Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_A10
         (845 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1337 - 26238506-26238737,26239728-26240703,26241266-26242802     29   6.2  
03_02_0764 + 10990220-10992410,10992809-10993616,10994734-109949...    28   8.1  
01_01_0690 - 5306754-5307047,5307107-5307279,5308223-5308370,530...    28   8.1  

>08_02_1337 - 26238506-26238737,26239728-26240703,26241266-26242802
          Length = 914

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
 Frame = +1

Query: 373  DIDPSQDPMAGTIFMERSK--ASIEN-GMTRKRSQ---HQIADNKLKKSSSCSTIYLDDS 534
            D++P  DP +   F  R +    IEN G++    Q   +  A+N+ + S S S     D 
Sbjct: 830  DVEPFMDPSSEDKFSSRYRLVGVIENRGLSIHIGQCVAYVRANNQQQGSGSSSWYCATDD 889

Query: 535  TVSQPNLKNTVRCVALAIYY 594
             + + +L+  ++C A  ++Y
Sbjct: 890  DIKEISLEEVLKCEAYLLFY 909


>03_02_0764 +
           10990220-10992410,10992809-10993616,10994734-10994968,
           10995028-10995169,10997365-10997444,10997636-10997776
          Length = 1198

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
 Frame = +1

Query: 469 HQIADNKLKKSSS--CSTIYLDDST--VSQ-PNLKNTVRCVALAIYYHIK 603
           HQ+++  + ++ +  C  +  D  T  V+Q P++ + V+C   A+YYH K
Sbjct: 446 HQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYHGK 495


>01_01_0690 - 5306754-5307047,5307107-5307279,5308223-5308370,
            5309110-5309356,5309694-5309839,5312482-5312707,
            5313652-5313874,5314054-5314202,5315345-5315514,
            5316064-5316135,5317610-5317741,5317813-5317900,
            5319440-5319656,5320123-5320306,5320644-5320727,
            5321148-5321242,5321519-5321562,5321707-5322367,
            5323053-5323356
          Length = 1218

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +1

Query: 658  SKEGVSDDYDKYNPEHKQIYKFVRTLFNAAQLTAECAIITLVYLERLL 801
            +K+   +D+++   E    ++F++T F  +   A  A   LVY++RLL
Sbjct: 903  TKQKGPEDFNESELERVLFHEFLKTRFAPSYARATAATNWLVYMDRLL 950


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,094,461
Number of Sequences: 37544
Number of extensions: 392137
Number of successful extensions: 963
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)