Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_A09
(883 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 56 7e-09
SPAC13D6.05 |alp11|SPAC4G9.01|tubulin specific chaperone cofacto... 54 2e-08
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 33 0.054
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 31 0.29
SPAPB2B4.05 |vma5||V-type ATPase subunit C|Schizosaccharomyces p... 31 0.29
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.38
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 30 0.50
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 27 4.7
SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces pom... 27 4.7
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 26 8.2
SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosa... 26 8.2
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 26 8.2
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 56.0 bits (129), Expect = 7e-09
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+ V + G + G + + G T F G W G+ L GKNDGSV G RYF C + +G+F
Sbjct: 6 VGDEVLIRG-ELGIVRFAGSTDFESGIWLGVELLNGKGKNDGSVKGKRYFSCEKGKGIFV 64
Query: 638 R 640
R
Sbjct: 65 R 65
>SPAC13D6.05 |alp11|SPAC4G9.01|tubulin specific chaperone cofactor
B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 54.4 bits (125), Expect = 2e-08
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGE--WAGIVLDEPIGKNDGSVAGVRYFQCPEKRGV 631
+ R G + G I YIG + W G+ DEP+GKNDG+V+G RYF K G
Sbjct: 154 LNSRCCAAGERYGTIRYIGLVPEINNDNLWVGVEFDEPVGKNDGTVSGKRYFNAKNKHGS 213
Query: 632 FSR 640
F R
Sbjct: 214 FLR 216
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 33.1 bits (72), Expect = 0.054
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -2
Query: 846 VRISPLVVVEIEAFILLLTILRILPFGERVRLGRAAPEGGRSKTLPASDTGDAS 685
+++ PL+ E++ F L+TI R+L G + L + E G KT G++S
Sbjct: 47 IKVQPLLANEVQTFKALITIHRVLQEGHKSALVDSQSEKGWLKTCERQYDGESS 100
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 30.7 bits (66), Expect = 0.29
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +2
Query: 146 ENHKMPVETKISFSDGSSTDTLRKLSDDLSRKHLSDLIEAEEDEVSSSL 292
EN +PV +KI+ + DTL +++D LSR H+S EE + SSSL
Sbjct: 118 ENENLPV-SKIA-EVTNELDTLVRINDQLSRNHISG--TTEEMQSSSSL 162
>SPAPB2B4.05 |vma5||V-type ATPase subunit C|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 30.7 bits (66), Expect = 0.29
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 131 KDFFFENHKMPVETKISFSDGSSTDTLRKLSDDLSRKHLSDLIEAEED 274
KD+F K P+E SF+ SS + K ++S + S++I E D
Sbjct: 93 KDYFMVQDKSPLEYVSSFAWNSSRFHMNKTISEISDRITSEIISFEND 140
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 30.3 bits (65), Expect = 0.38
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +2
Query: 158 MPVETKISFSDGSSTDTLRKLSDDLSRKHLSDLIEAEED 274
+P++ K+S S SST +++ L + ++KH+ I +D
Sbjct: 855 LPMKKKLSHSSASSTRSIKSLLTNANQKHIHSSINETDD 893
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 564 QLVKTMDQWQVFVIFNVQRNEVCFLD*LGSLEFPSLYTHRTMHRPCRM 707
Q V + Q +F++F + N C+LD + +LY + PC M
Sbjct: 500 QFVHNLSQKLLFLVFQLSTNTNCYLDSKNATSLLALYINALKVFPCLM 547
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Frame = +2
Query: 674 HTPHDASPVSDAGSVFERP-----PSGAA-RPKRTLSPNGSI 781
H P P+SD S+ P PS A RP +PNGS+
Sbjct: 301 HPPKQQGPISDFRSIPSSPKTEGAPSNAQFRPSLPATPNGSV 342
>SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 470
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 480 PTQTRSPIMKLSVSSVNITLWSEDLRSPASL 388
P ++ PI KLSVS + W +D A++
Sbjct: 46 PNPSKFPIHKLSVSFPEVNSWEKDTNKDATV 76
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 25.8 bits (54), Expect = 8.2
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +2
Query: 617 EKRGVFSRLTRLTRVPFAIHTPH--DASPVSDAGS-VFERPPSGAARPKRT 760
EK+G R T+ P H PH D S + GS + ER RP T
Sbjct: 23 EKKGSIDRKTKNKAYPSTTHDPHQNDDSNIPGLGSGLLERIKDIVQRPTDT 73
>SPBC776.12c |hsk1||serine/threonine protein kinase
Hsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 188 DGSSTDTLRKLSDDLSRKHLSDLIEAEEDE 277
D S +T + +DL+ KHLS +++ +E E
Sbjct: 450 DNSFGETSFEKDEDLTAKHLSHILDFKEQE 479
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 353 MDALWEKHARRLSEAGLRRSS 415
++ LWE+H ++L AGL +S
Sbjct: 193 IEELWEEHQKQLKNAGLEPAS 213
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,773,936
Number of Sequences: 5004
Number of extensions: 82475
Number of successful extensions: 276
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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