Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_A10
         (845 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069580-1|AAL39725.1|  406|Drosophila melanogaster LD31675p pro...   253   2e-67
AE014134-2099|AAF53122.1|  406|Drosophila melanogaster CG14939-P...   253   2e-67
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.      32   0.86 
AE014298-1758|AAN09642.1|  330|Drosophila melanogaster CG32655-P...    30   4.6  
AE014296-769|AAN11587.2|  898|Drosophila melanogaster CG14998-PE...    29   6.1  

>AY069580-1|AAL39725.1|  406|Drosophila melanogaster LD31675p
           protein.
          Length = 406

 Score =  253 bits (620), Expect = 2e-67
 Identities = 133/200 (66%), Positives = 150/200 (75%), Gaps = 27/200 (13%)
 Frame = +1

Query: 325 SSNNIQHISEREPDDGDIDPSQDPMAGTIFMERSKASIENG-MTRKRSQHQIADNK---- 489
           +  N+QHISERE  +G+ DPS DP A T+F+ERSK  +ENG MTRKRSQ QIA       
Sbjct: 79  NQQNLQHISEREALEGEEDPSVDPTAATMFLERSK--VENGGMTRKRSQQQIAQQAGSGG 136

Query: 490 ----------------------LKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYYHIK 603
                                 +KKSSSCSTIYLDDSTVSQPNLKNTV+CV+LAIYYHIK
Sbjct: 137 GGGGGGGGGSTPGGNSCGGGGGMKKSSSCSTIYLDDSTVSQPNLKNTVKCVSLAIYYHIK 196

Query: 604 NRMSERRLDIFDEKLHPLSKEGVSDDYDKYNPEHKQIYKFVRTLFNAAQLTAECAIITLV 783
           NR S+RRLDIFDEKLHPL+ + V D+YD +NPEH+QIYKFVRTLFNAAQLTAECAIITLV
Sbjct: 197 NRQSDRRLDIFDEKLHPLTHDQVPDNYDTHNPEHRQIYKFVRTLFNAAQLTAECAIITLV 256

Query: 784 YLERLLICAELDIAPSNWKR 843
           YLERLL  AELD+ P NWKR
Sbjct: 257 YLERLLTYAELDVGPCNWKR 276



 Score = 31.9 bits (69), Expect = 1.1
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +1

Query: 229 MGNQNSCCCYRSPSPIRK 282
           MGN+NSCC Y SP   RK
Sbjct: 1   MGNKNSCCAYSSPQSDRK 18


>AE014134-2099|AAF53122.1|  406|Drosophila melanogaster CG14939-PA
           protein.
          Length = 406

 Score =  253 bits (620), Expect = 2e-67
 Identities = 133/200 (66%), Positives = 150/200 (75%), Gaps = 27/200 (13%)
 Frame = +1

Query: 325 SSNNIQHISEREPDDGDIDPSQDPMAGTIFMERSKASIENG-MTRKRSQHQIADNK---- 489
           +  N+QHISERE  +G+ DPS DP A T+F+ERSK  +ENG MTRKRSQ QIA       
Sbjct: 79  NQQNLQHISEREALEGEEDPSVDPTAATMFLERSK--VENGGMTRKRSQQQIAQQAGSGG 136

Query: 490 ----------------------LKKSSSCSTIYLDDSTVSQPNLKNTVRCVALAIYYHIK 603
                                 +KKSSSCSTIYLDDSTVSQPNLKNTV+CV+LAIYYHIK
Sbjct: 137 GGGGGGGGGSTPGGNSCGGGGGMKKSSSCSTIYLDDSTVSQPNLKNTVKCVSLAIYYHIK 196

Query: 604 NRMSERRLDIFDEKLHPLSKEGVSDDYDKYNPEHKQIYKFVRTLFNAAQLTAECAIITLV 783
           NR S+RRLDIFDEKLHPL+ + V D+YD +NPEH+QIYKFVRTLFNAAQLTAECAIITLV
Sbjct: 197 NRQSDRRLDIFDEKLHPLTHDQVPDNYDTHNPEHRQIYKFVRTLFNAAQLTAECAIITLV 256

Query: 784 YLERLLICAELDIAPSNWKR 843
           YLERLL  AELD+ P NWKR
Sbjct: 257 YLERLLTYAELDVGPCNWKR 276



 Score = 31.9 bits (69), Expect = 1.1
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +1

Query: 229 MGNQNSCCCYRSPSPIRK 282
           MGN+NSCC Y SP   RK
Sbjct: 1   MGNKNSCCAYSSPQSDRK 18


>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
          Length = 1715

 Score = 32.3 bits (70), Expect = 0.86
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
 Frame = +1

Query: 271 PIRKDIVKLEDYLPEGEVSSNNIQHISEREPDDGDIDPSQDPMAGTIFMER---SKASIE 441
           P +K    LE   PE + S +  +  S+ E   GD D   DP+ G +   R   ++   +
Sbjct: 417 PNQKSDSSLESSSPERQDSESESRQASDEESSSGDSDYLIDPVTGWLSRRRETSTEREEK 476

Query: 442 NGMTRKRSQHQIADNKLKKS 501
           +  +++ S  +I D + ++S
Sbjct: 477 SDQSQQESSEEITDEQKEES 496


>AE014298-1758|AAN09642.1|  330|Drosophila melanogaster CG32655-PA
           protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
 Frame = +1

Query: 265 PSPIRKDIVKLEDYLPEGEVSSNNIQHIS-EREPDDGDIDPSQDPMAGTIFMERSKASIE 441
           P+     +VK     P G  +S  I+    ER P +  +  +  P       ER KAS  
Sbjct: 95  PATSASSVVKKSSEKPSGSRTSPIIKSARLERRPSNKSVTIADPPTQSLTTSERPKASSS 154

Query: 442 NGMTRKRSQHQI 477
            G+ +K ++  +
Sbjct: 155 QGLKKKENRRSL 166


>AE014296-769|AAN11587.2|  898|Drosophila melanogaster CG14998-PE,
           isoform E protein.
          Length = 898

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
 Frame = +1

Query: 418 ERSKASIEN----GMTRKRSQHQIADNKLKKSSSCSTIYLD-DSTVSQPNLKNTV 567
           +R   SI N     +TR+ S+ ++AD+  KK +S ST   D DS  S P +  +V
Sbjct: 165 QRRSTSISNVAGASLTRRSSERELADSGAKKRASSSTDRQDEDSVDSSPMVFRSV 219


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,098,881
Number of Sequences: 53049
Number of extensions: 727290
Number of successful extensions: 1988
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1985
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)