Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_P18
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   5.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.5  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.3  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.3  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 644 GVMCQILTQSCQPHYC 597
           G +C I T  C P+ C
Sbjct: 100 GALCNINTDDCSPNPC 115


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 600 IMGLA*LGENLTHDTQSLCPSSWMV 674
           + G   +  NLT  T SLC  SW V
Sbjct: 164 VTGTPIIFHNLTLITYSLCVISWAV 188


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 600 IMGLA*LGENLTHDTQSLCPSSWMV 674
           + G   +  NLT  T SLC  SW V
Sbjct: 164 VTGTPIIFHNLTLITYSLCVISWAV 188


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 496 VSPDGSLCASGGKDMK 449
           VSP+GSL  S  ++M+
Sbjct: 18  VSPEGSLLPSNSREMR 33


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 647 LGVMCQILTQSCQPHYC 597
           LG +C+I    C+P  C
Sbjct: 253 LGYICEINVDDCRPGAC 269


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 297 WLKSSGLKSLTKRKLPRQT 241
           W+K+ G  S T  K  RQT
Sbjct: 171 WMKAHGDSSATGNKRTRQT 189


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 297 WLKSSGLKSLTKRKLPRQT 241
           W+K+ G  S T  K  RQT
Sbjct: 171 WMKAHGDSSATGNKRTRQT 189


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 297 WLKSSGLKSLTKRKLPRQT 241
           W+K+ G  S T  K  RQT
Sbjct: 171 WMKAHGDSSATGNKRTRQT 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,155
Number of Sequences: 336
Number of extensions: 4130
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)