Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_A11
         (790 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    23   3.2  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   3.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   4.3  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   9.9  

>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 241 GVGAHLAHERELSVPPDGVVAHLLSAGMLLEIPAVEQPH 125
           G+G       E  V   G+V     AG+  E+ +VE  H
Sbjct: 201 GIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHH 239


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -1

Query: 241 GVGAHLAHERELSVPPDGVVAHLLSAGMLLEIPAVEQPH 125
           G+G       E  V   G+V     AG+  E+ +VE  H
Sbjct: 258 GIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHH 296


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 575 SSTASSGFGSLTKKKNFDSGVSXSLTL 655
           S   +   GSLT KKNF +    ++TL
Sbjct: 90  SENKNCNAGSLTVKKNFANKYCGNITL 116


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 143 GNFQEHSSRE 172
           GNF EH SRE
Sbjct: 77  GNFNEHVSRE 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,342
Number of Sequences: 438
Number of extensions: 2821
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)