Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_B04
         (348 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    20   8.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    20   8.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    20   8.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    20   8.3  

>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 191 DTHLYFSTNSCYECFRCQI 247
           D HL+  T+  YE +  QI
Sbjct: 50  DEHLFIVTHQAYELWFKQI 68


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 191 DTHLYFSTNSCYECFRCQI 247
           D HL+  T+  YE +  QI
Sbjct: 50  DEHLFIVTHQAYELWFKQI 68


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 191 DTHLYFSTNSCYECFRCQI 247
           D HL+  T+  YE +  QI
Sbjct: 50  DEHLFIVTHQAYELWFKQI 68


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 125 CHLLIAAISRILM 163
           CH++IAA++  L+
Sbjct: 355 CHMMIAALTTYLV 367


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,169
Number of Sequences: 336
Number of extensions: 991
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)