Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_A16
(848 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC106065-1|AAI06066.1| 449|Homo sapiens required for meiotic nu... 77 6e-14
AL590543-1|CAI10940.1| 449|Homo sapiens required for meiotic nu... 77 6e-14
AL590413-1|CAI13588.1| 449|Homo sapiens required for meiotic nu... 77 6e-14
AK000634-1|BAA91299.1| 449|Homo sapiens protein ( Homo sapiens ... 77 8e-14
BC119683-1|AAI19684.1| 449|Homo sapiens required for meiotic nu... 77 1e-13
AL590413-8|CAI13595.1| 211|Homo sapiens required for meiotic nu... 76 2e-13
AL590413-7|CAI13594.1| 238|Homo sapiens required for meiotic nu... 67 7e-11
BC117394-1|AAI17395.1| 360|Homo sapiens chromosome 12 open read... 33 1.7
BC117392-1|AAI17393.1| 360|Homo sapiens chromosome 12 open read... 33 1.7
AK058052-1|BAB71641.1| 360|Homo sapiens protein ( Homo sapiens ... 33 1.7
BC039352-1|AAH39352.1| 107|Homo sapiens C12orf42 protein protein. 30 9.2
AY062326-1|AAL65754.1| 124|Homo sapiens immunoglobulin heavy ch... 30 9.2
AL772287-2|CAI13626.1| 3359|Homo sapiens cadherin-like 23 protein. 30 9.2
AL731541-6|CAI40841.1| 3359|Homo sapiens cadherin-like 23 protein. 30 9.2
AL359183-3|CAI13426.1| 3359|Homo sapiens cadherin-like 23 protein. 30 9.2
>BC106065-1|AAI06066.1| 449|Homo sapiens required for meiotic
nuclear division 1 homolog (S. cerevisiae) protein.
Length = 449
Score = 77.4 bits (182), Expect = 6e-14
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 7/202 (3%)
Frame = +1
Query: 262 LSRRFRS--SDAIQPTAALENASIPLKKKIVHKKSIAEN--LSQKEGHFLTLAYATANSY 429
L R F S ++ P PLK + S LS E A+ATA+ Y
Sbjct: 123 LKRHFSSVSTETFVPKQDFPQVKRPLKASRTRQPSRTNLPVLSVNEDLMHCTAFATADEY 182
Query: 430 DLKALKEALVEQKLYEPGNLKTVEIGNVVVANAVYNIGSE--QREIFFFKEGAVVFWNCS 603
L L + L E +L + N++V V N E IFFF+EGA VFWN
Sbjct: 183 HLGNLSQDLASHGYVEVTSLPR-DAANILVMG-VENSAKEGDPGTIFFFREGAAVFWNVK 240
Query: 604 ELEASNVLEFVKPYELESYPREVIEKEREIMTYIYQPNSKKCHLQESCFIMVPERDNS-L 780
+ +V++ ++ +E++ Y ++ E E + YI K H E + D++ L
Sbjct: 241 DKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSKLHRGEIKLNSELDLDDAIL 300
Query: 781 XRFAFSHAMAXSARLGAWEARL 846
+FAFS+A+ S +L WEA L
Sbjct: 301 EKFAFSNALCLSVKLAIWEASL 322
>AL590543-1|CAI10940.1| 449|Homo sapiens required for meiotic
nuclear division 1 homolog (S. cerevisiae) protein.
Length = 449
Score = 77.4 bits (182), Expect = 6e-14
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 7/202 (3%)
Frame = +1
Query: 262 LSRRFRS--SDAIQPTAALENASIPLKKKIVHKKSIAEN--LSQKEGHFLTLAYATANSY 429
L R F S ++ P PLK + S LS E A+ATA+ Y
Sbjct: 123 LKRHFSSVSTETFVPKQDFPQVKRPLKASRTRQPSRTNLPVLSVNEDLMHCTAFATADEY 182
Query: 430 DLKALKEALVEQKLYEPGNLKTVEIGNVVVANAVYNIGSE--QREIFFFKEGAVVFWNCS 603
L L + L E +L + N++V V N E IFFF+EGA VFWN
Sbjct: 183 HLGNLSQDLASHGYVEVTSLPR-DAANILVMG-VENSAKEGDPGTIFFFREGAAVFWNVK 240
Query: 604 ELEASNVLEFVKPYELESYPREVIEKEREIMTYIYQPNSKKCHLQESCFIMVPERDNS-L 780
+ +V++ ++ +E++ Y ++ E E + YI K H E + D++ L
Sbjct: 241 DKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSKLHRGEIKLNSELDLDDAIL 300
Query: 781 XRFAFSHAMAXSARLGAWEARL 846
+FAFS+A+ S +L WEA L
Sbjct: 301 EKFAFSNALCLSVKLAIWEASL 322
>AL590413-1|CAI13588.1| 449|Homo sapiens required for meiotic
nuclear division 1 homolog (S. cerevisiae) protein.
Length = 449
Score = 77.4 bits (182), Expect = 6e-14
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 7/202 (3%)
Frame = +1
Query: 262 LSRRFRS--SDAIQPTAALENASIPLKKKIVHKKSIAEN--LSQKEGHFLTLAYATANSY 429
L R F S ++ P PLK + S LS E A+ATA+ Y
Sbjct: 123 LKRHFSSVSTETFVPKQDFPQVKRPLKASRTRQPSRTNLPVLSVNEDLMHCTAFATADEY 182
Query: 430 DLKALKEALVEQKLYEPGNLKTVEIGNVVVANAVYNIGSE--QREIFFFKEGAVVFWNCS 603
L L + L E +L + N++V V N E IFFF+EGA VFWN
Sbjct: 183 HLGNLSQDLASHGYVEVTSLPR-DAANILVMG-VENSAKEGDPGTIFFFREGAAVFWNVK 240
Query: 604 ELEASNVLEFVKPYELESYPREVIEKEREIMTYIYQPNSKKCHLQESCFIMVPERDNS-L 780
+ +V++ ++ +E++ Y ++ E E + YI K H E + D++ L
Sbjct: 241 DKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSKLHRGEIKLNSELDLDDAIL 300
Query: 781 XRFAFSHAMAXSARLGAWEARL 846
+FAFS+A+ S +L WEA L
Sbjct: 301 EKFAFSNALCLSVKLAIWEASL 322
>AK000634-1|BAA91299.1| 449|Homo sapiens protein ( Homo sapiens
cDNA FLJ20627 fis, clone KAT03923. ).
Length = 449
Score = 77.0 bits (181), Expect = 8e-14
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Frame = +1
Query: 373 LSQKEGHFLTLAYATANSYDLKALKEALVEQKLYEPGNLKTVEIGNVVVANAVYNIGSE- 549
LS E A+ATA+ Y L L + L E +L + N++V V N E
Sbjct: 164 LSVNEDPMHCTAFATADEYHLGNLSQDLASHGYVEVTSLPR-DAANILVMG-VENSAKEG 221
Query: 550 -QREIFFFKEGAVVFWNCSELEASNVLEFVKPYELESYPREVIEKEREIMTYIYQPNSKK 726
IFFF+EGA VFWN + +V++ ++ +E++ Y ++ E E + YI K
Sbjct: 222 DPGTIFFFREGAAVFWNVKDKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSK 281
Query: 727 CHLQESCFIMVPERDNS-LXRFAFSHAMAXSARLGAWEARL 846
H E + D++ L +FAFS+A+ S +L WEA L
Sbjct: 282 LHRGEIKLNSELDLDDAILEKFAFSNALCLSVKLAIWEASL 322
>BC119683-1|AAI19684.1| 449|Homo sapiens required for meiotic
nuclear division 1 homolog (S. cerevisiae) protein.
Length = 449
Score = 76.6 bits (180), Expect = 1e-13
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Frame = +1
Query: 373 LSQKEGHFLTLAYATANSYDLKALKEALVEQKLYEPGNLKTVEIGNVVVANAVYNIGSE- 549
LS E A+ATA+ Y L L + L E +L + N++V V N E
Sbjct: 164 LSVNEDLMHCTAFATADEYHLGNLSQDLASHGYVEVTSLPR-DAANILVMG-VENSAKEG 221
Query: 550 -QREIFFFKEGAVVFWNCSELEASNVLEFVKPYELESYPREVIEKEREIMTYIYQPNSKK 726
IFFF+EGA VFWN + +V++ ++ +E++ Y ++ E E + YI K
Sbjct: 222 DPGTIFFFREGAAVFWNVKDKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSK 281
Query: 727 CHLQESCFIMVPERDNS-LXRFAFSHAMAXSARLGAWEARL 846
H E + D++ L +FAFS+A+ S +L WEA L
Sbjct: 282 LHRGEIKLNSELDLDDAILEKFAFSNALCLSVKLAIWEASL 322
>AL590413-8|CAI13595.1| 211|Homo sapiens required for meiotic
nuclear division 1 homolog (S. cerevisiae) protein.
Length = 211
Score = 75.8 bits (178), Expect = 2e-13
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Frame = +1
Query: 406 AYATANSYDLKALKEALVEQKLYEPGNLKTVEIGNVVVANAVYNIGSE--QREIFFFKEG 579
A+ATA+ Y L L + L E +L + N++V V N E IFFF+EG
Sbjct: 5 AFATADEYHLGNLSQDLASHGYVEVTSLPR-DAANILVMG-VENSAKEGDPGTIFFFREG 62
Query: 580 AVVFWNCSELEASNVLEFVKPYELESYPREVIEKEREIMTYIYQPNSKKCHLQESCFIMV 759
A VFWN + +V++ ++ +E++ Y ++ E E + YI K H E
Sbjct: 63 AAVFWNVKDKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSKLHRGEIKLNSE 122
Query: 760 PERDNS-LXRFAFSHAMAXSARLGAWEARL 846
+ D++ L +FAFS+A+ S +L WEA L
Sbjct: 123 LDLDDAILEKFAFSNALCLSVKLAIWEASL 152
>AL590413-7|CAI13594.1| 238|Homo sapiens required for meiotic
nuclear division 1 homolog (S. cerevisiae) protein.
Length = 238
Score = 67.3 bits (157), Expect = 7e-11
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +1
Query: 559 IFFFKEGAVVFWNCSELEASNVLEFVKPYELESYPREVIEKEREIMTYIYQPNSKKCHLQ 738
IFFF+EGA VFWN + +V++ ++ +E++ Y ++ E E + YI K H
Sbjct: 15 IFFFREGAAVFWNVKDKTMKHVMKVLEKHEIQPYEIALVHWENEELNYIKIEGQSKLHRG 74
Query: 739 ESCFIMVPERDNS-LXRFAFSHAMAXSARLGAWEARL 846
E + D++ L +FAFS+A+ S +L WEA L
Sbjct: 75 EIKLNSELDLDDAILEKFAFSNALCLSVKLAIWEASL 111
>BC117394-1|AAI17395.1| 360|Homo sapiens chromosome 12 open reading
frame 42 protein.
Length = 360
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 241 YIPVLNQLSRRFRSSDAIQPTAALENASIPLKKKIVHKKSIAENLSQKEGHFLTLAYATA 420
YIP+++ + RS+ + + E S+P + I H K+ +E+ + HFL
Sbjct: 31 YIPIVSSATLWDRSTPSAKHIPCYERTSVPCSRFINHMKNFSESPKFRSLHFLNFPVFPE 90
Query: 421 NSYDLKALKEAL 456
+ + A K L
Sbjct: 91 RTQNSMACKRLL 102
>BC117392-1|AAI17393.1| 360|Homo sapiens chromosome 12 open reading
frame 42 protein.
Length = 360
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 241 YIPVLNQLSRRFRSSDAIQPTAALENASIPLKKKIVHKKSIAENLSQKEGHFLTLAYATA 420
YIP+++ + RS+ + + E S+P + I H K+ +E+ + HFL
Sbjct: 31 YIPIVSSATLWDRSTPSAKHIPCYERTSVPCSRFINHMKNFSESPKFRSLHFLNFPVFPE 90
Query: 421 NSYDLKALKEAL 456
+ + A K L
Sbjct: 91 RTQNSMACKRLL 102
>AK058052-1|BAB71641.1| 360|Homo sapiens protein ( Homo sapiens
cDNA FLJ25323 fis, clone TST00323. ).
Length = 360
Score = 32.7 bits (71), Expect = 1.7
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +1
Query: 241 YIPVLNQLSRRFRSSDAIQPTAALENASIPLKKKIVHKKSIAENLSQKEGHFLTLAYATA 420
YIP+++ + RS+ + + E S+P + I H K+ +E+ + HFL
Sbjct: 31 YIPIVSSATLWDRSTPSAKHIPCYERTSVPCSRFINHMKNFSESPKFRSLHFLNFPVFPE 90
Query: 421 NSYDLKALKEAL 456
+ + A K L
Sbjct: 91 RTQNSMACKRLL 102
>BC039352-1|AAH39352.1| 107|Homo sapiens C12orf42 protein protein.
Length = 107
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 241 YIPVLNQLSRRFRSSDAIQPTAALENASIPLKKKIVHKKSIAENLSQKEGHFL 399
YIP+++ + RS+ + + E S+P + I H K+ +E+ + HFL
Sbjct: 31 YIPIVSSDTLWDRSTPSAKHIPCYERTSVPCSRFINHMKNFSESPKFRSLHFL 83
>AY062326-1|AAL65754.1| 124|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 124
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 661 DSSQVHRA*QTQGHYWLPARNSSRTLRLLP*RKISLSVQSQYC-KPHWLRPHYLFLL 494
D S ++ A +G + + NS TL L +C + HWLRP Y + L
Sbjct: 46 DGSNIYSADSVKGRFTISRDNSKNTLYLQMNSLRPEDTAVYFCARGHWLRPTYFYRL 102
>AL772287-2|CAI13626.1| 3359|Homo sapiens cadherin-like 23 protein.
Length = 3359
Score = 30.3 bits (65), Expect = 9.2
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +1
Query: 235 SVYIPVLNQLSRRFRSSDAIQPTAALENASIPLKKKIVHKKSIAENLSQKEGHFLTLAYA 414
SVYI +LN+L + S+A A LEN ++ + V SI +NL+Q F
Sbjct: 1303 SVYITLLNELDEAVQFSNASYEAAILENLALGTEIVRVQAYSI-DNLNQITYRFNAYTST 1361
Query: 415 TANS-YDLKALKEALVEQKLY--EPGNLKTVEI 504
A + + + A+ + Q L E G+ T+ +
Sbjct: 1362 QAKALFKIDAITGVITVQGLVDREKGDFYTLTV 1394
>AL731541-6|CAI40841.1| 3359|Homo sapiens cadherin-like 23 protein.
Length = 3359
Score = 30.3 bits (65), Expect = 9.2
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +1
Query: 235 SVYIPVLNQLSRRFRSSDAIQPTAALENASIPLKKKIVHKKSIAENLSQKEGHFLTLAYA 414
SVYI +LN+L + S+A A LEN ++ + V SI +NL+Q F
Sbjct: 1303 SVYITLLNELDEAVQFSNASYEAAILENLALGTEIVRVQAYSI-DNLNQITYRFNAYTST 1361
Query: 415 TANS-YDLKALKEALVEQKLY--EPGNLKTVEI 504
A + + + A+ + Q L E G+ T+ +
Sbjct: 1362 QAKALFKIDAITGVITVQGLVDREKGDFYTLTV 1394
>AL359183-3|CAI13426.1| 3359|Homo sapiens cadherin-like 23 protein.
Length = 3359
Score = 30.3 bits (65), Expect = 9.2
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +1
Query: 235 SVYIPVLNQLSRRFRSSDAIQPTAALENASIPLKKKIVHKKSIAENLSQKEGHFLTLAYA 414
SVYI +LN+L + S+A A LEN ++ + V SI +NL+Q F
Sbjct: 1303 SVYITLLNELDEAVQFSNASYEAAILENLALGTEIVRVQAYSI-DNLNQITYRFNAYTST 1361
Query: 415 TANS-YDLKALKEALVEQKLY--EPGNLKTVEI 504
A + + + A+ + Q L E G+ T+ +
Sbjct: 1362 QAKALFKIDAITGVITVQGLVDREKGDFYTLTV 1394
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,433,161
Number of Sequences: 237096
Number of extensions: 2351737
Number of successful extensions: 3937
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3930
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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