Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_A09
(883 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC150332-1|AAI50333.1| 1011|Homo sapiens CAP-GLY domain containi... 133 7e-31
AF041059-1|AAB96784.1| 419|Homo sapiens similar to KIAA0291: DD... 133 7e-31
AC005015-1|AAF03524.1| 1046|Homo sapiens KIAA0291; similar roden... 133 7e-31
AB006629-1|BAA22960.2| 1024|Homo sapiens KIAA0291 protein. 133 7e-31
X64838-1|CAA46050.1| 1427|Homo sapiens restin protein. 123 1e-27
M97501-1|AAA35693.1| 1392|Homo sapiens cytoplasmic linker protei... 123 1e-27
BC126305-1|AAI26306.1| 1438|Homo sapiens CLIP1 protein protein. 123 1e-27
BC117209-1|AAI17210.1| 1438|Homo sapiens CLIP1 protein protein. 123 1e-27
BC114213-1|AAI14214.1| 1392|Homo sapiens CAP-GLY domain containi... 123 1e-27
BC062543-1|AAH62543.1| 653|Homo sapiens CLIP1 protein protein. 123 1e-27
BC047895-1|AAH47895.1| 449|Homo sapiens CLIP1 protein protein. 123 1e-27
BC039081-1|AAH39081.1| 350|Homo sapiens CLIP1 protein protein. 123 1e-27
BC014486-1|AAH14486.2| 438|Homo sapiens CLIP3 protein protein. 90 9e-18
BC013116-1|AAH13116.2| 547|Homo sapiens CAP-GLY domain containi... 90 9e-18
AL117468-1|CAB55943.1| 161|Homo sapiens hypothetical protein pr... 90 9e-18
AJ427922-1|CAD20873.1| 547|Homo sapiens CLIP-170-related protei... 90 9e-18
BC126167-1|AAI26168.1| 705|Homo sapiens CAP-GLY domain containi... 84 7e-16
AK024722-1|BAB14974.1| 492|Homo sapiens protein ( Homo sapiens ... 84 7e-16
AC093593-1|AAX88898.1| 614|Homo sapiens unknown protein. 84 7e-16
AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350... 83 2e-15
AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350... 83 2e-15
AL390718-2|CAI14834.1| 1291|Homo sapiens centrosomal protein 350... 83 2e-15
AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350... 83 2e-15
AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated p... 83 2e-15
AB007949-1|BAA32325.2| 1288|Homo sapiens KIAA0480 protein protein. 83 2e-15
AB209042-1|BAD92279.1| 724|Homo sapiens Hypothetical protein FL... 82 3e-15
BC015310-1|AAH15310.2| 554|Homo sapiens CLIP4 protein protein. 81 5e-15
AK057267-1|BAB71403.1| 345|Homo sapiens protein ( Homo sapiens ... 81 5e-15
AF433661-1|AAP97312.1| 601|Homo sapiens unknown protein. 81 5e-15
X98801-1|CAA67333.1| 1263|Homo sapiens dynactin protein. 79 2e-14
AF086947-1|AAD03694.1| 1261|Homo sapiens dynactin 1 protein. 77 6e-14
AF064205-1|AAD55811.1| 1278|Homo sapiens dynactin 1 p150 isoform... 77 6e-14
D49738-1|BAA08572.1| 193|Homo sapiens cytoskeleton associated p... 70 1e-11
CR541971-1|CAG46769.1| 193|Homo sapiens CKAP1 protein. 70 1e-11
BT007424-1|AAP36092.1| 244|Homo sapiens cytoskeleton-associated... 70 1e-11
BC052812-1|AAH52812.1| 244|Homo sapiens tubulin folding cofacto... 70 1e-11
BC005969-1|AAH05969.1| 244|Homo sapiens tubulin folding cofacto... 70 1e-11
AF013488-1|AAB67716.1| 244|Homo sapiens tubulin folding cofacto... 70 1e-11
AD001527-3|AAB51182.1| 201|Homo sapiens hypothetical 28.2Da pro... 70 1e-11
AF279865-1|AAF81263.1| 1826|Homo sapiens kinesin-like protein GA... 67 7e-11
AB014539-1|BAA31614.3| 1835|Homo sapiens KIAA0639 protein protein. 67 7e-11
AB209115-1|BAD92352.1| 1065|Homo sapiens restin isoform a varian... 52 3e-06
U61232-1|AAB17538.1| 527|Homo sapiens cofactor E protein. 40 0.012
BT007086-1|AAP35749.1| 527|Homo sapiens tubulin-specific chaper... 40 0.012
BC008654-1|AAH08654.1| 527|Homo sapiens tubulin folding cofacto... 40 0.012
AL672237-1|CAH72080.1| 527|Homo sapiens tubulin folding cofacto... 40 0.012
AL357556-2|CAI15017.1| 527|Homo sapiens tubulin folding cofacto... 40 0.012
BC012342-1|AAH12342.1| 953|Homo sapiens cylindromatosis (turban... 35 0.34
AL390718-4|CAI14836.1| 581|Homo sapiens centrosomal protein 350... 35 0.34
AJ250014-1|CAB93533.1| 956|Homo sapiens cyld protein. 35 0.34
AB020656-1|BAA74872.2| 960|Homo sapiens KIAA0849 protein protein. 35 0.34
AJ406740-1|CAC10804.1| 80|Homo sapiens immunoglobulin kappa ch... 30 9.7
AJ406736-1|CAC10800.1| 81|Homo sapiens immunoglobulin kappa ch... 30 9.7
>BC150332-1|AAI50333.1| 1011|Homo sapiens CAP-GLY domain containing
linker protein 2 protein.
Length = 1011
Score = 133 bits (322), Expect = 7e-31
Identities = 70/153 (45%), Positives = 95/153 (62%), Gaps = 11/153 (7%)
Frame = +2
Query: 452 FIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGV 631
F++GERVWV G KPG + Y+GETQFAPG+WAG+VLD+P+GKNDG+V GVRYF+CP +G+
Sbjct: 79 FVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECPALQGI 138
Query: 632 FSRLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRT--LSP------NGSIRS 787
F+R ++LTR P A + DA V + SG A P T + P N S+++
Sbjct: 139 FTRPSKLTRQPTAEGSGSDAHSVESLTAQNLSLHSGTATPPLTSRVIPLRESVLNSSVKT 198
Query: 788 IVSSKMNASISTTT---NGDIRTGDRVIVSSXR 877
S N S S + D+R GDRV+V +
Sbjct: 199 GNESGSNLSDSGSVKRGEKDLRLGDRVLVGGTK 231
Score = 104 bits (250), Expect = 4e-22
Identities = 44/78 (56%), Positives = 58/78 (74%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV VGGTK G + Y+GET FA GEW G+ LDEP+GKNDG+VAG RYFQCP K G+F+
Sbjct: 221 LGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGLFA 280
Query: 638 RLTRLTRVPFAIHTPHDA 691
+ ++ R+ F +P A
Sbjct: 281 PIHKVIRIGFPSTSPAKA 298
>AF041059-1|AAB96784.1| 419|Homo sapiens similar to KIAA0291: DDBJ
Accession Number AB006629, restin and CLIP-170 protein.
Length = 419
Score = 133 bits (322), Expect = 7e-31
Identities = 70/153 (45%), Positives = 95/153 (62%), Gaps = 11/153 (7%)
Frame = +2
Query: 452 FIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGV 631
F++GERVWV G KPG + Y+GETQFAPG+WAG+VLD+P+GKNDG+V GVRYF+CP +G+
Sbjct: 38 FVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECPALQGI 97
Query: 632 FSRLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRT--LSP------NGSIRS 787
F+R ++LTR P A + DA V + SG A P T + P N S+++
Sbjct: 98 FTRPSKLTRQPTAEGSGSDAHSVESLTAQNLSLHSGTATPPLTSRVIPLRESVLNSSVKT 157
Query: 788 IVSSKMNASISTTT---NGDIRTGDRVIVSSXR 877
S N S S + D+R GDRV+V +
Sbjct: 158 GNESGSNLSDSGSVKRGEKDLRLGDRVLVGGTK 190
Score = 104 bits (250), Expect = 4e-22
Identities = 44/78 (56%), Positives = 58/78 (74%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV VGGTK G + Y+GET FA GEW G+ LDEP+GKNDG+VAG RYFQCP K G+F+
Sbjct: 180 LGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGLFA 239
Query: 638 RLTRLTRVPFAIHTPHDA 691
+ ++ R+ F +P A
Sbjct: 240 PIHKVIRIGFPSTSPAKA 257
>AC005015-1|AAF03524.1| 1046|Homo sapiens KIAA0291; similar rodent
cytoplasmic linker protein CLIP-115 and restin protein.
Length = 1046
Score = 133 bits (322), Expect = 7e-31
Identities = 70/153 (45%), Positives = 95/153 (62%), Gaps = 11/153 (7%)
Frame = +2
Query: 452 FIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGV 631
F++GERVWV G KPG + Y+GETQFAPG+WAG+VLD+P+GKNDG+V GVRYF+CP +G+
Sbjct: 79 FVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECPALQGI 138
Query: 632 FSRLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRT--LSP------NGSIRS 787
F+R ++LTR P A + DA V + SG A P T + P N S+++
Sbjct: 139 FTRPSKLTRQPTAEGSGSDAHSVESLTAQNLSLHSGTATPPLTSRVIPLRESVLNSSVKT 198
Query: 788 IVSSKMNASISTTT---NGDIRTGDRVIVSSXR 877
S N S S + D+R GDRV+V +
Sbjct: 199 GNESGSNLSDSGSVKRGEKDLRLGDRVLVGGTK 231
Score = 104 bits (250), Expect = 4e-22
Identities = 44/78 (56%), Positives = 58/78 (74%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV VGGTK G + Y+GET FA GEW G+ LDEP+GKNDG+VAG RYFQCP K G+F+
Sbjct: 221 LGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGLFA 280
Query: 638 RLTRLTRVPFAIHTPHDA 691
+ ++ R+ F +P A
Sbjct: 281 PIHKVIRIGFPSTSPAKA 298
>AB006629-1|BAA22960.2| 1024|Homo sapiens KIAA0291 protein.
Length = 1024
Score = 133 bits (322), Expect = 7e-31
Identities = 70/153 (45%), Positives = 95/153 (62%), Gaps = 11/153 (7%)
Frame = +2
Query: 452 FIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGV 631
F++GERVWV G KPG + Y+GETQFAPG+WAG+VLD+P+GKNDG+V GVRYF+CP +G+
Sbjct: 92 FVVGERVWVNGVKPGVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECPALQGI 151
Query: 632 FSRLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRT--LSP------NGSIRS 787
F+R ++LTR P A + DA V + SG A P T + P N S+++
Sbjct: 152 FTRPSKLTRQPTAEGSGSDAHSVESLTAQNLSLHSGTATPPLTSRVIPLRESVLNSSVKT 211
Query: 788 IVSSKMNASISTTT---NGDIRTGDRVIVSSXR 877
S N S S + D+R GDRV+V +
Sbjct: 212 GNESGSNLSDSGSVKRGEKDLRLGDRVLVGGTK 244
Score = 104 bits (250), Expect = 4e-22
Identities = 44/78 (56%), Positives = 58/78 (74%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV VGGTK G + Y+GET FA GEW G+ LDEP+GKNDG+VAG RYFQCP K G+F+
Sbjct: 234 LGDRVLVGGTKTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPKFGLFA 293
Query: 638 RLTRLTRVPFAIHTPHDA 691
+ ++ R+ F +P A
Sbjct: 294 PIHKVIRIGFPSTSPAKA 311
>X64838-1|CAA46050.1| 1427|Homo sapiens restin protein.
Length = 1427
Score = 123 bits (296), Expect = 1e-27
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = +2
Query: 410 SSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSV 589
S+ S E D F +GERVWV G KPG I ++GETQFAPG+WAGIVLDEPIGKNDGSV
Sbjct: 44 STPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
Query: 590 AGVRYFQCPEKRGVFSRLTRLTR 658
AGVRYFQC +G+F+R ++LTR
Sbjct: 104 AGVRYFQCEPLKGIFTRPSKLTR 126
Score = 104 bits (250), Expect = 4e-22
Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
IG+RV VGGTK G + ++GET FA GEW G+ LDEP+GKNDG+VAG RYFQC K G+F+
Sbjct: 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFA 273
Query: 638 RLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPK-RTLSPNGSIRSIVSSK 802
+ ++T++ F TP A + + S P +LS S+ S VSS+
Sbjct: 274 PVHKVTKIGFPSTTPAKAKANAVRRVMATTSASLKRSPSASSLSSMSSVASSVSSR 329
>M97501-1|AAA35693.1| 1392|Homo sapiens cytoplasmic linker
protein-170 alpha-2 protein.
Length = 1392
Score = 123 bits (296), Expect = 1e-27
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = +2
Query: 410 SSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSV 589
S+ S E D F +GERVWV G KPG I ++GETQFAPG+WAGIVLDEPIGKNDGSV
Sbjct: 44 STPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
Query: 590 AGVRYFQCPEKRGVFSRLTRLTR 658
AGVRYFQC +G+F+R ++LTR
Sbjct: 104 AGVRYFQCEPLKGIFTRPSKLTR 126
Score = 104 bits (250), Expect = 4e-22
Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
IG+RV VGGTK G + ++GET FA GEW G+ LDEP+GKNDG+VAG RYFQC K G+F+
Sbjct: 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFA 273
Query: 638 RLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPK-RTLSPNGSIRSIVSSK 802
+ ++T++ F TP A + + S P +LS S+ S VSS+
Sbjct: 274 PVHKVTKIGFPSTTPAKAKANAVRRVMATTSASLKRSPSASSLSSMSSVASSVSSR 329
>BC126305-1|AAI26306.1| 1438|Homo sapiens CLIP1 protein protein.
Length = 1438
Score = 123 bits (296), Expect = 1e-27
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = +2
Query: 410 SSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSV 589
S+ S E D F +GERVWV G KPG I ++GETQFAPG+WAGIVLDEPIGKNDGSV
Sbjct: 44 STPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
Query: 590 AGVRYFQCPEKRGVFSRLTRLTR 658
AGVRYFQC +G+F+R ++LTR
Sbjct: 104 AGVRYFQCEPLKGIFTRPSKLTR 126
Score = 104 bits (250), Expect = 4e-22
Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
IG+RV VGGTK G + ++GET FA GEW G+ LDEP+GKNDG+VAG RYFQC K G+F+
Sbjct: 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFA 273
Query: 638 RLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPK-RTLSPNGSIRSIVSSK 802
+ ++T++ F TP A + + S P +LS S+ S VSS+
Sbjct: 274 PVHKVTKIGFPSTTPAKAKANAVRRVMATTSASLKRSPSASSLSSMSSVASSVSSR 329
>BC117209-1|AAI17210.1| 1438|Homo sapiens CLIP1 protein protein.
Length = 1438
Score = 123 bits (296), Expect = 1e-27
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = +2
Query: 410 SSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSV 589
S+ S E D F +GERVWV G KPG I ++GETQFAPG+WAGIVLDEPIGKNDGSV
Sbjct: 44 STPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
Query: 590 AGVRYFQCPEKRGVFSRLTRLTR 658
AGVRYFQC +G+F+R ++LTR
Sbjct: 104 AGVRYFQCEPLKGIFTRPSKLTR 126
Score = 104 bits (250), Expect = 4e-22
Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
IG+RV VGGTK G + ++GET FA GEW G+ LDEP+GKNDG+VAG RYFQC K G+F+
Sbjct: 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFA 273
Query: 638 RLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPK-RTLSPNGSIRSIVSSK 802
+ ++T++ F TP A + + S P +LS S+ S VSS+
Sbjct: 274 PVHKVTKIGFPSTTPAKAKANAVRRVMATTSASLKRSPSASSLSSMSSVASSVSSR 329
>BC114213-1|AAI14214.1| 1392|Homo sapiens CAP-GLY domain containing
linker protein 1 protein.
Length = 1392
Score = 123 bits (296), Expect = 1e-27
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = +2
Query: 410 SSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSV 589
S+ S E D F +GERVWV G KPG I ++GETQFAPG+WAGIVLDEPIGKNDGSV
Sbjct: 44 STPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
Query: 590 AGVRYFQCPEKRGVFSRLTRLTR 658
AGVRYFQC +G+F+R ++LTR
Sbjct: 104 AGVRYFQCEPLKGIFTRPSKLTR 126
Score = 104 bits (249), Expect = 5e-22
Identities = 55/114 (48%), Positives = 74/114 (64%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
IG+RV VGGTK G + ++GET FA GEW G+ LDEP+GKNDG+VAG RYFQC K G+F+
Sbjct: 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFA 273
Query: 638 RLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRTLSPNGSIRSIVSS 799
+ ++T++ F TP A A +V + +A KR SP+ S S +SS
Sbjct: 274 PVHKVTKIGFPSTTPAKAK----ANAVRRVMATTSASLKR--SPSASSLSSMSS 321
>BC062543-1|AAH62543.1| 653|Homo sapiens CLIP1 protein protein.
Length = 653
Score = 123 bits (296), Expect = 1e-27
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = +2
Query: 410 SSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSV 589
S+ S E D F +GERVWV G KPG I ++GETQFAPG+WAGIVLDEPIGKNDGSV
Sbjct: 44 STPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
Query: 590 AGVRYFQCPEKRGVFSRLTRLTR 658
AGVRYFQC +G+F+R ++LTR
Sbjct: 104 AGVRYFQCEPLKGIFTRPSKLTR 126
Score = 104 bits (250), Expect = 4e-22
Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
IG+RV VGGTK G + ++GET FA GEW G+ LDEP+GKNDG+VAG RYFQC K G+F+
Sbjct: 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFA 273
Query: 638 RLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPK-RTLSPNGSIRSIVSSK 802
+ ++T++ F TP A + + S P +LS S+ S VSS+
Sbjct: 274 PVHKVTKIGFPSTTPAKAKANAVRRVMATTSASLKRSPSASSLSSMSSVASSVSSR 329
>BC047895-1|AAH47895.1| 449|Homo sapiens CLIP1 protein protein.
Length = 449
Score = 123 bits (296), Expect = 1e-27
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = +2
Query: 410 SSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSV 589
S+ S E D F +GERVWV G KPG I ++GETQFAPG+WAGIVLDEPIGKNDGSV
Sbjct: 44 STPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
Query: 590 AGVRYFQCPEKRGVFSRLTRLTR 658
AGVRYFQC +G+F+R ++LTR
Sbjct: 104 AGVRYFQCEPLKGIFTRPSKLTR 126
Score = 105 bits (252), Expect = 2e-22
Identities = 61/135 (45%), Positives = 86/135 (63%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
IG+RV VGGTK G + ++GET FA GEW G+ LDEP+GKNDG+VAG RYFQC K G+F+
Sbjct: 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFA 273
Query: 638 RLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRTLSPNGSIRSIVSSKMNASI 817
+ ++T++ F TP A A +V + +A KR SP+ S S +SS + +S+
Sbjct: 274 PVHKVTKIGFPSTTPAKAK----ANAVRRVMATTSASLKR--SPSASSLSSMSS-VASSV 326
Query: 818 STTTNGDIRTGDRVI 862
S+ + RTG V+
Sbjct: 327 SSRPS---RTGLHVL 338
>BC039081-1|AAH39081.1| 350|Homo sapiens CLIP1 protein protein.
Length = 350
Score = 123 bits (296), Expect = 1e-27
Identities = 55/83 (66%), Positives = 65/83 (78%)
Frame = +2
Query: 410 SSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSV 589
S+ S E D F +GERVWV G KPG I ++GETQFAPG+WAGIVLDEPIGKNDGSV
Sbjct: 44 STPSSETQEEFVDDFRVGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSV 103
Query: 590 AGVRYFQCPEKRGVFSRLTRLTR 658
AGVRYFQC +G+F+R ++LTR
Sbjct: 104 AGVRYFQCEPLKGIFTRPSKLTR 126
Score = 104 bits (250), Expect = 4e-22
Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
IG+RV VGGTK G + ++GET FA GEW G+ LDEP+GKNDG+VAG RYFQC K G+F+
Sbjct: 214 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFA 273
Query: 638 RLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPK-RTLSPNGSIRSIVSSK 802
+ ++T++ F TP A + + S P +LS S+ S VSS+
Sbjct: 274 PVHKVTKIGFPSTTPAKAKANAVRRVMATTSASLKRSPSASSLSSMSSVASSVSSR 329
>BC014486-1|AAH14486.2| 438|Homo sapiens CLIP3 protein protein.
Length = 438
Score = 90.2 bits (214), Expect = 9e-18
Identities = 45/111 (40%), Positives = 61/111 (54%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G++V V G K G + + G+T FAPG W GI LD+P GK+DGSV GVRYF CP + GVF+
Sbjct: 309 VGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFA 368
Query: 638 RLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRTLSPNGSIRSI 790
+R+ R+ + +P D+ V P RT S SI
Sbjct: 369 PASRIQRIGGSTDSPGDSVGAKKVHQVTMTQPKRTFTTVRTPKDIASENSI 419
Score = 86.6 bits (205), Expect = 1e-16
Identities = 34/67 (50%), Positives = 51/67 (76%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV + G K G + + G T+FA G+W G+ LDEP GKNDGSV GVRYF CP K+G+F+
Sbjct: 187 LGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFA 246
Query: 638 RLTRLTR 658
++++++
Sbjct: 247 SVSKISK 253
>BC013116-1|AAH13116.2| 547|Homo sapiens CAP-GLY domain containing
linker protein 3 protein.
Length = 547
Score = 90.2 bits (214), Expect = 9e-18
Identities = 45/111 (40%), Positives = 61/111 (54%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G++V V G K G + + G+T FAPG W GI LD+P GK+DGSV GVRYF CP + GVF+
Sbjct: 418 VGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFA 477
Query: 638 RLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRTLSPNGSIRSI 790
+R+ R+ + +P D+ V P RT S SI
Sbjct: 478 PASRIQRIGGSTDSPGDSVGAKKVHQVTMTQPKRTFTTVRTPKDIASENSI 528
Score = 86.6 bits (205), Expect = 1e-16
Identities = 34/67 (50%), Positives = 51/67 (76%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV + G K G + + G T+FA G+W G+ LDEP GKNDGSV GVRYF CP K+G+F+
Sbjct: 296 LGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFA 355
Query: 638 RLTRLTR 658
++++++
Sbjct: 356 SVSKISK 362
>AL117468-1|CAB55943.1| 161|Homo sapiens hypothetical protein
protein.
Length = 161
Score = 90.2 bits (214), Expect = 9e-18
Identities = 45/111 (40%), Positives = 61/111 (54%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G++V V G K G + + G+T FAPG W GI LD+P GK+DGSV GVRYF CP + GVF+
Sbjct: 32 VGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFA 91
Query: 638 RLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRTLSPNGSIRSI 790
+R+ R+ + +P D+ V P RT S SI
Sbjct: 92 PASRIQRIGGSTDSPGDSVGAKKVHQVTMTQPKRTFTTVRTPKDIASENSI 142
>AJ427922-1|CAD20873.1| 547|Homo sapiens CLIP-170-related protein
protein.
Length = 547
Score = 90.2 bits (214), Expect = 9e-18
Identities = 45/111 (40%), Positives = 61/111 (54%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G++V V G K G + + G+T FAPG W GI LD+P GK+DGSV GVRYF CP + GVF+
Sbjct: 418 VGDQVLVAGQKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTCPPRHGVFA 477
Query: 638 RLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRTLSPNGSIRSI 790
+R+ R+ + +P D+ V P RT S SI
Sbjct: 478 PASRIQRIGGSTDSPGDSVGAKKVHQVTMTQPKRTFTTVRTPKDIASENSI 528
Score = 86.6 bits (205), Expect = 1e-16
Identities = 34/67 (50%), Positives = 51/67 (76%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV + G K G + + G T+FA G+W G+ LDEP GKNDGSV GVRYF CP K+G+F+
Sbjct: 296 LGDRVLLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPPKQGLFA 355
Query: 638 RLTRLTR 658
++++++
Sbjct: 356 SVSKISK 362
>BC126167-1|AAI26168.1| 705|Homo sapiens CAP-GLY domain containing
linker protein family, member 4 protein.
Length = 705
Score = 83.8 bits (198), Expect = 7e-16
Identities = 42/102 (41%), Positives = 60/102 (58%)
Frame = +2
Query: 389 SEAGLRRSSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPI 568
+ AGL S+ + + +GERV V G + G I + G T FAPG W GI L++P
Sbjct: 464 ASAGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPH 523
Query: 569 GKNDGSVAGVRYFQCPEKRGVFSRLTRLTRVPFAIHTPHDAS 694
GKNDGSV GV+YF C + G+F+ +R+ RV ++ T + S
Sbjct: 524 GKNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEIS 565
Score = 81.0 bits (191), Expect = 5e-15
Identities = 33/67 (49%), Positives = 50/67 (74%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV + G K G + + G T+FA G+WAGI LDEP GKN+GSV V+YF+C K G+F+
Sbjct: 285 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFA 344
Query: 638 RLTRLTR 658
L+++++
Sbjct: 345 PLSKISK 351
Score = 58.4 bits (135), Expect = 3e-08
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +2
Query: 371 KHARRLSEAGLRRS--SDHSVILTEDTDSFIIGERVWV-GGTKPGQIAYIGETQFAPGEW 541
++A S+A LRRS S + E + G +V + + G + Y+G T FA G W
Sbjct: 594 RNAFSKSKAALRRSWSSTPTAGGIEGSVKLHEGSQVLLTSSNEMGTVRYVGPTDFASGIW 653
Query: 542 AGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTRLT 655
G+ L GKNDGSV RYF C GV R +R+T
Sbjct: 654 LGLELRSAKGKNDGSVGDKRYFTCKPNHGVLVRPSRVT 691
>AK024722-1|BAB14974.1| 492|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21069 fis, clone CAS01594. ).
Length = 492
Score = 83.8 bits (198), Expect = 7e-16
Identities = 42/102 (41%), Positives = 60/102 (58%)
Frame = +2
Query: 389 SEAGLRRSSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPI 568
+ AGL S+ + + +GERV V G + G I + G T FAPG W GI L++P
Sbjct: 357 ASAGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPH 416
Query: 569 GKNDGSVAGVRYFQCPEKRGVFSRLTRLTRVPFAIHTPHDAS 694
GKNDGSV GV+YF C + G+F+ +R+ RV ++ T + S
Sbjct: 417 GKNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEIS 458
Score = 80.6 bits (190), Expect = 7e-15
Identities = 33/67 (49%), Positives = 50/67 (74%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV + G K G + + G T+FA G+WAGI LDEP GKN+GSV V+YF+C K G+F+
Sbjct: 178 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPGGKNNGSVGKVQYFKCAPKYGIFA 237
Query: 638 RLTRLTR 658
L+++++
Sbjct: 238 PLSKISK 244
>AC093593-1|AAX88898.1| 614|Homo sapiens unknown protein.
Length = 614
Score = 83.8 bits (198), Expect = 7e-16
Identities = 42/102 (41%), Positives = 60/102 (58%)
Frame = +2
Query: 389 SEAGLRRSSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPI 568
+ AGL S+ + + +GERV V G + G I + G T FAPG W GI L++P
Sbjct: 373 ASAGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPH 432
Query: 569 GKNDGSVAGVRYFQCPEKRGVFSRLTRLTRVPFAIHTPHDAS 694
GKNDGSV GV+YF C + G+F+ +R+ RV ++ T + S
Sbjct: 433 GKNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEIS 474
Score = 81.0 bits (191), Expect = 5e-15
Identities = 33/67 (49%), Positives = 50/67 (74%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV + G K G + + G T+FA G+WAGI LDEP GKN+GSV V+YF+C K G+F+
Sbjct: 194 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFA 253
Query: 638 RLTRLTR 658
L+++++
Sbjct: 254 PLSKISK 260
Score = 58.4 bits (135), Expect = 3e-08
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +2
Query: 371 KHARRLSEAGLRRS--SDHSVILTEDTDSFIIGERVWV-GGTKPGQIAYIGETQFAPGEW 541
++A S+A LRRS S + E + G +V + + G + Y+G T FA G W
Sbjct: 503 RNAFSKSKAALRRSWSSTPTAGGIEGSVKLHEGSQVLLTSSNEMGTVRYVGPTDFASGIW 562
Query: 542 AGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTRLT 655
G+ L GKNDGSV RYF C GV R +R+T
Sbjct: 563 LGLELRSAKGKNDGSVGDKRYFTCKPNHGVLVRPSRVT 600
>AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 82.6 bits (195), Expect = 2e-15
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +2
Query: 422 SVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVR 601
SV ++ F IG+RV +G +PG + + GET FA G WAG+ LD+P G N+G+ G+
Sbjct: 2487 SVPTADELFDFHIGDRVLIGNVQPGILRFKGETSFAKGFWAGVELDKPEGNNNGTYDGIA 2546
Query: 602 YFQCPEKRGVFSRLTRLTRVP 664
YF+C EK G+F+ +++ +P
Sbjct: 2547 YFECKEKHGIFAPPQKISHIP 2567
>AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 82.6 bits (195), Expect = 2e-15
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +2
Query: 422 SVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVR 601
SV ++ F IG+RV +G +PG + + GET FA G WAG+ LD+P G N+G+ G+
Sbjct: 2487 SVPTADELFDFHIGDRVLIGNVQPGILRFKGETSFAKGFWAGVELDKPEGNNNGTYDGIA 2546
Query: 602 YFQCPEKRGVFSRLTRLTRVP 664
YF+C EK G+F+ +++ +P
Sbjct: 2547 YFECKEKHGIFAPPQKISHIP 2567
>AL390718-2|CAI14834.1| 1291|Homo sapiens centrosomal protein 350kDa
protein.
Length = 1291
Score = 82.6 bits (195), Expect = 2e-15
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +2
Query: 422 SVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVR 601
SV ++ F IG+RV +G +PG + + GET FA G WAG+ LD+P G N+G+ G+
Sbjct: 661 SVPTADELFDFHIGDRVLIGNVQPGILRFKGETSFAKGFWAGVELDKPEGNNNGTYDGIA 720
Query: 602 YFQCPEKRGVFSRLTRLTRVP 664
YF+C EK G+F+ +++ +P
Sbjct: 721 YFECKEKHGIFAPPQKISHIP 741
>AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 82.6 bits (195), Expect = 2e-15
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +2
Query: 422 SVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVR 601
SV ++ F IG+RV +G +PG + + GET FA G WAG+ LD+P G N+G+ G+
Sbjct: 2487 SVPTADELFDFHIGDRVLIGNVQPGILRFKGETSFAKGFWAGVELDKPEGNNNGTYDGIA 2546
Query: 602 YFQCPEKRGVFSRLTRLTRVP 664
YF+C EK G+F+ +++ +P
Sbjct: 2547 YFECKEKHGIFAPPQKISHIP 2567
>AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated
protein 350 protein.
Length = 3117
Score = 82.6 bits (195), Expect = 2e-15
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +2
Query: 422 SVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVR 601
SV ++ F IG+RV +G +PG + + GET FA G WAG+ LD+P G N+G+ G+
Sbjct: 2487 SVPTADELFDFHIGDRVLIGNVQPGILRFKGETSFAKGFWAGVELDKPEGNNNGTYDGIA 2546
Query: 602 YFQCPEKRGVFSRLTRLTRVP 664
YF+C EK G+F+ +++ +P
Sbjct: 2547 YFECKEKHGIFAPPQKISHIP 2567
>AB007949-1|BAA32325.2| 1288|Homo sapiens KIAA0480 protein protein.
Length = 1288
Score = 82.6 bits (195), Expect = 2e-15
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +2
Query: 422 SVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVR 601
SV ++ F IG+RV +G +PG + + GET FA G WAG+ LD+P G N+G+ G+
Sbjct: 658 SVPTADELFDFHIGDRVLIGNVQPGILRFKGETSFAKGFWAGVELDKPEGNNNGTYDGIA 717
Query: 602 YFQCPEKRGVFSRLTRLTRVP 664
YF+C EK G+F+ +++ +P
Sbjct: 718 YFECKEKHGIFAPPQKISHIP 738
>AB209042-1|BAD92279.1| 724|Homo sapiens Hypothetical protein
FLJ32705 variant protein.
Length = 724
Score = 81.8 bits (193), Expect = 3e-15
Identities = 38/79 (48%), Positives = 52/79 (65%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+GERV V G + G I + G T FAPG W GI L++P GKNDGSV GV+YF C + G+F+
Sbjct: 506 LGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYGIFA 565
Query: 638 RLTRLTRVPFAIHTPHDAS 694
+R+ RV ++ T + S
Sbjct: 566 PPSRVQRVTDSLDTLSEIS 584
Score = 81.0 bits (191), Expect = 5e-15
Identities = 33/67 (49%), Positives = 50/67 (74%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV + G K G + + G T+FA G+WAGI LDEP GKN+GSV V+YF+C K G+F+
Sbjct: 286 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFA 345
Query: 638 RLTRLTR 658
L+++++
Sbjct: 346 PLSKISK 352
Score = 58.4 bits (135), Expect = 3e-08
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +2
Query: 371 KHARRLSEAGLRRS--SDHSVILTEDTDSFIIGERVWV-GGTKPGQIAYIGETQFAPGEW 541
++A S+A LRRS S + E + G +V + + G + Y+G T FA G W
Sbjct: 613 RNAFSKSKAALRRSWSSTPTAGGIEGSVKLHEGSQVLLTSSNEMGTVRYVGPTDFASGIW 672
Query: 542 AGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTRLT 655
G+ L GKNDGSV RYF C GV R +R+T
Sbjct: 673 LGLELRSAKGKNDGSVGDKRYFTCKPNHGVLVRPSRVT 710
>BC015310-1|AAH15310.2| 554|Homo sapiens CLIP4 protein protein.
Length = 554
Score = 81.0 bits (191), Expect = 5e-15
Identities = 33/67 (49%), Positives = 50/67 (74%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV + G K G + + G T+FA G+WAGI LDEP GKN+GSV V+YF+C K G+F+
Sbjct: 238 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFA 297
Query: 638 RLTRLTR 658
L+++++
Sbjct: 298 PLSKISK 304
Score = 78.6 bits (185), Expect = 3e-14
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Frame = +2
Query: 389 SEAGLRRSSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAP--GEWAGIVLDE 562
+ AGL S+ + + +GERV V G + G I + G T FAP G W GI L++
Sbjct: 417 ASAGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPVLGYWYGIELEK 476
Query: 563 PIGKNDGSVAGVRYFQCPEKRGVFSRLTRLTRVPFAIHTPHDAS 694
P GKNDGSV GV+YF C + G+F+ +R+ RV ++ T + S
Sbjct: 477 PHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEIS 520
>AK057267-1|BAB71403.1| 345|Homo sapiens protein ( Homo sapiens
cDNA FLJ32705 fis, clone TESTI2000600, weakly similar to
RESTIN. ).
Length = 345
Score = 81.0 bits (191), Expect = 5e-15
Identities = 33/67 (49%), Positives = 50/67 (74%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV + G K G + + G T+FA G+WAGI LDEP GKN+GSV V+YF+C K G+F+
Sbjct: 135 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFA 194
Query: 638 RLTRLTR 658
L+++++
Sbjct: 195 PLSKISK 201
>AF433661-1|AAP97312.1| 601|Homo sapiens unknown protein.
Length = 601
Score = 81.0 bits (191), Expect = 5e-15
Identities = 33/67 (49%), Positives = 50/67 (74%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
+G+RV + G K G + + G T+FA G+WAGI LDEP GKN+GSV V+YF+C K G+F+
Sbjct: 285 LGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKCAPKYGIFA 344
Query: 638 RLTRLTR 658
L+++++
Sbjct: 345 PLSKISK 351
Score = 78.6 bits (185), Expect = 3e-14
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Frame = +2
Query: 389 SEAGLRRSSDHSVILTEDTDSFIIGERVWVGGTKPGQIAYIGETQFAP--GEWAGIVLDE 562
+ AGL S+ + + +GERV V G + G I + G T FAP G W GI L++
Sbjct: 464 ASAGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTNFAPVLGYWYGIELEK 523
Query: 563 PIGKNDGSVAGVRYFQCPEKRGVFSRLTRLTRVPFAIHTPHDAS 694
P GKNDGSV GV+YF C + G+F+ +R+ RV ++ T + S
Sbjct: 524 PHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEIS 567
>X98801-1|CAA67333.1| 1263|Homo sapiens dynactin protein.
Length = 1263
Score = 79.0 bits (186), Expect = 2e-14
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = +2
Query: 458 IGERVWV-GGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVF 634
+G RV V G G +AY+G T FA G+W G++LDE GKNDG+V G +YF C E G+F
Sbjct: 21 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIF 80
Query: 635 SRLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRTLSPNGSIRSIVSSKMNAS 814
R +++ T +P S A V +R + L+P + K
Sbjct: 81 VRQSQIQVFEDGADTTSPETPDSSASKVLKREGTDTTAKTSKLAPTARKTTTRRPKPTRP 140
Query: 815 ISTTTNG 835
ST G
Sbjct: 141 ASTGVAG 147
>AF086947-1|AAD03694.1| 1261|Homo sapiens dynactin 1 protein.
Length = 1261
Score = 77.4 bits (182), Expect = 6e-14
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = +2
Query: 458 IGERVWV-GGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVF 634
+G RV V G G +AY+G T FA G+W G++LDE GKNDG+V G +YF C E G+F
Sbjct: 12 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIF 71
Query: 635 SRLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRTLSPNGSIRSIVSSKMNAS 814
R +++ T +P S A V +R + T + +R + K +
Sbjct: 72 VRQSQIQVFEDGADTTSPETPDSSASKVLKREGTD------TTAKTSKLRGLKPKKAPTA 125
Query: 815 ISTTT 829
TTT
Sbjct: 126 RKTTT 130
>AF064205-1|AAD55811.1| 1278|Homo sapiens dynactin 1 p150 isoform
protein.
Length = 1278
Score = 77.4 bits (182), Expect = 6e-14
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Frame = +2
Query: 458 IGERVWV-GGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVF 634
+G RV V G G +AY+G T FA G+W G++LDE GKNDG+V G +YF C E G+F
Sbjct: 29 VGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTCDEGHGIF 88
Query: 635 SRLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPKRTLSPNGSIRSIVSSKMNAS 814
R +++ T +P S A V +R + T + +R + K +
Sbjct: 89 VRQSQIQVFEDGADTTSPETPDSSASKVLKREGTD------TTAKTSKLRGLKPKKAPTA 142
Query: 815 ISTTT 829
TTT
Sbjct: 143 RKTTT 147
>D49738-1|BAA08572.1| 193|Homo sapiens cytoskeleton associated
protein protein.
Length = 193
Score = 69.7 bits (163), Expect = 1e-11
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +2
Query: 368 EKHARRLSEAGLRRSSDHSVILTEDTDSFIIGER--VWVGGTKP--GQIAYIGETQFAPG 535
E+ A++ +EA R + + + S +G R V G P G + Y+G T F PG
Sbjct: 85 EERAQQEAEAAQRLAEEKA-----QASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPG 139
Query: 536 EWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVF 634
W G+ DEP+GKNDGSV G RYF+C K G F
Sbjct: 140 YWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAF 172
>CR541971-1|CAG46769.1| 193|Homo sapiens CKAP1 protein.
Length = 193
Score = 69.7 bits (163), Expect = 1e-11
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +2
Query: 368 EKHARRLSEAGLRRSSDHSVILTEDTDSFIIGER--VWVGGTKP--GQIAYIGETQFAPG 535
E+ A++ +EA R + + + S +G R V G P G + Y+G T F PG
Sbjct: 85 EERAQQEAEAAQRLAEEKA-----QASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPG 139
Query: 536 EWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVF 634
W G+ DEP+GKNDGSV G RYF+C K G F
Sbjct: 140 YWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAF 172
>BT007424-1|AAP36092.1| 244|Homo sapiens cytoskeleton-associated
protein 1 protein.
Length = 244
Score = 69.7 bits (163), Expect = 1e-11
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +2
Query: 368 EKHARRLSEAGLRRSSDHSVILTEDTDSFIIGER--VWVGGTKP--GQIAYIGETQFAPG 535
E+ A++ +EA R + + + S +G R V G P G + Y+G T F PG
Sbjct: 136 EERAQQEAEAAQRLAEEKA-----QASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPG 190
Query: 536 EWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVF 634
W G+ DEP+GKNDGSV G RYF+C K G F
Sbjct: 191 YWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAF 223
>BC052812-1|AAH52812.1| 244|Homo sapiens tubulin folding cofactor B
protein.
Length = 244
Score = 69.7 bits (163), Expect = 1e-11
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +2
Query: 368 EKHARRLSEAGLRRSSDHSVILTEDTDSFIIGER--VWVGGTKP--GQIAYIGETQFAPG 535
E+ A++ +EA R + + + S +G R V G P G + Y+G T F PG
Sbjct: 136 EERAQQEAEAAQRLAEEKA-----QASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPG 190
Query: 536 EWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVF 634
W G+ DEP+GKNDGSV G RYF+C K G F
Sbjct: 191 YWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAF 223
>BC005969-1|AAH05969.1| 244|Homo sapiens tubulin folding cofactor B
protein.
Length = 244
Score = 69.7 bits (163), Expect = 1e-11
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +2
Query: 368 EKHARRLSEAGLRRSSDHSVILTEDTDSFIIGER--VWVGGTKP--GQIAYIGETQFAPG 535
E+ A++ +EA R + + + S +G R V G P G + Y+G T F PG
Sbjct: 136 EERAQQEAEAAQRLAEEKA-----QASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPG 190
Query: 536 EWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVF 634
W G+ DEP+GKNDGSV G RYF+C K G F
Sbjct: 191 YWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAF 223
>AF013488-1|AAB67716.1| 244|Homo sapiens tubulin folding cofactor B
protein.
Length = 244
Score = 69.7 bits (163), Expect = 1e-11
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +2
Query: 368 EKHARRLSEAGLRRSSDHSVILTEDTDSFIIGER--VWVGGTKP--GQIAYIGETQFAPG 535
E+ A++ +EA R + + + S +G R V G P G + Y+G T F PG
Sbjct: 136 EERAQQEAEAAQRLAEEKA-----QASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPG 190
Query: 536 EWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVF 634
W G+ DEP+GKNDGSV G RYF+C K G F
Sbjct: 191 YWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAF 223
>AD001527-3|AAB51182.1| 201|Homo sapiens hypothetical 28.2Da
protein from human chromosome 19 protein.
Length = 201
Score = 69.7 bits (163), Expect = 1e-11
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +2
Query: 368 EKHARRLSEAGLRRSSDHSVILTEDTDSFIIGER--VWVGGTKP--GQIAYIGETQFAPG 535
E+ A++ +EA R + + + S +G R V G P G + Y+G T F PG
Sbjct: 93 EERAQQEAEAAQRLAEEKA-----QASSIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPG 147
Query: 536 EWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVF 634
W G+ DEP+GKNDGSV G RYF+C K G F
Sbjct: 148 YWIGVRYDEPLGKNDGSVNGKRYFECQAKYGAF 180
>AF279865-1|AAF81263.1| 1826|Homo sapiens kinesin-like protein GAKIN
protein.
Length = 1826
Score = 67.3 bits (157), Expect = 7e-11
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +2
Query: 461 GERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSR 640
GE V VG K G + Y+G F G W G+ LD P GKNDGS+ G +YF+C G+ R
Sbjct: 1704 GEFVTVGAHKTGVVRYVGPADFQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYGLLVR 1763
Query: 641 LTRLTR 658
+R+ R
Sbjct: 1764 PSRVRR 1769
>AB014539-1|BAA31614.3| 1835|Homo sapiens KIAA0639 protein protein.
Length = 1835
Score = 67.3 bits (157), Expect = 7e-11
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +2
Query: 461 GERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSR 640
GE V VG K G + Y+G F G W G+ LD P GKNDGS+ G +YF+C G+ R
Sbjct: 1713 GEFVTVGAHKTGVVRYVGPADFQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYGLLVR 1772
Query: 641 LTRLTR 658
+R+ R
Sbjct: 1773 PSRVRR 1778
>AB209115-1|BAD92352.1| 1065|Homo sapiens restin isoform a variant
protein.
Length = 1065
Score = 52.0 bits (119), Expect = 3e-06
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +2
Query: 566 IGKNDGSVAGVRYFQCPEKRGVFSRLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAA 745
+GKNDG+VAG RYFQC K G+F+ + ++T++ F TP A + + S
Sbjct: 1 LGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKANAVRRVMATTSASLKR 60
Query: 746 RPK-RTLSPNGSIRSIVSSK 802
P +LS S+ S VSS+
Sbjct: 61 SPSASSLSSMSSVASSVSSR 80
>U61232-1|AAB17538.1| 527|Homo sapiens cofactor E protein.
Length = 527
Score = 39.9 bits (89), Expect = 0.012
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 455 IIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPI-GKNDGSVAGVRYFQCPEKRG 628
+IG RV V G + + + G G W G+ D P GK+DGS G YF+C G
Sbjct: 9 VIGRRVEVNG-EHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
>BT007086-1|AAP35749.1| 527|Homo sapiens tubulin-specific chaperone
e protein.
Length = 527
Score = 39.9 bits (89), Expect = 0.012
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 455 IIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPI-GKNDGSVAGVRYFQCPEKRG 628
+IG RV V G + + + G G W G+ D P GK+DGS G YF+C G
Sbjct: 9 VIGRRVEVNG-EHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
>BC008654-1|AAH08654.1| 527|Homo sapiens tubulin folding cofactor E
protein.
Length = 527
Score = 39.9 bits (89), Expect = 0.012
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 455 IIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPI-GKNDGSVAGVRYFQCPEKRG 628
+IG RV V G + + + G G W G+ D P GK+DGS G YF+C G
Sbjct: 9 VIGRRVEVNG-EHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
>AL672237-1|CAH72080.1| 527|Homo sapiens tubulin folding cofactor E
protein.
Length = 527
Score = 39.9 bits (89), Expect = 0.012
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 455 IIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPI-GKNDGSVAGVRYFQCPEKRG 628
+IG RV V G + + + G G W G+ D P GK+DGS G YF+C G
Sbjct: 9 VIGRRVEVNG-EHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
>AL357556-2|CAI15017.1| 527|Homo sapiens tubulin folding cofactor E
protein.
Length = 527
Score = 39.9 bits (89), Expect = 0.012
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 455 IIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPI-GKNDGSVAGVRYFQCPEKRG 628
+IG RV V G + + + G G W G+ D P GK+DGS G YF+C G
Sbjct: 9 VIGRRVEVNG-EHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
>BC012342-1|AAH12342.1| 953|Homo sapiens cylindromatosis (turban
tumor syndrome) protein.
Length = 953
Score = 35.1 bits (77), Expect = 0.34
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 494 GQIAYIGETQFAPGEWAGIVL-DEPIGKNDGSVAGVRYFQCPEKRGVFSRL 643
G I +IG+ AG+ L DE G DG+ G RYF C K+ +F +L
Sbjct: 483 GVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKL 533
>AL390718-4|CAI14836.1| 581|Homo sapiens centrosomal protein 350kDa
protein.
Length = 581
Score = 35.1 bits (77), Expect = 0.34
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 575 NDGSVAGVRYFQCPEKRGVFSRLTRLTRVP 664
N+G+ G+ YF+C EK G+F+ +++ +P
Sbjct: 2 NNGTYDGIAYFECKEKHGIFAPPQKISHIP 31
>AJ250014-1|CAB93533.1| 956|Homo sapiens cyld protein.
Length = 956
Score = 35.1 bits (77), Expect = 0.34
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 494 GQIAYIGETQFAPGEWAGIVL-DEPIGKNDGSVAGVRYFQCPEKRGVFSRL 643
G I +IG+ AG+ L DE G DG+ G RYF C K+ +F +L
Sbjct: 486 GVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKL 536
>AB020656-1|BAA74872.2| 960|Homo sapiens KIAA0849 protein protein.
Length = 960
Score = 35.1 bits (77), Expect = 0.34
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 494 GQIAYIGETQFAPGEWAGIVL-DEPIGKNDGSVAGVRYFQCPEKRGVFSRL 643
G I +IG+ AG+ L DE G DG+ G RYF C K+ +F +L
Sbjct: 490 GVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKL 540
>AJ406740-1|CAC10804.1| 80|Homo sapiens immunoglobulin kappa chain
variable region protein.
Length = 80
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -1
Query: 607 KITNTCH*SIVFTNWLVEYYPSPLSGSKLRFSDISDLSRLRTAYPNTFTNN 455
++T TC S +NWL Y P KL I D S L + P+ F+ +
Sbjct: 1 RVTITCRASQTISNWLAWYQQKPGKAPKLL---IYDASSLESGVPSRFSGS 48
>AJ406736-1|CAC10800.1| 81|Homo sapiens immunoglobulin kappa chain
variable region protein.
Length = 81
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -1
Query: 607 KITNTCH*SIVFTNWLVEYYPSPLSGSKLRFSDISDLSRLRTAYPNTFTNN 455
++T TC S +NWL Y P KL I D S L + P+ F+ +
Sbjct: 2 RVTITCRASQTISNWLAWYQQKPGKAPKLL---IYDASSLESGVPSRFSGS 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,238,306
Number of Sequences: 237096
Number of extensions: 2967293
Number of successful extensions: 9327
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 8796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9321
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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