Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_B06
(854 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 25 0.89
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 25 0.89
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 1.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 4.7
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 4.7
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 4.7
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 4.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 4.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 4.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 4.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 4.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 4.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 4.7
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 25.0 bits (52), Expect = 0.89
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = -1
Query: 323 STTSVRDLYPSISVAGFLGKINALLSCL 240
++TS +P+I + G+ G+ ++SC+
Sbjct: 76 NSTSENKTFPTIKIVGYKGRALVVVSCV 103
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 25.0 bits (52), Expect = 0.89
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = -1
Query: 323 STTSVRDLYPSISVAGFLGKINALLSCL 240
++TS +P+I + G+ G+ ++SC+
Sbjct: 76 NSTSENKTFPTIKIVGYKGRALVVVSCV 103
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 24.6 bits (51), Expect = 1.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 193 WTLMTGIALGASG 231
WTLM IAL ASG
Sbjct: 4 WTLMAAIALAASG 16
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 758 ESTRCWSYSRTRERRSQ 808
E T C YSR+RER +
Sbjct: 32 ERTSCKRYSRSREREQK 48
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 758 ESTRCWSYSRTRERRSQ 808
E T C YSR+RER +
Sbjct: 32 ERTSCKRYSRSREREQK 48
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 758 ESTRCWSYSRTRERRSQ 808
E T C YSR+RER +
Sbjct: 32 ERTSCKRYSRSREREQK 48
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 758 ESTRCWSYSRTRERRSQ 808
E T C YSR+RER +
Sbjct: 32 ERTSCKRYSRSREREQK 48
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 758 ESTRCWSYSRTRERRSQ 808
E T C YSR+RER +
Sbjct: 265 ERTSCKRYSRSREREQK 281
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 758 ESTRCWSYSRTRERRSQ 808
E T C YSR+RER +
Sbjct: 265 ERTSCKRYSRSREREQK 281
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 758 ESTRCWSYSRTRERRSQ 808
E T C YSR+RER +
Sbjct: 265 ERTSCKRYSRSREREQK 281
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 758 ESTRCWSYSRTRERRSQ 808
E T C YSR+RER +
Sbjct: 265 ERTSCKRYSRSREREQK 281
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 758 ESTRCWSYSRTRERRSQ 808
E T C YSR+RER +
Sbjct: 265 ERTSCKRYSRSREREQK 281
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 758 ESTRCWSYSRTRERRSQ 808
E T C YSR+RER +
Sbjct: 254 ERTSCKRYSRSREREQK 270
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,110
Number of Sequences: 438
Number of extensions: 5869
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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