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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P30_F_A08
         (825 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po...   132   8e-32
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po...    79   6e-16
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ...    61   2e-10
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ...    45   1e-05
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ...    44   2e-05
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc...    39   7e-04
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha...    39   0.001
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac...    36   0.005
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    35   0.016
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    29   1.1  
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid...    28   1.4  
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ...    28   1.8  
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c...    27   2.4  
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    27   3.2  
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos...    27   4.3  
SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces ...    26   5.6  
SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase |Schizos...    26   7.5  
SPAC29E6.08 |tbp1|tdf1, tbp, SPAC30.12|TATA-binding protein |Sch...    25   9.9  
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra...    25   9.9  

>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 492

 Score =  132 bits (318), Expect = 8e-32
 Identities = 68/181 (37%), Positives = 107/181 (59%), Gaps = 1/181 (0%)
 Frame = +2

Query: 200 YLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPP 379
           + C +AE  V  +     + +++     +V FYAPWCGHCK L PEY  AA  L+ D   
Sbjct: 17  FFCASAE--VPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKDG-- 72

Query: 380 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 559
           ++L +VDCTE G   C ++S+ GYPTL +F+ G+  S+Y+GPR+ + +VKYMR Q+ P+ 
Sbjct: 73  ISLVEVDCTEEG-DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTV 131

Query: 560 KELLTVADFEAFTSK-DEVVVVGFFEKESDLKGEFLKTADKLREEVTFAHSSANEVLEKT 736
           K  ++    E F  K D++ VV FF K+  L   + + A+ ++++  FA S   E+ +  
Sbjct: 132 KP-ISKDTLENFVEKADDLAVVAFF-KDQKLNDTYTEVAEVMKDDFVFAASDDKELAKSL 189

Query: 737 G 739
           G
Sbjct: 190 G 190



 Score = 69.3 bits (162), Expect = 6e-13
 Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
 Frame = +2

Query: 215 AEEDVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALA 391
           ++ED++ L   +F   V+ +    LV FYAPWCGHCK L P Y   A    +DD  V +A
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEY-SDDSNVVVA 411

Query: 392 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSS--EYNGPRESNGIVKYM--RAQVGPSS 559
           K+D TE   S     S+SG+PT+  F+  +  +   Y G R    +  ++   A   P  
Sbjct: 412 KIDATENDISV----SISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDKHASFEPIK 467

Query: 560 KE 565
           KE
Sbjct: 468 KE 469


>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 363

 Score = 79.4 bits (187), Expect = 6e-16
 Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
 Frame = +2

Query: 137 KAPAKFEMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGH 316
           + P  F +F +  F L+ G+         + ++L   +F   +     +LV+FYAPWCG+
Sbjct: 4   RIPTLFTLFLAC-FSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGY 62

Query: 317 CKRLKPEYAVAAGLLKTDDPPVALAKVDC-TEGGKSTCEQFSVSGYPTLKIF---RKGE- 481
           CK+L P Y   A  L +  P  A   VDC  +  ++ C Q+ V G+PT+K+     KG  
Sbjct: 63  CKKLVPTYQKLASNLHSLLPVTA---VDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSS 119

Query: 482 -LSSEYNGPRESNGIVKYMRAQVGPSSKELLT 574
             S++YNG R    + K++   + PS  ++LT
Sbjct: 120 LSSTDYNGDRSYKSLQKFVSDSI-PSKVKILT 150


>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 359

 Score = 60.9 bits (141), Expect = 2e-10
 Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 4/199 (2%)
 Frame = +2

Query: 224 DVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVD 400
           +V++L   +F   V+      LV FYA WCG+CKRL P Y     + K ++P V + K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFK-NEPNVEIVKIN 199

Query: 401 CTEGGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVGPSSKELLT 574
             +          V+ +PT+K F K +      Y G R    +++Y+  + G       T
Sbjct: 200 -ADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSGTQRSPDGT 258

Query: 575 VADFEAFTSKDEVVVVGFFEKESDLKGEFLKTADKLR-EEVTFAHSSANEVLEKTGYKNN 751
           +          +     F +  +  K   L+   +L  E+ +       +V EK     N
Sbjct: 259 LLSTAGRIPTFDEFAAEFLDMSNAAKEVVLEKVKQLALEDSSRWTKYYKKVFEKILNDEN 318

Query: 752 VVLYRPKRLQNKFEXSSVA 808
            V    KRL       S+A
Sbjct: 319 WVHKEAKRLSKLLRQKSIA 337



 Score = 58.8 bits (136), Expect = 9e-10
 Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
 Frame = +2

Query: 281 ALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTL 460
           AL+ FYA WCGHCK L P Y    G L  D   V + K+D  +      +++ ++G+PTL
Sbjct: 42  ALIEFYATWCGHCKSLAPVYE-ELGALFEDHNDVLIGKID-ADTHSDVADKYHITGFPTL 99

Query: 461 KIF-RKGELSSEYNGPRESNGIVKYMRAQVGPSSKELL 571
             F   G    +Y+  R+ + + +++  + G   ++++
Sbjct: 100 IWFPPDGSEPVQYSNARDVDSLTQFVSEKTGIKKRKIV 137


>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 632

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 31/118 (26%), Positives = 55/118 (46%)
 Frame = +2

Query: 281 ALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTL 460
           A VMF +    HC+      AV + + +  D  + +A+V+C E  K  C  F +  +PT 
Sbjct: 199 AFVMFVS--LKHCEDCFHWEAVWSSITRNTDERLKMAQVNCDE-EKEMCNHFHIKKFPTF 255

Query: 461 KIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFEAFTSKDEVVVVGFFE 634
           ++F +G  S +YNGP +   ++ Y   QV       +   D E+  +   V  +  ++
Sbjct: 256 RVF-QGFDSIQYNGPLKYQQLLSYSN-QVASYQAIKIEEGDIESIENSHPVFFLVLYD 311


>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 726

 Score = 44.4 bits (100), Expect = 2e-05
 Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
 Frame = +2

Query: 236 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP--EYAVAAGLLKTDDPPVALAKVDCTE 409
           LTD+D  + +S+  T  + +Y P CG CKRL P  +  V     + +       +VDC++
Sbjct: 31  LTDNDLESEVSK-GTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK 89

Query: 410 GGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVGPSSKELLTVAD 583
              S+C   ++   PTL +++ GE+  E  +        ++ ++   + P +   +  +D
Sbjct: 90  -ELSSCA--NIRAVPTLYLYQNGEIVEEVPFGASTSEASLLDFVETHLNPDTDPDIP-SD 145

Query: 584 FEAFTSKD 607
            +  T +D
Sbjct: 146 EDVLTDED 153



 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 30/134 (22%), Positives = 58/134 (43%)
 Frame = +2

Query: 242 DSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKS 421
           D+D  A L+  +   + FY+  C  C  +   +   A  ++     + +A ++C    K 
Sbjct: 288 DADIDAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRMRGK---LNVAHINCAVS-KR 343

Query: 422 TCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFEAFTS 601
            C+Q+S+  +PT  +F K E   EY G      +V +         +E+  +    A  +
Sbjct: 344 ACKQYSIQYFPTF-LFFKEEAFVEYVGLPNEGDLVSFAEEAANFEIREVELLDTVNAEKN 402

Query: 602 KDEVVVVGFFEKES 643
            D V  + F++ +S
Sbjct: 403 GD-VFFLYFYDDDS 415


>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 103

 Score = 39.1 bits (87), Expect = 7e-04
 Identities = 22/86 (25%), Positives = 38/86 (44%)
 Frame = +2

Query: 245 SDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKST 424
           S+F +++ Q    +V F+A WCG CK + P++   +             KVD  +  +  
Sbjct: 9   SEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQFSNTYS----DATFIKVDVDQLSEIA 64

Query: 425 CEQFSVSGYPTLKIFRKGELSSEYNG 502
            E   V   P+  +++ GE   E  G
Sbjct: 65  AEA-GVHAMPSFFLYKNGEKIEEIVG 89


>SPBC12D12.07c |trx2||mitochondrial thioredoxin
           Trx2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 121

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 23/78 (29%), Positives = 36/78 (46%)
 Frame = +2

Query: 248 DFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTC 427
           D++  +S     +V FYA WCG CK LKP        L   +   +   V+  +      
Sbjct: 27  DYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQNQKASFIAVN-ADKFSDIA 81

Query: 428 EQFSVSGYPTLKIFRKGE 481
           ++  V   PT+ +FRKG+
Sbjct: 82  QKNGVYALPTMVLFRKGQ 99


>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
           Txl1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 290

 Score = 36.3 bits (80), Expect = 0.005
 Identities = 20/62 (32%), Positives = 26/62 (41%)
 Frame = +2

Query: 296 YAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRK 475
           YA WCG CK + P ++  A   K   P    AKV+  E  +       V   PT   F  
Sbjct: 27  YADWCGPCKAISPLFSQLAS--KYASPKFVFAKVNVDE-QRQIASGLGVKAMPTFVFFEN 83

Query: 476 GE 481
           G+
Sbjct: 84  GK 85


>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 536

 Score = 34.7 bits (76), Expect = 0.016
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
 Frame = -1

Query: 723 TSLADE*AKVTSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLELGPT 544
           TSL    ++ +SS + S    +S   + S S +PT+++SS  + +S S+ V SS   G +
Sbjct: 81  TSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMS 140

Query: 543 WARMYLTMPLDSLGPLYSEES------SPFLNIFSVGYPD---------TENCSQVLLPP 409
            + +  +  + S    Y   S      S   +I S  Y D         T   S+V+ P 
Sbjct: 141 SSSLSHSSSVPSSSSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSYVSEVVTPT 200

Query: 408 SVQSTLASATGGSSVFKRPAATAYSGFSLL 319
           +  +  +S++  SS    P +++YS    L
Sbjct: 201 TTNNWNSSSSFTSSTSSTPISSSYSSSGTL 230


>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 534

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
 Frame = -1

Query: 693 TSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLEVKA--SKSATVRSSLELGPTWARMYLTM 520
           TSS  LS+    S   S S S + T T+SSL   +  S S++  S+     + +      
Sbjct: 205 TSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTAS 264

Query: 519 PLDSLGPLYSEESSPFLNIFSVGYPDTENCSQVLLPPSVQSTLASATGGSSVF 361
              S   + S  SS   +  S     + + S    P S  ST++S++  SS F
Sbjct: 265 SSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSF 317


>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
           peptidyl-prolyl cis-trans isomerase
           Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 610

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 732 FSRTSLADE*AKVTSSLNLSAVFRNSPFRSDSFSKNPT 619
           F+R SL  +  K ++  +L  +  N+P   +SF K+PT
Sbjct: 366 FTRLSLYQQAPKKSNLPSLDVIASNNPLVEESFQKDPT 403


>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 582

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
 Frame = -1

Query: 681 NLSAVFRNSPFRSDSFSKN---PTTTTSSLEVKASKSATVRSS-LELGPTWARMYLTMPL 514
           N      N PF+  S++ N   P+ TT   ++  S   TV S  L    +         +
Sbjct: 263 NFPTTVPNYPFQQPSYNPNALVPSYTTLVSQLPPSPCLTVSSGPLSTASSIPSNCSCPSV 322

Query: 513 DSLGPLYSEESSPFLNIFSVGYPDT 439
            S GP Y  E    +N ++ G P T
Sbjct: 323 KSSGPSYHAEQEVNVNSYNGGIPST 347


>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 244

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 17/73 (23%), Positives = 29/73 (39%)
 Frame = +2

Query: 284 LVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLK 463
           L+ FYAPW   CK++   +   A     D       K++  E      E F V+  P   
Sbjct: 24  LLNFYAPWAAPCKQMNQVFDQFA----KDTKNAVFLKIE-AEKFSDIAESFDVNAVPLFV 78

Query: 464 IFRKGELSSEYNG 502
           +    ++ +  +G
Sbjct: 79  LIHGAKVLARISG 91


>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1036

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -1

Query: 702 AKVTSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLEL 553
           A  TSS   S    NS   S   S +  +TTS+    +S S+TV SS  L
Sbjct: 206 ATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPL 255


>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 640

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 228 FSILQIPTFRLFYLNMIQPWSCF 296
           F  LQ+  FR  + N+++PW CF
Sbjct: 208 FYCLQLQMFRKMH-NIVRPWDCF 229


>SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 279

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
 Frame = +2

Query: 416 KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFE-- 589
           KS  E+   + Y  LK+  + E + +YN P   N     +       + +  T +D E  
Sbjct: 37  KSPLEKEIANEYEALKVTERKEDTQDYNEPELHNSNDPTVDLYADTYATQAATESDSELE 96

Query: 590 --AFTSKDEVVVVGFFEKESD-LKGEFLKT-ADKLREEVTF-AHSSANEVLEKTGYKNNV 754
              F+  DE     + E+  + LK EF +  A K +  + F    +  EV++ T     V
Sbjct: 97  DALFSQLDEFDDTAYREQRLEMLKKEFARVEAAKEKGHMQFLTVENEREVMDFTLSSKKV 156

Query: 755 VLY 763
           V++
Sbjct: 157 VIH 159


>SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 309

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 674 DKLREEVTFAHSSANEVLEKT 736
           DKL++ V  A SS +EV++KT
Sbjct: 248 DKLKKSVEMALSSVHEVIQKT 268


>SPAC29E6.08 |tbp1|tdf1, tbp, SPAC30.12|TATA-binding protein
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 231

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -1

Query: 177 NFSDPNISNLAGAFQQNRTNYSAFQPNLTNESIKERTRTGKLKI 46
           +F+ P  ++ A AF  N +      PN  NE+  E   +G  ++
Sbjct: 2   DFALPTTASQASAFMNNSSLTFPVLPNANNEATNETADSGDAEV 45


>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
           transporting Cta4 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1211

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 218 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKT 367
           EE V+D+ + D +AVL      L +  +P+   CK   P+  V A +L+T
Sbjct: 324 EEAVIDVDELDKNAVLFGGTRVLQVTQSPF---CKLKTPDNGVPAIVLRT 370


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,452,320
Number of Sequences: 5004
Number of extensions: 72326
Number of successful extensions: 254
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 404442380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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