Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_B10
         (769 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    40   0.090
UniRef50_UPI000038E27D Cluster: hypothetical protein Faci_030017...    38   0.27 
UniRef50_Q3UQ20 Cluster: 0 day neonate lung cDNA, RIKEN full-len...    36   0.84 
UniRef50_Q54LX1 Cluster: Putative uncharacterized protein; n=1; ...    35   2.6  
UniRef50_Q23YC9 Cluster: Putative uncharacterized protein; n=3; ...    35   2.6  
UniRef50_Q7YYY7 Cluster: Putative uncharacterized protein; n=4; ...    34   4.5  
UniRef50_Q21SX6 Cluster: Putative uncharacterized protein precur...    33   5.9  
UniRef50_UPI0001554A5C Cluster: PREDICTED: similar to olfactory ...    33   7.8  
UniRef50_UPI00006CB04C Cluster: hypothetical protein TTHERM_0023...    33   7.8  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 39.5 bits (88), Expect = 0.090
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +1

Query: 415 AGWWYLPARTHKTSYHQ 465
           A WWYLPARTHK SYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_UPI000038E27D Cluster: hypothetical protein Faci_03001766;
           n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
           protein Faci_03001766 - Ferroplasma acidarmanus fer1
          Length = 204

 Score = 37.9 bits (84), Expect = 0.27
 Identities = 30/97 (30%), Positives = 42/97 (43%)
 Frame = -3

Query: 374 GGAAVVTEYEISKRAHVAYFVKYVFSYTCSFEAYLHPFYNNSTNFQFLINTKIYLEN*YF 195
           G A +  +YEI+    V  F     +     E   HP++N   ++    N++I L + YF
Sbjct: 107 GEAHIKVKYEITGNMFVTSFYVKSLTSRIPVEIGFHPYFNVHGSYSISYNSRIVLSHYYF 166

Query: 194 KFYTALENNHAFFHFLNISHFQRCALFEIAYSTILRP 84
             Y   E    FFHF  I       L+ IA  TIL P
Sbjct: 167 -LYILYE--FIFFHFTTI-----LFLYAIAGVTILSP 195


>UniRef50_Q3UQ20 Cluster: 0 day neonate lung cDNA, RIKEN full-length
           enriched library, clone:E030003M06 product:hypothetical
           protein, full insert sequence; n=2; Mus musculus|Rep: 0
           day neonate lung cDNA, RIKEN full-length enriched
           library, clone:E030003M06 product:hypothetical protein,
           full insert sequence - Mus musculus (Mouse)
          Length = 208

 Score = 36.3 bits (80), Expect = 0.84
 Identities = 16/66 (24%), Positives = 32/66 (48%)
 Frame = -3

Query: 350 YEISKRAHVAYFVKYVFSYTCSFEAYLHPFYNNSTNFQFLINTKIYLEN*YFKFYTALEN 171
           Y +S+   +A ++ Y+ S+T S   Y+H  Y     F  +    +Y+ +  F  +  + +
Sbjct: 74  YILSRFQSIATYILYIHSFTFSVRCYIHSLYTFFHVFSPVATYILYIHSFTFSVHCYIHS 133

Query: 170 NHAFFH 153
            + FFH
Sbjct: 134 LYTFFH 139


>UniRef50_Q54LX1 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 824

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -3

Query: 257 NNSTNFQFLINTKIYLEN*YFKFYTALENNHAFFHFLNISHFQRCALF 114
           NN+ N  + IN K  +   Y+K  + +  NH +  FL+I H  RC  F
Sbjct: 604 NNNNNNNYNINQKYDMNRIYWKSISDIIRNHKYLKFLSIKH--RCQFF 649


>UniRef50_Q23YC9 Cluster: Putative uncharacterized protein; n=3;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1538

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 22/56 (39%), Positives = 32/56 (57%)
 Frame = -3

Query: 305 VFSYTCSFEAYLHPFYNNSTNFQFLINTKIYLEN*YFKFYTALENNHAFFHFLNIS 138
           VFS+  +    L+  ++ +   +F I  K YLE  YF FYT + N  +F+ FLNIS
Sbjct: 48  VFSFVLNISYILNIIFDKAIR-KFKI--KKYLET-YFLFYTTIYNKWSFYVFLNIS 99


>UniRef50_Q7YYY7 Cluster: Putative uncharacterized protein; n=4;
            Cryptosporidium|Rep: Putative uncharacterized protein -
            Cryptosporidium parvum
          Length = 2060

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 23/69 (33%), Positives = 33/69 (47%)
 Frame = -3

Query: 413  YFCREAVMRFGLKGGAAVVTEYEISKRAHVAYFVKYVFSYTCSFEAYLHPFYNNSTNFQF 234
            Y   E ++R  LK      T+  ISKR H++  +    S   +   YL PF   S +FQ+
Sbjct: 1086 YMKCEDLLRLHLKAFPLFSTQLNISKRNHLSKLL--CSSSEQAINQYLVPFAPTSISFQY 1143

Query: 233  LINTKIYLE 207
            L+    YLE
Sbjct: 1144 LMYLSEYLE 1152


>UniRef50_Q21SX6 Cluster: Putative uncharacterized protein
           precursor; n=1; Rhodoferax ferrireducens T118|Rep:
           Putative uncharacterized protein precursor - Rhodoferax
           ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
          Length = 611

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 283 KLHVYEKTYLTKYATCALFEISYSVTTAAPPFKPKRITASRQK*AGW 423
           KLH+ ++ Y T   T A+F    S+T    P  P  + A++    GW
Sbjct: 489 KLHLPKQPYATSALTAAMFPSIASITIDGSPLTPSTVIANKSVAIGW 535


>UniRef50_UPI0001554A5C Cluster: PREDICTED: similar to olfactory
           receptor MOR103-6; n=1; Ornithorhynchus anatinus|Rep:
           PREDICTED: similar to olfactory receptor MOR103-6 -
           Ornithorhynchus anatinus
          Length = 148

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = -3

Query: 320 YFVKYVFSYTCSFEAYLHPFYNNSTNFQFLINTKIYLEN*YFKFYTALENNHAFFHFLNI 141
           Y   Y + YT  F  Y + +YN +  F     T  +L + YF  Y    NN+ ++++  +
Sbjct: 74  YSDSYFYYYTYFFYCYYNYYYNYNNAFTTATTTLKHLVHYYFNDYK--NNNNYYYNYYYL 131

Query: 140 SHF 132
           ++F
Sbjct: 132 TYF 134


>UniRef50_UPI00006CB04C Cluster: hypothetical protein
           TTHERM_00239270; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00239270 - Tetrahymena
           thermophila SB210
          Length = 472

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
 Frame = -3

Query: 263 FYNNSTNFQF-----LINTKIYLEN*YFKFYTALENNHAFFHFLNISHFQRCALFEIAYS 99
           F N STNF+       +N+K+ L N   KF+T+    H + ++ N+S F+     ++ Y+
Sbjct: 354 FNNKSTNFEINKSSSKLNSKVNLAN--SKFFTSTPKKHNYSNYSNLSQFKNIQNIDLNYN 411


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,941,581
Number of Sequences: 1657284
Number of extensions: 13718396
Number of successful extensions: 26761
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26741
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)