVKLATTVEDENWESGTANIVCLIDPGNFRSLDE 750
+ I+RAQMR+R++L GKDA+K ++K+ L T VE E W+ IVCL+DPG +RS+DE
Sbjct: 122 NMQIDRAQMRLRLVLPGKDAKKVQEKLRPLMTKVESEEWDM-DLEIVCLVDPGCYRSIDE 180
Query: 751 MIRTETKGTGQFELLNLKEMVEGD 822
+R ET+G G E+L+LK++ EGD
Sbjct: 181 TLRAETRGRGNMEVLSLKDVQEGD 204
>SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 33.1 bits (72), Expect = 0.28
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = +1
Query: 154 KRFEIACYKNKVLSWRNKLEKDIDEVLQTHTVFTNVSKGQVAKKEDLIKIFAKEDQTEIC 333
KR EIA +K + KLE ++ ++ ++N+ + K + L K+F K QT I
Sbjct: 917 KRQEIAEHKRQEREMLQKLEAKDEDTIEIKDTYSNLQQEVDVKTKKLKKLFMKL-QT-IK 974
Query: 334 KEILEKGELQVSDKERHSQI-DSLFKDIATTVADKCVNP 447
EI E E+ + +++ Q D L +++ + P
Sbjct: 975 SEITELQEVHIRERQELEQAQDELTRELKLNKQEMAKRP 1013
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 178 KNKVLSWRNKLEKDIDEVLQTH-TVFTNVSKGQVAKKEDLIKIFAKEDQTEICKEILEKG 354
K V +++ EK++ ++TH + + ++A KE+L+K + + ++ E+
Sbjct: 885 KKPVAVEKHQSEKEL-AYIETHLSCVVGKLRDELANKEELMKELVQSLEETRAEKEFERR 943
Query: 355 ELQVSDKERHSQIDSLFKDIATTVA 429
EL + +E QI +L KD+ V+
Sbjct: 944 ELLLQCEEHKMQISTLQKDLENNVS 968
>SB_21903| Best HMM Match : DUF21 (HMM E-Value=0)
Length = 1040
Score = 30.3 bits (65), Expect = 2.0
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Frame = +1
Query: 184 KVLSWRNKLEKDIDEVLQTHTVFTNVSKGQVAKK-ED--LIKIFAKEDQTEICKEILEKG 354
KV N LE+D ++ + N + +V + ED L+ + + D + I++ G
Sbjct: 621 KVTDEYNDLEEDEMNIISGALNYRNKTVQEVMTRLEDCFLVNVNSALDFRTMAW-IMQSG 679
Query: 355 E--LQVSDKERHSQIDSLF-KDIATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNK 525
+ V + ERH+ + LF KD+A D C +T + +++ D H V + +
Sbjct: 680 HSRIPVYEDERHNVVGLLFVKDLAFVDPDDCTPLQTVIKFYNHPVQRVFDDTHLDVLLEE 739
Query: 526 SAKQQA 543
K+ +
Sbjct: 740 FKKKHS 745
>SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20)
Length = 906
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 277 AKKEDLIKIFAKEDQTEICKEILEKGELQVSDKERHSQIDSLFKDIATTVADKCVNPET 453
AK+ D+ K+ K+ + + KE+ EK + + E Q +LFKD + + + P+T
Sbjct: 174 AKRLDVQKLGNKDVKERVTKELEEKLDTLAFNTEDIEQDWALFKDTIQSTCNNILGPKT 232
>SB_17984| Best HMM Match : DUF662 (HMM E-Value=4.7)
Length = 301
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 277 AKKEDLIKIFAKEDQTEICKEILEKGELQVSDKERHSQIDSLFKDIATTVADKCVNPET 453
AK+ D+ K+ K+ + + KE+ EK + + E Q +LFKD + + + P+T
Sbjct: 152 AKRLDVQKLGNKDVKERVTKELEEKLDTLAFNTEDIEQDWALFKDTIQSTCNNILGPKT 210
>SB_54275| Best HMM Match : Galactosyl_T (HMM E-Value=2.4e-20)
Length = 767
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +1
Query: 295 IKIFAKEDQTEICKEILEKGE--LQVSDKERHSQIDSLFKDI----ATTVADKCVNPETK 456
I++F K+D+T + +L +GE L D ++ + + + + + + D+C N +
Sbjct: 512 IRLFPKKDKTTPGENLLSEGERRLATDDTKQETTLATADQHMLIRCRVDMVDRCANTDFL 571
Query: 457 RPYPVSIIE 483
PY V +I+
Sbjct: 572 LPYDVDVIK 580
>SB_22629| Best HMM Match : CDC37 (HMM E-Value=3.7)
Length = 504
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 277 AKKEDLIKIFAKEDQTEICKEILEKGELQVSDKERHSQIDSLFKDIATTVADKCVNPET 453
AK+ D+ K+ K+ + + KE+ EK + + E Q +LFKD + + + P+T
Sbjct: 74 AKRLDVQKLGNKDVKERVTKELEEKLDTLAFNTEDIEQDWALFKDTIQSTCNNFLGPKT 132
>SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 699
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 493 KDVHFSVNVNKSAKQQALDVIQILKNEIPIERAQMRVRILLTGK 624
K VHFS+N + A+QQ + I+ L++E E + RV +L GK
Sbjct: 510 KVVHFSMNPSNLARQQRAEEIKRLQDE--NEALRQRVWLLEEGK 551
>SB_41099| Best HMM Match : VWA (HMM E-Value=0)
Length = 3373
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 439 VNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQ 558
V P TKRP P I K D+ F ++V+ + K++ L ++
Sbjct: 1192 VRPPTKRPTPPPKICKQRMDLGFLIDVSSTVKRKNLQYVR 1231
>SB_28863| Best HMM Match : EzrA (HMM E-Value=1.1)
Length = 939
Score = 29.1 bits (62), Expect = 4.6
Identities = 35/129 (27%), Positives = 55/129 (42%)
Frame = +1
Query: 310 KEDQTEICKEILEKGELQVSDKERHSQIDSLFKDIATTVADKCVNPETKRPYPVSIIEKA 489
KE E +E E+GE + KE H ++D LF TT + + P+ YP
Sbjct: 97 KEGAAETDEEDKEEGEEE--KKEEHVELDPLF----TT--ELLMEPQALLFYP------G 142
Query: 490 IKDVHFSVNVNKSAKQQALDVIQILKNEIPIERAQMRVRILLTGKDARKTKDKVVKLATT 669
++D F + + K+ D + + N +P R ++ GK KT + LAT
Sbjct: 143 LED--FDEGLGEVTKRFQ-DAVLSVSNLVPDSYFDAFTRPIINGKVEEKTAGEGPSLATM 199
Query: 670 VEDENWESG 696
ED+ G
Sbjct: 200 FEDDRHLQG 208
>SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Frame = +1
Query: 196 WRNKLEKDIDEVLQTHTVFTNV-SKGQVAKKE------DLIKIFAKEDQTEICKEILE-- 348
W N +EKD+ V H FT+ +G V E + + + +C E +E
Sbjct: 128 WENTIEKDLCRVFPYHEQFTDTGGQGYVTSPECFSIRKGIFVVLQAFKEWTLCFEAMEMN 187
Query: 349 -KGELQVSDKERHSQIDS 399
+ + +V ++E+HS+ +S
Sbjct: 188 LEDQNKVKNREKHSEKNS 205
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 196 WRNKLEKDI-DEVLQTHTVFTNVSKGQVAKKEDLIKIFAKEDQTEICKEILEKGELQVSD 372
WR ++EK I D+ SK + K+++L+K + + Q + E L G+L+
Sbjct: 1265 WRKEIEKGIYDDWEMEELAMLTASKKEAEKRDELVKQESVDSQ-KCDAETLNSGKLKDEK 1323
Query: 373 KERHSQI 393
E +S+I
Sbjct: 1324 CEFNSEI 1330
>SB_27965| Best HMM Match : Sec61_beta (HMM E-Value=0.84)
Length = 1737
Score = 29.1 bits (62), Expect = 4.6
Identities = 23/97 (23%), Positives = 41/97 (42%)
Frame = +1
Query: 406 KDIATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQILKNEIPIE 585
K I + ++ V P+T + ++ I +H +N Q +IQ+LK E E
Sbjct: 584 KQIVKSEQEQPVLPDTVMSDKETKVKTQIDIIH----INSLNPQTRNKIIQVLKEEAQTE 639
Query: 586 RAQMRVRILLTGKDARKTKDKVVKLATTVEDENWESG 696
R R+ K+ K+VKL +++ + G
Sbjct: 640 RQTKSNRLQELWKEKASQSGKLVKLRCEEKEQEQQLG 676
>SB_59549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2631
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 448 ETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQALDVIQILKNEIPIERAQMRVRILLT 618
+ + P V ++E +S NV ++ A+ + EIP+ Q +RIL+T
Sbjct: 1053 QRRTPLNVQVLEFKENVFAYSSNVPVNSSLIAMKFLDDSNREIPVRNLQQAIRILIT 1109
>SB_30970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 259 VSKGQVAKKEDLIKIFAKEDQTEICKEILEKGELQVSDKERHSQIDSLFKDIATTVADK 435
+++ Q KE+ +IF +++ KE L E S E S ID L K++ + +A+K
Sbjct: 39 IAEHQERYKEECQRIFELQNRVLSSKEELSTDE--ASSSEEESDIDELGKNLESMLANK 95
>SB_38542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 606
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 480 REGNQRCPLLSQCKQKCKTTSFRCDTNIKE 569
REG + CPL K K +C N+KE
Sbjct: 489 REGKRVCPLCETMMDKKKRKCVQCGANLKE 518
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 28.3 bits (60), Expect = 8.0
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Frame = +1
Query: 373 KERHSQIDSLF--KDIATTVADKCVNPETKRPYPVSIIEKAIKDVHFSVNVNKSAKQQAL 546
++R QI +L +D T + K VSII++ + + N A ++ +
Sbjct: 382 QDREKQIQTLLEERDFERTEVANATSQVAKAEEEVSIIKRQHEQAAMEYSKNMQALKELI 441
Query: 547 DVIQILKNEIPIERAQMRVRILLTGKDARKTKDKVVKLA 663
++ + K E+ + + R LL+ RKT+D KLA
Sbjct: 442 ELAEKEKAELHCQVEE--ERRLLSFYARRKTEDLQFKLA 478
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,620,735
Number of Sequences: 59808
Number of extensions: 400721
Number of successful extensions: 1285
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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