Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_A19
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    27   0.10 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       26   0.31 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.1  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   6.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.7  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   6.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.9  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -1

Query: 174 IKHTQLLMNVLGKLFFNKSLVNLHLVYTLHCVFARYNDNTINVNK 40
           I++  LL   LG+ FF++ L  L + + +  VFA     T+N+ K
Sbjct: 426 IEYMPLLAGQLGREFFDEKLNALCMTWLMDHVFAIREAATLNLRK 470


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +2

Query: 266 CKEGRKGGKCDIPCEALLDEDIKDDGVCAIKIFEQE 373
           CKEG +G  C+I  +       +++G C  +I + E
Sbjct: 94  CKEGWEGALCNINTDDCSPNPCRNNGSCVDRIADFE 129


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 528 EDAGT*ALLEIRSICNSGTC 587
           +DA    ++ ++ +CN+GTC
Sbjct: 142 KDAALRKVVPLKKLCNNGTC 161


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 239 GLFQIGSEWCKEGRKGGKCDI 301
           GLF  G + C +G     CDI
Sbjct: 133 GLFCNGEKDCSDGSDENTCDI 153


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -2

Query: 35  RVRPPLLHD 9
           ++RPP+LHD
Sbjct: 100 QIRPPILHD 108


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -2

Query: 35  RVRPPLLHD 9
           ++RPP+LHD
Sbjct: 100 QIRPPILHD 108


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -2

Query: 35  RVRPPLLHD 9
           ++RPP+LHD
Sbjct: 100 QIRPPILHD 108


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -2

Query: 35  RVRPPLLHD 9
           ++RPP+LHD
Sbjct: 100 QIRPPILHD 108


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 162 GCA*SSKAAIETHLLWL 212
           GC+ S+   I T L WL
Sbjct: 347 GCSTSTSTNINTKLFWL 363


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,082
Number of Sequences: 336
Number of extensions: 2818
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)