Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_P21
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   3.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.4  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 188 APPPPLQIEATP 223
           +PPPP QI A P
Sbjct: 329 SPPPPYQISAQP 340


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +2

Query: 392  SHNATSSFLTPVFSNNLGMATAGAIGKSMGSHSPSA 499
            S  A SS    +  NN G A A + GK   SH  +A
Sbjct: 958  SLGALSSMFDSLSGNNTGDALAPSGGKKGSSHPLAA 993


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 176 ITDDAPPPPLQIEATPFS 229
           I +++PPP  Q  ATP S
Sbjct: 6   IYEESPPPAPQSAATPIS 23


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 28  IFNFNLLTIYKNFFYLIPTLTKKYLK 105
           + N+N+  I +NF+YL P ++   LK
Sbjct: 53  LVNYNVSEISENFYYL-PAMSTGPLK 77


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 134 YTLHFMLSTYIF 169
           +T+HF+L TY F
Sbjct: 92  FTVHFLLCTYYF 103


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 43  LLTIYKNFFYLIPTLTKKYLKQCTKKAQ 126
           L+ + KN F  +     K  K C  KAQ
Sbjct: 544 LVLMLKNRFVTLNVQLTKLTKNCATKAQ 571


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,434
Number of Sequences: 336
Number of extensions: 3344
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)