Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_A09
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical... 41 0.001
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 4.4
Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical pr... 29 5.8
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 29 5.8
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z75710-1|CAB00023.1| 327|Caenorhabditis elegans Hypothetical pr... 28 7.7
L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical p... 28 7.7
AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical... 28 7.7
>Z77663-3|CAB01212.1| 229|Caenorhabditis elegans Hypothetical
protein F53F4.3 protein.
Length = 229
Score = 80.6 bits (190), Expect = 1e-15
Identities = 53/158 (33%), Positives = 74/158 (46%), Gaps = 8/158 (5%)
Frame = +2
Query: 191 GSSTDTLRKLSD----DLSRKHLSDLIEAEEDEVSSSLPDKPRTYRKXXXXXXXXXXXMD 358
G TD + L D D R H D+ ED S+ +K Y +
Sbjct: 59 GELTDGAKSLKDLGVRDGYRIHAVDVTGGNEDFKDESMVEK---YEMSDDTYGKRTDSVR 115
Query: 359 ALWEKHARRLSEAGLRRSSDHSVILTEDTDSFIIGER--VWVGG--TKPGQIAYIGETQF 526
A W+K + + ++ + E + ++G R V VG + G++AY+G T+F
Sbjct: 116 A-WKKKMQEEQGSAAPMENESDKLNEEAAKNIMVGNRCEVTVGAQMARRGEVAYVGATKF 174
Query: 527 APGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSR 640
G W G+ DEP+GKNDGSVAGVRYF C K G F R
Sbjct: 175 KEGVWVGVKYDEPVGKNDGSVAGVRYFDCDPKYGGFVR 212
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 66.1 bits (154), Expect = 3e-11
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +2
Query: 449 SFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRG 628
SF IG RV G++ + G+TQFA G+W G++LD GKN+G+V V+YF+C G
Sbjct: 2 SFEIGTRVKTSSGN-GRVVFCGQTQFAEGDWVGVILDTATGKNNGTVQNVQYFECEPNFG 60
Query: 629 VF 634
VF
Sbjct: 61 VF 62
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
IG V V G + Y+G G + GI L EP GK+DG+ GV YF G+F+
Sbjct: 21 IGRLVDVVNVGKGFLRYVGPIHGKDGMFCGIELLEPNGKHDGTFQGVSYFIATPYHGIFA 80
Query: 638 RLTRLT 655
+ R+T
Sbjct: 81 PIFRVT 86
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFS 637
IG V V G + Y+G G + GI L EP GK+DG+ GV YF G+F+
Sbjct: 21 IGRLVDVVNVGKGFLRYVGPIHGKDGMFCGIELLEPNGKHDGTFQGVSYFIATPYHGIFA 80
Query: 638 RLTRLT 655
+ R+T
Sbjct: 81 PIFRVT 86
>AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical
protein K07H8.1 protein.
Length = 493
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 458 IGERVWVGGTKPGQIAYIGETQ-FAPGEWAGIVLDEPI-GKNDGSVAGVRYFQCPEKRG 628
IG+RV + + + YIGE + W G+ D+P GK+DG V G RYFQ G
Sbjct: 3 IGQRVRIN-FEVATVRYIGEVDGYGSQRWVGLEWDDPTRGKHDGIVRGKRYFQTRHPNG 60
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -1
Query: 394 FAETTRVFLPKSIHRSSAERTAGGCFAICTRF 299
FAE R L +++ +++A +AGG FAI T+F
Sbjct: 3757 FAEKHRQVLNQALRQNNAVLSAGGPFAILTQF 3788
>Z22178-8|CAD82913.1| 307|Caenorhabditis elegans Hypothetical
protein F54C8.7b protein.
Length = 307
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 662 PFAIHTPHDASPVSDAGSVFERPPSGAARP 751
PFA T +D+SP SD+ R P+G P
Sbjct: 19 PFAPVTQNDSSPTSDSTETMSRIPTGIKVP 48
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 36 CITQVATTNYTPRYNHKLRFPNFKSRT 116
C T ATT TP + K +F F RT
Sbjct: 94 CFTNQATTTTTPTFRAKFKFTVFNQRT 120
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 36 CITQVATTNYTPRYNHKLRFPNFKSRT 116
C T ATT TP + K +F F RT
Sbjct: 101 CFTNQATTTTTPTFRAKFKFTVFNQRT 127
>Z75710-1|CAB00023.1| 327|Caenorhabditis elegans Hypothetical
protein D1081.2 protein.
Length = 327
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 161 PVETKISFSDGSSTDTLRKLSDDLSRKHLSDLIEAEEDEVSSSLPD 298
P T+ +F G+ + +RK RK LSD++ AE S S+P+
Sbjct: 135 PSRTEFTFDSGNGGNGMRK------RKMLSDVMSAESSNNSPSMPN 174
>L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical
protein C14B9.8 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +2
Query: 170 TKISFSDGSSTDTLRKLSDDLSRKHL--SDLIEAEEDEVSSSLPDKPRTYRK 319
+K+ F D S+ DTLR ++ + + L D EA+ +++++ P PRT R+
Sbjct: 631 SKMEFRDKSAEDTLRSVAAEKVQFTLLTEDATEAKNEKITT--PRGPRTLRR 680
>AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical
protein Y46G5A.10 protein.
Length = 732
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +2
Query: 617 EKRGVFSRLTRLTRVPFAIHTPHDASPVSDAGSVFERPPSGAARPK-RTLSPNGSIRS 787
EK SR P +H P++ A RP S RP RT SPN S S
Sbjct: 639 EKSRYLSRGVSTPHTPSEVHIPYNNPEKERAYQQSHRPSSPKRRPSGRTNSPNKSSSS 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,980,496
Number of Sequences: 27780
Number of extensions: 466076
Number of successful extensions: 1330
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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