Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_A06
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical pr... 129 2e-30
U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical pr... 129 2e-30
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 34 0.079
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 34 0.079
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 28 5.2
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 28 5.2
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 28 5.2
>U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical
protein E04F6.5b protein.
Length = 408
Score = 129 bits (311), Expect = 2e-30
Identities = 65/149 (43%), Positives = 93/149 (62%), Gaps = 1/149 (0%)
Frame = +3
Query: 222 SGARSAASEAQARN-GPRQSASFTLNLXRGRFEPTQVFPFPEPLSDDQRQMLQELVPPVE 398
S + +AA +A+ + S SF +NL RG+ QVFP+P ++D+Q++ L ++ P+E
Sbjct: 20 SHSAAAAKDAKPKKVAAVDSPSFVMNLFRGKAVTDQVFPYPLNMTDEQKETLGMVMSPLE 79
Query: 399 KFFQEVNDPAKNDENSXIEEGTVAGLWDLGAXGLQVPGELGGLGLSNTXYARLVEVVGAH 578
K EVND KNDE S I + +LG G+ VP EL G G +N+ AR+ E+VGA+
Sbjct: 80 KMLVEVNDVVKNDETSDIPRAVLDQFAELGTFGVLVPPELEGSGFNNSQMARVAEIVGAY 139
Query: 579 XLGVGITLXAHQSIGFKGILLXGNPQQKE 665
LG G+ + AHQSIG+KGILL G QK+
Sbjct: 140 DLGFGVVMGAHQSIGYKGILLEGTDAQKQ 168
>U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical
protein E04F6.5a protein.
Length = 613
Score = 129 bits (311), Expect = 2e-30
Identities = 65/149 (43%), Positives = 93/149 (62%), Gaps = 1/149 (0%)
Frame = +3
Query: 222 SGARSAASEAQARN-GPRQSASFTLNLXRGRFEPTQVFPFPEPLSDDQRQMLQELVPPVE 398
S + +AA +A+ + S SF +NL RG+ QVFP+P ++D+Q++ L ++ P+E
Sbjct: 20 SHSAAAAKDAKPKKVAAVDSPSFVMNLFRGKAVTDQVFPYPLNMTDEQKETLGMVMSPLE 79
Query: 399 KFFQEVNDPAKNDENSXIEEGTVAGLWDLGAXGLQVPGELGGLGLSNTXYARLVEVVGAH 578
K EVND KNDE S I + +LG G+ VP EL G G +N+ AR+ E+VGA+
Sbjct: 80 KMLVEVNDVVKNDETSDIPRAVLDQFAELGTFGVLVPPELEGSGFNNSQMARVAEIVGAY 139
Query: 579 XLGVGITLXAHQSIGFKGILLXGNPQQKE 665
LG G+ + AHQSIG+KGILL G QK+
Sbjct: 140 DLGFGVVMGAHQSIGYKGILLEGTDAQKQ 168
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +3
Query: 348 LSDDQRQMLQELVPPVEKFFQEVNDP--AKNDENSXIEEGTVAGLWDLGAXGLQVPGELG 521
+S D + +E+ KF ++V P AK DE+ V LG Q+P + G
Sbjct: 27 ISFDLSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYG 86
Query: 522 GLGLSNTXYARLVEVVGAHXLGVGITLXAHQSIGFKGILLXGNPQQKE 665
G G++ A +VE + G+ + + S+ + + GN +QK+
Sbjct: 87 GPGMTTLETALIVEALSYGCTGIQLGIMG-PSLAIAPVYISGNEEQKK 133
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 34.3 bits (75), Expect = 0.079
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +3
Query: 474 LWDLGAXGLQVPGELGGLGLSNTXYARLVEVVGAHXLGVGITLXAHQSIGFKGILLXGNP 653
L D G G+ P E GG G++ + +E + G+ ++ AH ++ I+ G+
Sbjct: 81 LGDQGLLGITAPAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSE 140
Query: 654 QQKE 665
+Q++
Sbjct: 141 EQRK 144
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 34.3 bits (75), Expect = 0.079
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +3
Query: 474 LWDLGAXGLQVPGELGGLGLSNTXYARLVEVVGAHXLGVGITLXAHQSIGFKGILLXGNP 653
L D G G+ P E GG G++ + +E + G+ ++ AH ++ I+ G+
Sbjct: 81 LGDQGLLGITAPAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSE 140
Query: 654 QQKE 665
+Q++
Sbjct: 141 EQRK 144
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 174 GGRCLVPKTTAVVPXCSGARSAASEAQARNGPR 272
GG C P A C GA +AA A A PR
Sbjct: 25 GGGCCQPSQPACANPCGGASAAAYAAPAAGYPR 57
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 174 GGRCLVPKTTAVVPXCSGARSAASEAQARNGPR 272
GG C P A C GA +AA A A PR
Sbjct: 25 GGGCCQPSQPACANPCGGASAAAYAAPAAGYPR 57
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 174 GGRCLVPKTTAVVPXCSGARSAASEAQARNGPR 272
GG C P A C GA +AA A A PR
Sbjct: 25 GGGCCQPSQPACANPCGGASAAAYAAPAAGYPR 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,357,418
Number of Sequences: 27780
Number of extensions: 265906
Number of successful extensions: 914
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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