Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_A16
(848 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0624 + 23772613-23774671,23774737-23775596 33 0.22
07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467 30 2.7
12_02_0035 - 12563503-12564405,12564494-12565611,12565709-125662... 29 3.5
02_05_0740 - 31404004-31404180,31404365-31405261,31405351-314059... 29 4.7
02_01_0348 - 2506007-2506909,2507003-2508120,2508230-2508883,250... 29 4.7
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055 29 4.7
01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713 29 4.7
06_03_0588 + 22567820-22570802,22570917-22571269 29 6.2
06_03_0577 + 22461831-22462023,22462378-22463160,22463380-224649... 29 6.2
10_08_0172 - 15406961-15407488,15408068-15408187,15408308-154085... 28 8.2
07_03_0848 + 21992610-21992724,21993009-21993137,21993625-219937... 28 8.2
>01_05_0624 + 23772613-23774671,23774737-23775596
Length = 972
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Frame = -3
Query: 696 HYFSFLLNDFP---WIALKFIGLNKLK--DITGFQLG-TVPEHYGSFLEEKYLSLFRANI 535
HY+ DFP +I+ + L +LK D++G LG ++PE GSF +L+L R
Sbjct: 110 HYYKCAHVDFPLYGYISSSLVSLRQLKRLDLSGNVLGESMPEFLGSFQSLTHLNLARMGF 169
Query: 534 VNRI 523
R+
Sbjct: 170 YGRV 173
>07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467
Length = 945
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 118 RNKMSVYLSRMLKTAIRGRVACVLPTGAISPKQQFISIKSVYIPVLNQLSRRFRSSDAIQ 297
++ ++ + SR KTA+ AC+L G + F ++K+ +LN ++ + DA Q
Sbjct: 836 KDSVTPFASRCSKTAVESLSACLLSNGC----EHFTTLKTDIQGILNDEAKFAQLRDAAQ 891
Query: 298 P 300
P
Sbjct: 892 P 892
>12_02_0035 - 12563503-12564405,12564494-12565611,12565709-12566239,
12566337-12567153
Length = 1122
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 118 RNKMSVYLSRMLKTAIRGRVACVLPTGAISPKQQFISIKSVYIPVLNQLSRRFRSSDAIQ 297
++ ++ + SR KTA+ AC+L G + F ++K+ +LN ++ + DA Q
Sbjct: 1013 KDSVTPFASRCSKTAVESLSACLLSNGC----EHFTTLKADIQGMLNDEAKYAQLRDAAQ 1068
Query: 298 P 300
P
Sbjct: 1069 P 1069
>02_05_0740 -
31404004-31404180,31404365-31405261,31405351-31405978,
31405997-31406468,31406575-31407052
Length = 883
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 118 RNKMSVYLSRMLKTAIRGRVACVLPTGAISPKQQFISIKSVYIPVLNQLSRRFRSSDAIQ 297
++ ++ + SR KTA+ AC+L G + F ++K+ +LN ++ + DA Q
Sbjct: 717 KDSVTPFASRCSKTAVESLSACLLSNGC----EHFTTLKADIQGMLNDEAKFAQLRDAAQ 772
Query: 298 P 300
P
Sbjct: 773 P 773
>02_01_0348 -
2506007-2506909,2507003-2508120,2508230-2508883,
2508920-2509046
Length = 933
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 118 RNKMSVYLSRMLKTAIRGRVACVLPTGAISPKQQFISIKSVYIPVLNQLSRRFRSSDAIQ 297
++ ++ + SR KTA+ AC+L G + F ++K+ +LN ++ + DA Q
Sbjct: 824 KDSVTPFASRCSKTAVESLSACLLSNGC----EHFTTLKADIQGMLNDEAKFAQLRDAAQ 879
Query: 298 P 300
P
Sbjct: 880 P 880
>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
Length = 963
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 118 RNKMSVYLSRMLKTAIRGRVACVLPTGAISPKQQFISIKSVYIPVLNQLSRRFRSSDAIQ 297
++ ++ + SR KTA+ AC+L G + F ++K+ +LN ++ + DA Q
Sbjct: 854 KDSVTPFASRCSKTAVESLSACLLSNGC----EHFTTLKADIQGMLNDEAKFAQLRDAAQ 909
Query: 298 P 300
P
Sbjct: 910 P 910
>01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713
Length = 946
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 118 RNKMSVYLSRMLKTAIRGRVACVLPTGAISPKQQFISIKSVYIPVLNQLSRRFRSSDAIQ 297
++ ++ + SR KTA+ AC+L G + F ++K+ +LN ++ + DA Q
Sbjct: 837 KDSVTPFASRCSKTAVESLSACLLSNGC----EHFTTLKADIQGMLNDEAKFAQLRDAAQ 892
Query: 298 P 300
P
Sbjct: 893 P 893
>06_03_0588 + 22567820-22570802,22570917-22571269
Length = 1111
Score = 28.7 bits (61), Expect = 6.2
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 2/109 (1%)
Frame = -3
Query: 828 AQPGRXRHSVAESKPX*GIISLWHHYEARLLEVTFF*IRLVDICHYFSFLLNDFPWIALK 649
A G S+A SK ++ + + +L F L+D+ + L P I
Sbjct: 208 ALTGEIPESLASSKSLQVLVLMNNALSGQLPVALFNCSSLIDLDLKHNSFLGSIPPITAI 267
Query: 648 FIGLNKLKDITGFQLGTVPEHYGSFLEEKYLSLFRANIVNRIG--YDHI 508
+ + L GT+P G+ YLSL N+V I +DH+
Sbjct: 268 SLQMKYLDLEDNHFTGTIPSSLGNLSSLIYLSLIANNLVGTIPDIFDHV 316
>06_03_0577 +
22461831-22462023,22462378-22463160,22463380-22464936,
22465082-22465449
Length = 966
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -3
Query: 687 SFLLNDFPWIALKFIGLNKLKDITGFQLGTVPEHYGSFLEEKYLSLFRANIVNRIGYDHI 508
+FL P K GL +L + G +P GSF+ YL+L N++ + D I
Sbjct: 500 NFLHGSIPSTMNKLTGLQELDLSSNNISGIIPVFLGSFIGLTYLNLSFNNLIGEVPDDGI 559
>10_08_0172 -
15406961-15407488,15408068-15408187,15408308-15408568,
15408684-15409112
Length = 445
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 619 NVLEFVKPYELESYPREVIEKEREIMTYIYQPNSKKCHLQESCFI 753
N++E+VKPY +S E+I R +Y + +K + C +
Sbjct: 321 NLIEWVKPYSTDSKKLEIIMDPRLEGSYSLKSAAKLASVANKCLV 365
>07_03_0848 +
21992610-21992724,21993009-21993137,21993625-21993723,
21993833-21993885,21994157-21994230,21994382-21994433
Length = 173
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 607 LEASNVLEFVKPYELESYPREVI 675
+ +NV +F KP E+ SYP++V+
Sbjct: 93 ISIANVADFAKPPEMISYPQQVV 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,787,620
Number of Sequences: 37544
Number of extensions: 411536
Number of successful extensions: 958
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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