Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P30_F_A04
(578 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VE04 Cluster: 39S ribosomal protein L55, mitochondria... 48 2e-04
UniRef50_Q4PLY9 Cluster: Possible mitochondrial ribosomal protei... 41 0.024
UniRef50_UPI0000F1E90B Cluster: PREDICTED: hypothetical protein;... 40 0.042
UniRef50_UPI0000E495B7 Cluster: PREDICTED: similar to ENSANGP000... 37 0.39
UniRef50_UPI000065E3FA Cluster: 39S ribosomal protein L55, mitoc... 36 0.69
UniRef50_UPI0001555475 Cluster: PREDICTED: similar to mitochondr... 35 1.2
UniRef50_Q2SR38 Cluster: Metallo-beta-lactamase superfamily prot... 35 1.2
UniRef50_A7RNQ0 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.6
UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondria... 34 2.8
UniRef50_UPI0000F2DD64 Cluster: PREDICTED: hypothetical protein;... 33 3.7
UniRef50_UPI0000DB793A Cluster: PREDICTED: similar to mitochondr... 33 3.7
UniRef50_Q7T9S5 Cluster: ORF_90; n=1; Adoxophyes orana granulovi... 33 4.9
UniRef50_Q24HK4 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_Q2KHY3 Cluster: Mitochondrial ribosomal protein L55; n=... 33 6.4
UniRef50_Q2G0L6 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
>UniRef50_Q9VE04 Cluster: 39S ribosomal protein L55, mitochondrial
precursor; n=4; Endopterygota|Rep: 39S ribosomal protein
L55, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 107
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 31/69 (44%)
Frame = +2
Query: 233 VYSRMYYPTTIALPDGSTINVRYHEPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIT 412
VY R+Y PT + PDGSTIN+RYHEPR I
Sbjct: 30 VYCRLY-PTVVVQPDGSTINIRYHEPRKIIKLPLDLSTLTDAERRARLEARKPRKKVKIM 88
Query: 413 EDLGDSFNA 439
E++ D+FNA
Sbjct: 89 EEVEDNFNA 97
>UniRef50_Q4PLY9 Cluster: Possible mitochondrial ribosomal protein
L55; n=1; Ixodes scapularis|Rep: Possible mitochondrial
ribosomal protein L55 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 119
Score = 40.7 bits (91), Expect = 0.024
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2
Query: 236 YSRMYYPTTIALPDGSTINVRYHEPR 313
Y R+Y PT + PDGSTINVRYHE R
Sbjct: 42 YVRLY-PTALVQPDGSTINVRYHESR 66
>UniRef50_UPI0000F1E90B Cluster: PREDICTED: hypothetical protein;
n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 131
Score = 39.9 bits (89), Expect = 0.042
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +2
Query: 236 YSRMYYPTTIALPDGSTINVRYHEPR 313
Y RMY P + PDGSTIN+RY EPR
Sbjct: 54 YERMY-PVLLVRPDGSTINIRYQEPR 78
>UniRef50_UPI0000E495B7 Cluster: PREDICTED: similar to
ENSANGP00000013649; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000013649
- Strongylocentrotus purpuratus
Length = 123
Score = 36.7 bits (81), Expect = 0.39
Identities = 22/69 (31%), Positives = 28/69 (40%)
Frame = +2
Query: 233 VYSRMYYPTTIALPDGSTINVRYHEPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIT 412
VYSRMY PT + DGST ++Y EPR I
Sbjct: 45 VYSRMY-PTLVVNTDGSTFRIKYGEPRKILKLPVDVNMLAADEKKIRLARYQPKKKVKIE 103
Query: 413 EDLGDSFNA 439
+DL D+F+A
Sbjct: 104 DDLDDNFDA 112
>UniRef50_UPI000065E3FA Cluster: 39S ribosomal protein L55,
mitochondrial precursor (L55mt) (MRP-L55).; n=1;
Takifugu rubripes|Rep: 39S ribosomal protein L55,
mitochondrial precursor (L55mt) (MRP-L55). - Takifugu
rubripes
Length = 122
Score = 35.9 bits (79), Expect = 0.69
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 251 YPTTIALPDGSTINVRYHEPR 313
YP + PDGSTIN++Y EPR
Sbjct: 50 YPVMLVQPDGSTINIQYREPR 70
>UniRef50_UPI0001555475 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L55; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L55 - Ornithorhynchus anatinus
Length = 541
Score = 35.1 bits (77), Expect = 1.2
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 233 VYSRMYYPTTIALPDGSTINVRYHEPR 313
VY+R+Y P + DGST+++RY EPR
Sbjct: 229 VYARLY-PVLLVREDGSTVHIRYREPR 254
>UniRef50_Q2SR38 Cluster: Metallo-beta-lactamase superfamily
protein, putative; n=4; Mycoplasma|Rep:
Metallo-beta-lactamase superfamily protein, putative -
Mycoplasma capricolum subsp. capricolum (strain
California kid / ATCC27343 / NCTC 10154)
Length = 688
Score = 35.1 bits (77), Expect = 1.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 42 ANFIFYNNITFMITVFYLKKLTLFVNYKNDLQIIV 146
ANFI N ++I + LT+ +NYKN L+I++
Sbjct: 33 ANFILNFNFNYLILAIFFLSLTIILNYKNTLKILL 67
>UniRef50_A7RNQ0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 144
Score = 34.7 bits (76), Expect = 1.6
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 236 YSRMYYPTTIALPDGSTINVRYHEPR 313
Y RMY + PDGST +RYHEPR
Sbjct: 66 YPRMY-KVLVVQPDGSTYTMRYHEPR 90
>UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondrial
precursor; n=17; Eutheria|Rep: 39S ribosomal protein
L55, mitochondrial precursor - Homo sapiens (Human)
Length = 128
Score = 33.9 bits (74), Expect = 2.8
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 236 YSRMYYPTTIALPDGSTINVRYHEPR 313
Y+R+Y P + DGSTI++RY EPR
Sbjct: 48 YARLY-PVLLVKQDGSTIHIRYREPR 72
>UniRef50_UPI0000F2DD64 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 306
Score = 33.5 bits (73), Expect = 3.7
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 236 YSRMYYPTTIALPDGSTINVRYHEPR 313
Y+R+Y P + DGSTI++RY EPR
Sbjct: 228 YARLY-PVMLVKQDGSTIHIRYKEPR 252
>UniRef50_UPI0000DB793A Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L55 CG14283-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L55 CG14283-PA - Apis mellifera
Length = 122
Score = 33.5 bits (73), Expect = 3.7
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 251 YPTTIALPDGSTINVRYHEPR 313
+P + LPDGS+IN+ Y EPR
Sbjct: 55 FPVYLVLPDGSSINIDYEEPR 75
>UniRef50_Q7T9S5 Cluster: ORF_90; n=1; Adoxophyes orana
granulovirus|Rep: ORF_90 - Adoxophyes orana granulovirus
(AoGV)
Length = 90
Score = 33.1 bits (72), Expect = 4.9
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 224 WIFVIQAMLLLRYLFVKEFINAPL*FDN 141
W+F+I + L+ YL VK F N+ + +DN
Sbjct: 55 WLFIIVLLFLISYLIVKSFRNSKILYDN 82
>UniRef50_Q24HK4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 897
Score = 33.1 bits (72), Expect = 4.9
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Frame = +1
Query: 121 IKMICKLLSNY----KGALINSLTKRYLNNNIACITKIHRXSLLSNVLPYN-NCFAGWIN 285
IK CKL N K +SL R LN ++ CI I S ++ +LP++ + F I+
Sbjct: 281 IKFFCKLNENQLEQTKIPSFSSLNNRLLNQDLDCIQSIEIPSYVNQILPHSASQFTPLIS 340
Query: 286 NKRSVS*T*ENYXXXXXXXXXXXXXKKSTAGETKAQE 396
N +++ + +S TK QE
Sbjct: 341 NLQNIIKKQNDLPFDENFSSSISKSTRSNHSRTKEQE 377
>UniRef50_Q2KHY3 Cluster: Mitochondrial ribosomal protein L55; n=1;
Bos taurus|Rep: Mitochondrial ribosomal protein L55 -
Bos taurus (Bovine)
Length = 95
Score = 32.7 bits (71), Expect = 6.4
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 236 YSRMYYPTTIALPDGSTINVRYHEPR 313
Y+R+Y P + DGSTI++RY EPR
Sbjct: 49 YARLY-PILLVKQDGSTIHIRYPEPR 73
>UniRef50_Q2G0L6 Cluster: Putative uncharacterized protein; n=1;
Staphylococcus aureus subsp. aureus NCTC 8325|Rep:
Putative uncharacterized protein - Staphylococcus aureus
(strain NCTC 8325)
Length = 85
Score = 32.3 bits (70), Expect = 8.5
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = -1
Query: 290 LLLIHPAKQLL*GSTFESKLXLWIFVIQAMLLLRYLFVKEFINAPL*FDNNLQIIFIIYE 111
+L + KQ L +TF SK+ L I ++ + L F F N PL + N + IIF IY+
Sbjct: 1 MLSLLKLKQYL-QNTFLSKICL-IDLVSCLFYLLLSFYYSFNNTPLKYQNLINIIFCIYK 58
Query: 110 *CKFFQ 93
+++
Sbjct: 59 FLHYYR 64
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,194,962
Number of Sequences: 1657284
Number of extensions: 6575589
Number of successful extensions: 14294
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 13871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14292
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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