Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_A13
(799 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical p... 68 9e-12
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 32 0.41
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 32 0.41
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 32 0.55
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 32 0.55
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 32 0.55
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 32 0.55
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 31 1.3
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 31 1.3
U00032-11|AAA50630.1| 189|Caenorhabditis elegans Hypothetical p... 31 1.3
AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical ... 31 1.3
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 30 1.7
Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical p... 30 2.2
Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z46937-4|CAA87059.2| 221|Caenorhabditis elegans Hypothetical pr... 30 2.2
AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A ... 30 2.2
AF099920-3|AAK29845.1| 216|Caenorhabditis elegans Hypothetical ... 30 2.2
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 30 2.2
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 30 2.2
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical ... 29 2.9
AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical ... 29 3.9
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 29 3.9
U40955-4|AAA81752.1| 297|Caenorhabditis elegans Hypothetical pr... 29 5.1
U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4 p... 29 5.1
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 29 5.1
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 29 5.1
Z92777-1|CAB07166.1| 73|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 28 6.7
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p... 28 6.7
AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical ... 28 6.7
AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical ... 28 6.7
Z81128-4|CAB03403.1| 898|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical ... 28 8.9
>U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical
protein ZK1127.4 protein.
Length = 349
Score = 67.7 bits (158), Expect = 9e-12
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 4/211 (1%)
Frame = +2
Query: 119 KKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQA-DFEGRNPEDSDFHGIKQLL 295
+K +E + + E+++D E D D D + E+ + DFE P + D GI +L
Sbjct: 30 RKEEEPEPVEDVEEDEDVSDEDDEDIDDEEEDEDEQNIMDFDFEAYPPSEDDRDGIVNML 89
Query: 296 RQLFLKSNVDLGGLAQIIISQNYIGSVVKQCLXXXXXXXXXXXXXXXXVFGVTTVVNITK 475
Q FL++++DL +++ II++ G V+ Q +G+ T V +
Sbjct: 90 TQTFLRTDIDLKAMSEGIIAKAPHGVVLTQA------YDDEETEEDYMAYGLCTTVPLND 143
Query: 476 RKNEPSVAQIRELLTKL---SQENADPRTKELIKYILADDSQHTGLVINERILNIPAAIS 646
K++ + I++L T + +++ A + I+ I + L +NER+LN P +
Sbjct: 144 NKDD-APKFIKDLFTYVLNRAKKGAPTEIYKKIEEIQVSGDGKSALFVNERLLNFPTIVV 202
Query: 647 VPLFASLQTELEKAHRKNMLYNFKYLIWISK 739
+F S++ +L K +K +I+I K
Sbjct: 203 PQIFGSIREDLSGFETK-----YKTIIYIQK 228
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 107 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFE 247
K+P +D E KE+D ++D D D D V +KE +A E
Sbjct: 1072 KIPKMLKPVVDDRREDRKERDRDRDRDRDRDEDREKVRDKEDKAQRE 1118
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 32.3 bits (70), Expect = 0.41
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 107 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFE 247
K+P +D E KE+D ++D D D D V +KE +A E
Sbjct: 1072 KIPKMLKPVVDDRREDRKERDRDRDRDRDRDEDREKVRDKEDKAQRE 1118
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 107 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQAD 241
K + +KE + + E EKE+D G EK+ D D + +K+ + D
Sbjct: 1228 KDKKEPHKEKEKDKEKEKEEDKGKEKEKHKDKDKDKEHKKKSRED 1272
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 107 KMPNKKNKEIDTNS-ESEKEQDSGSEKDSDFDSDGNYVGEKE-LQADFEGRNPEDSDFHG 280
K+ +K K+ +T S E +KEQ+ +++ S + D EK+ L+++ + + E++
Sbjct: 9920 KLEEQKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKES 9979
Query: 281 IKQLLRQLFLKSNVD 325
+ + ++ LK +
Sbjct: 9980 VDEKPKKKVLKKKTE 9994
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 107 KMPNKKNKEIDTNS-ESEKEQDSGSEKDSDFDSDGNYVGEKE-LQADFEGRNPEDSDFHG 280
K+ +K K+ +T S E +KEQ+ +++ S + D EK+ L+++ + + E++
Sbjct: 9940 KLEEQKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKES 9999
Query: 281 IKQLLRQLFLKSNVD 325
+ + ++ LK +
Sbjct: 10000 VDEKPKKKVLKKKTE 10014
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 107 KMPNKKNKEIDTNS-ESEKEQDSGSEKDSDFDSDGNYVGEKE-LQADFEGRNPEDSDFHG 280
K+ +K K+ +T S E +KEQ+ +++ S + D EK+ L+++ + + E++
Sbjct: 9940 KLEEQKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKES 9999
Query: 281 IKQLLRQLFLKSNVD 325
+ + ++ LK +
Sbjct: 10000 VDEKPKKKVLKKKTE 10014
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 104 AKMPNKKNKEIDTNSESEKEQDSGSEKDSD 193
AK+ +K + D++ ES+ SGSE DSD
Sbjct: 546 AKLGKRKRRHRDSDDESDPSSGSGSESDSD 575
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 89 RFVYFAKMP-NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPED 265
++V A +P + K + N E E+E++ EK+ + D + EKE + D E +
Sbjct: 343 QYVLPANVPFYAEEKVVKKNKEKEREKEKDKEKEKEKDKEKEKEKEKEKEKDKEKEREKR 402
Query: 266 SDFHGIKQ 289
IK+
Sbjct: 403 KSKEKIKE 410
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +2
Query: 107 KMPNKKNKEIDTNSESEKEQDS---GSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 271
K KK K+ + + EKE+D +KD D D D +K+ + D + ED D
Sbjct: 295 KKDKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDKD 352
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 107 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSD-GNYVGEKELQADFEGRNPEDSD 271
K KK+K+ + + E +K++D +KD D D D N +K+ + D + E+ +
Sbjct: 258 KDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKE 313
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 107 KMPNKKNKEIDTNSESEKEQD---SGSEKDSDFDSDGN 211
K +KK K+ D N E EKE+D +KD D D D N
Sbjct: 179 KKKDKKKKK-DDNDEEEKEKDKKKKDKKKDDDDDEDEN 215
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/55 (23%), Positives = 27/55 (49%)
Frame = +2
Query: 107 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 271
K +KK + D E++K++D +KD D + +K+ + + + +D D
Sbjct: 200 KKKDKKKDDDDDEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKKKDDKEKDDDD 254
>U00032-11|AAA50630.1| 189|Caenorhabditis elegans Hypothetical
protein F37A4.2 protein.
Length = 189
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 119 KKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 271
KKN E D +S + + DSGS D++ + N E + + + E + E ++
Sbjct: 136 KKNNESDESSSDDSDSDSGSGSDNESEGKQNTEVEDKDKVEKEETDDEKTE 186
>AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical
protein F55A3.7 protein.
Length = 491
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 113 PNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADF 244
P +++ + SES++++ G E +SD D +G+ ++ +Q F
Sbjct: 446 PEEEDASAGSGSESDEDESEGEETESDDDDEGSLDSDEFVQPIF 489
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 608 INERILNIPAAISVPLFASLQTELEKAHRKNMLYNFKYLIWISKTYTTGESSXVLFANQE 787
INER L + V +F +L+ ++ L FK +IW+ K Y ++ ++
Sbjct: 125 INERNLVVILTTHVDIFIVRAIDLQMENQTERLEAFKLIIWMLKIYEKSNLKKLIDSSAA 184
Query: 788 EKS 796
+K+
Sbjct: 185 QKN 187
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 116 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDF 274
+KK+++ SESEK S + D D D D N +K + + + P DF
Sbjct: 31 SKKDRKRKLASESEKS-GSDDDDDDDDDEDENVTSKKSKKQKRKNKAPSGRDF 82
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 116 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDF 274
+KK+++ SESEK S + D D D D N +K + + + P DF
Sbjct: 31 SKKDRKRKLASESEKS-GSDDDDDDDDDEDENVTSKKSKKQKRKNKAPSGRDF 82
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 608 INERILNIPAAISVPLFASLQTELEKAHRKNMLYNFKYLIWISKTYTTGESSXVLFANQE 787
INER L + V +F +L+ ++ L FK +IW+ K Y ++ ++
Sbjct: 125 INERNLVVILTTHVDIFIVRAIDLQMENQTERLEAFKLIIWMLKIYEKSNLKKLIDSSAA 184
Query: 788 EKS 796
+K+
Sbjct: 185 QKN 187
>Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 95 VYFAKMPNKKNKEIDTNSESEKEQDSGSEKDSDFDS-DGNYVGEKELQADFEGRNPE 262
V ++ P +K+KE+ +E E E++ G E D ++ +G Y E A+ E +PE
Sbjct: 111 VITSETPVEKHKEVHFKNEPE-EEEIGKEDDGGGEAEEGEYEEENGSDAEEEEESPE 166
>Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 95 VYFAKMPNKKNKEIDTNSESEKEQDSGSEKDSDFDS-DGNYVGEKELQADFEGRNPE 262
V ++ P +K+KE+ +E E E++ G E D ++ +G Y E A+ E +PE
Sbjct: 111 VITSETPVEKHKEVHFKNEPE-EEEIGKEDDGGGEAEEGEYEEENGSDAEEEEESPE 166
>Z46937-4|CAA87059.2| 221|Caenorhabditis elegans Hypothetical
protein F43C1.5 protein.
Length = 221
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 107 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQAD 241
K+P K +K + K+ + D D DG Y+GE E++++
Sbjct: 152 KIPGKNSKNSKISVNKAKKLEPRRRSDEDRVPDGPYIGEGEVKSE 196
>AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A
protein protein.
Length = 657
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 95 VYFAKMPNKKNKEIDTNSESEKEQDSGSEKDSDFDS-DGNYVGEKELQADFEGRNPE 262
V ++ P +K+KE+ +E E E++ G E D ++ +G Y E A+ E +PE
Sbjct: 111 VITSETPVEKHKEVHFKNEPE-EEEIGKEDDGGGEAEEGEYEEENGSDAEEEEESPE 166
>AF099920-3|AAK29845.1| 216|Caenorhabditis elegans Hypothetical
protein H06H21.3 protein.
Length = 216
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 NKKNKEIDTNSESEKEQDSGSEKDSDFDS-DGNYVGEKELQA 238
++K+ E + S+ E+E D SE++SD DS D + + E++L A
Sbjct: 152 SEKSDE-EAGSDKEEESDDDSEEESDEDSDDSDNIREEDLAA 192
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +2
Query: 116 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHG 280
+++ E + ESE+++D ++DS+ D D ++E + + E + E+ + G
Sbjct: 884 DEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEEEEEEG 938
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/52 (19%), Positives = 27/52 (51%)
Frame = +2
Query: 116 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 271
++ +E + E E E+D E+D D + D + ++ ++++E ++ +
Sbjct: 882 DEDEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEE 933
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +2
Query: 116 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHG 280
+++ E + ESE+++D ++DS+ D D ++E + + E + E+ + G
Sbjct: 884 DEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEEEEEEG 938
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/52 (19%), Positives = 27/52 (51%)
Frame = +2
Query: 116 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 271
++ +E + E E E+D E+D D + D + ++ ++++E ++ +
Sbjct: 882 DEDEEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEYEDEEEDEEE 933
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +2
Query: 113 PNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 271
P K+ ++D + + E + D + D D DGN + + D + + D D
Sbjct: 249 PVKEEPDLDDDDDDEDDDDDDGDDDDDEKDDGNDAEKDDGDDDDDDDDGNDDD 301
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +2
Query: 113 PNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 271
P K+ ++D + + E + D + D D DGN + + D + + D D
Sbjct: 249 PVKEEPDLDDDDDDEDDDDDDGDDDDDEKDDGNDAEKDDGDDDDDDDDGNDDD 301
>AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical
protein F55A3.3 protein.
Length = 1030
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +2
Query: 113 PNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPE 262
P +++ + SES++++ G E +SD D +G+ ++ D+ E
Sbjct: 946 PEEEDASAGSGSESDEDESEGEETESDDDDEGSLDSDESEGKDWSDLEEE 995
>AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical
protein W03F9.10 protein.
Length = 602
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 122 KNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGI 283
K EI+T E +KE+++G D D + +Y+GE + E NP F I
Sbjct: 46 KQAEIETREEPKKEEENGD----DLDVEIDYIGE---TIEIEPDNPHAQYFSAI 92
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 107 KMPNKKNKEIDTNSESEKEQDSGSEKDS 190
K N K+ + SE + E DSGSEKD+
Sbjct: 483 KQKNDKDSSEGSGSEPDDEYDSGSEKDA 510
>U40955-4|AAA81752.1| 297|Caenorhabditis elegans Hypothetical
protein F48B9.2 protein.
Length = 297
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +2
Query: 116 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDF 274
++K EID N+ E+++ S SE ++ ++ GEK + + ++SD+
Sbjct: 159 DEKTNEIDLNTYFEQDEASDSEPKTEMETQVESSGEKIIILFESEESQDESDY 211
>U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4
protein.
Length = 697
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 107 KMPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPED 265
K +K++ E T SE + E DSGSE+DS + E+++ + P++
Sbjct: 480 KKEDKESSE-GTGSEPDDEYDSGSEQDSSGTGESEPDSEQDVPSKRRKGEPKE 531
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 125 NKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDF 274
+ EID ++ESE+ +D S+ + D D GE+ +Q + E DS F
Sbjct: 678 SSEIDWDAESEEVEDEESDDSDEEDEDD---GERLVQLNTETSTGADSVF 724
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 122 KNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 271
K E D + + K++ G D +SDG E E + + EG + EDSD
Sbjct: 702 KLDESDEDEDELKDRKHGLFDDEASESDGEDEFEDEDEEEPEGEDLEDSD 751
>Z92777-1|CAB07166.1| 73|Caenorhabditis elegans Hypothetical
protein C17H1.2 protein.
Length = 73
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = +2
Query: 122 KNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFH 277
+N+ +TN SE D G DF S + EK+LQAD D +FH
Sbjct: 3 ENESENTNVFSEFLYDIG-----DFFSGNDRKQEKQLQADLRAAQAADLEFH 49
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +2
Query: 119 KKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIKQLLR 298
+K +E + E EKE++ EK + + + EKE + + E R ++ + ++R
Sbjct: 231 EKEREKEREKEREKEREKEREKQKEREKEREKEREKEKKREEEARRKKEEASTPV--IIR 288
Query: 299 QLFLKSNVDLGG 334
L + + D G
Sbjct: 289 PLLSQEDDDSNG 300
>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
protein C28H8.3 protein.
Length = 1714
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 107 KMPNKKNKEIDTNSESEKEQDSGSEKDSD 193
K+ +K + + + +K++D+G EKD D
Sbjct: 1194 KLAKRKRDDAEKKKKGDKDEDAGPEKDDD 1222
>AF039040-2|AAO91670.1| 615|Caenorhabditis elegans Hypothetical
protein T22B11.4b protein.
Length = 615
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 125 NKEIDTNSESEKEQDSGSEKDSDFDS 202
++E T SE ++E+DS S++D D +S
Sbjct: 435 DEETTTTSEDDEEKDSNSDEDEDEES 460
>AF039040-1|AAB94184.1| 553|Caenorhabditis elegans Hypothetical
protein T22B11.4a protein.
Length = 553
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 125 NKEIDTNSESEKEQDSGSEKDSDFDS 202
++E T SE ++E+DS S++D D +S
Sbjct: 435 DEETTTTSEDDEEKDSNSDEDEDEES 460
>Z81128-4|CAB03403.1| 898|Caenorhabditis elegans Hypothetical
protein T23D8.4 protein.
Length = 898
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +2
Query: 116 NKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIKQLL 295
++ E SEK S S+ DSD D N+ E E + +D D + L
Sbjct: 189 SESKAEKSPGKPSEKAAVSDSDSDSDDDDSSNWSSEP------ESNSSDDEDSVTKMEQL 242
Query: 296 RQLFLK 313
R+ FLK
Sbjct: 243 RRYFLK 248
>AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical
protein F55A12.5 protein.
Length = 849
Score = 27.9 bits (59), Expect = 8.9
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Frame = +2
Query: 98 YFAKMPNKKNK-EIDT-NSESEKEQ----DSGSEKDSDFDSDGNYVGEKELQADFEGRNP 259
Y KM +K K EI +SESE+E+ D E + D D D Y E+E +
Sbjct: 653 YTPKMDVQKKKVEIPVISSESEEEEYEEEDEYEEYEDDEDEDEYYEEEEENEV------- 705
Query: 260 EDSDF---HGIKQLLRQLFLKSNV 322
ED DF +++L+ Q+ L+++V
Sbjct: 706 EDDDFLTETQLEELMEQIILQTSV 729
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,158,282
Number of Sequences: 27780
Number of extensions: 284763
Number of successful extensions: 1491
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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