Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_B06
(854 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 84 1e-16
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 81 9e-16
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 48 1e-05
SB_42197| Best HMM Match : rve (HMM E-Value=0.017) 31 1.2
SB_15183| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 29 4.8
SB_8850| Best HMM Match : LIM (HMM E-Value=0.51) 29 4.8
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 29 6.4
SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_11644| Best HMM Match : Pox_A32 (HMM E-Value=0.026) 28 8.4
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 84.2 bits (199), Expect = 1e-16
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 6/224 (2%)
Frame = +1
Query: 136 LYHTQTQTDG--HVVISPFGIWTLMTGIALGASGNSYRQLSRAFILPKNPATLIEGYKSL 309
L+ T DG ++ SP I + LGA GN+ Q+++ F P + + E +
Sbjct: 17 LHRVLTAQDGQTNLFYSPASIVVALAMTYLGARGNTATQMTKTFHFPTD---VPEKFHDF 73
Query: 310 TDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDF-SDPNSAR-IA 483
+ ++G ++ N +F F +L F+ ++ F A + ++D+ + N AR
Sbjct: 74 LQALNASNSDGNQILMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTV 133
Query: 484 NTYIE-KSGGRVSNVLRSDDFQESRLI-LTNVISFKGLWGLPFNKSDTELEPFYNEDRLV 657
N ++E K+ ++ N++ F + ++ L N + FKG W FN++ T+ F
Sbjct: 134 NRWVEQKTKDKIKNLIPEGMFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTPSQE 193
Query: 658 IGSVNMMYQKGQFPFSNLKKLKAFVLELPYGTDGKYSMLVILPH 789
I V MYQ +F + L ++ELPY + K SM+V+LP+
Sbjct: 194 I-QVQFMYQSSEFRYLESSTLGCQIVELPYAGE-KLSMVVLLPN 235
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 81.4 bits (192), Expect = 9e-16
Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 4/168 (2%)
Frame = +1
Query: 361 NFVFLDNDFTLLPAFRTTLQKDFGASIKVLDF-SDPNSARI-ANTYIE-KSGGRVSNVLR 531
N +FL DF++L F QK + A I ++D+ +D AR N ++E ++ ++ +++
Sbjct: 54 NNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKICDLIA 113
Query: 532 SDDFQE-SRLILTNVISFKGLWGLPFNKSDTELEPFYNEDRLVIGSVNMMYQKGQFPFSN 708
F +RL L N I FKG+W PF K + F + V MM+QK +F + +
Sbjct: 114 PGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSNEV-EVEMMFQKSKFKYLH 172
Query: 709 LKKLKAFVLELPYGTDGKYSMLVILPHPRTKIADMYKNFAXVNLKDVF 852
K K +LELPY D + SM+++LP +A ++ + D+F
Sbjct: 173 SDKYKCKLLELPY-VDTQLSMVLVLPDETEGLARFEQDLTHDKMTDIF 219
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 47.6 bits (108), Expect = 1e-05
Identities = 38/159 (23%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Frame = +1
Query: 361 NFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDP--NSARIANTYI-EKSGGRVSNVLR 531
N ++ ++F +L F ++ + + + +DF + ++ + N ++ +++ G + ++
Sbjct: 59 NKIWGHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIP 118
Query: 532 SDDFQE-SRLILTNVISFKGLWGLPFNKSDTELEPFY-NEDRLVIGSVNMMYQKGQFPFS 705
+RLI+ N + FKG+W F + +T F+ E V MM +K + F
Sbjct: 119 HGVINSLTRLIIVNAVYFKGVWKKEFGEENTFHAAFFVPESHESKIEVEMMTRKMKVNFY 178
Query: 706 NLKKLKAFVLELPYGTDGKYSMLVILPHPRTKIADMYKN 822
+K V+ELPY D +M++ILP + I + K+
Sbjct: 179 YDADIKCRVVELPYSGDDT-AMVIILPEEPSGIFSLEKS 216
>SB_42197| Best HMM Match : rve (HMM E-Value=0.017)
Length = 602
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 555 VDTNQRDILQRPLGIAVQQI*HRTGALLQ*RPTGNRQREHD 677
+DTN+RDI QR L A++ + TG G+ ++EHD
Sbjct: 240 IDTNKRDIFQRQLDSALEGLNGVTGIADDIFVYGSTEKEHD 280
>SB_15183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -3
Query: 297 PFDKRCRIFGQNKRSAQLPIAITGRS*SDSRHQSPYPKRRDHNVPIS 157
P + R FG NK QL + TG S ++ P P RR+H +P++
Sbjct: 1426 PSPSKERAFGVNK---QLYTSPTGESLGVNKQLHPSPHRREHFMPVN 1469
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +3
Query: 645 RPTGNRQREHDVPERTVPVLKPKEA*GLRTGTSLRHRRKVLDAGHTPAPENEDRRHVQEL 824
RP + RE + P +P++ R SLRH + D PE+ +RR +
Sbjct: 1578 RPRQDFSREDAIQSHEGPKEEPRQGTERRREPSLRHDDRHEDRRSEGRPEDYERRDEERR 1637
Query: 825 RXCQSQG 845
R + +G
Sbjct: 1638 REAERKG 1644
>SB_8850| Best HMM Match : LIM (HMM E-Value=0.51)
Length = 1039
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 132 FNAKIPWSLAEIDITITRADEKKN 61
FN ++PWS IT+TR D K +
Sbjct: 15 FNERVPWSSYCFPITVTRKDRKND 38
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -2
Query: 775 PASSTFRRCRKEVPVRRP*ASLGLRTGTVLSGTSCSRCRLPVGLHCRRAPVRCQIC 608
PA T RC E + + L +GT + G + +C+ PVG +R + C
Sbjct: 808 PAGFTGPRC--EADINECESDPCLNSGTCVDGVASFQCKCPVGFTGKRCETKLNHC 861
>SB_7607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2499
Score = 28.7 bits (61), Expect = 6.4
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +1
Query: 505 GGRVSNVLRSDDFQESRLILTNVISFKGLWGLPFNKSDTELEPFYNEDRLVIGSVNMMYQ 684
GGR+S LR F +S +++ S + L G N S L+ Y R +N+M +
Sbjct: 1912 GGRLS--LRPPPFYDSFQFMSS--SLEKLVG---NLSRESLK--YTSQRFECERLNLMAR 1962
Query: 685 KGQFPFSNLKKLKAFVLELPYGTD 756
KG +P+ + L+ F +LP D
Sbjct: 1963 KGVYPYDYMDSLERFDEKLPARED 1986
>SB_11644| Best HMM Match : Pox_A32 (HMM E-Value=0.026)
Length = 1532
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +1
Query: 199 LMTGIALGASGNSYRQLSRAFILPKNPATLIEGYKSLTDVVLDQTANGVSLVSRNFVFLD 378
++TG+ G + + F K+P+ Y +T V Q+ SL +NF D
Sbjct: 1423 VITGLVAGIGWVGRKVIREDFT--KDPSANAMNYAKMTAAVAAQSCERGSLAKQNFT--D 1478
Query: 379 NDFTLLPAFRTTLQ 420
ND+ L +T+L+
Sbjct: 1479 NDYALKLYNQTSLE 1492
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,553,880
Number of Sequences: 59808
Number of extensions: 617665
Number of successful extensions: 1625
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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