Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_P16
         (621 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5KFS2 Cluster: Expressed protein; n=2; Filobasidiella ...    34   2.4  
UniRef50_UPI0000DB76D0 Cluster: PREDICTED: similar to CG1632-PA;...    33   4.2  
UniRef50_A7SI12 Cluster: Predicted protein; n=1; Nematostella ve...    33   7.3  
UniRef50_UPI0000EB0C63 Cluster: UPI0000EB0C63 related cluster; n...    32   9.6  
UniRef50_A0KKV3 Cluster: Integral membrane protein; n=2; Aeromon...    32   9.6  

>UniRef50_Q5KFS2 Cluster: Expressed protein; n=2; Filobasidiella
           neoformans|Rep: Expressed protein - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 229

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 281 HLPVPVDIQPSIAGHVSITTLSPSA 207
           HLP+P+   P +  H+SIT L+PSA
Sbjct: 148 HLPIPIPTSPPLTLHLSITRLTPSA 172


>UniRef50_UPI0000DB76D0 Cluster: PREDICTED: similar to CG1632-PA;
           n=2; Endopterygota|Rep: PREDICTED: similar to CG1632-PA
           - Apis mellifera
          Length = 777

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = -2

Query: 317 RRQTSLDLPDVKHLPVPVDIQPSIAGHVSITTLSPSAKVHRHL 189
           RR TSL+L   KHLP  V   P+I GH S+  +       R L
Sbjct: 233 RRCTSLNLSYCKHLPYNVTSYPNILGHRSLADVQEDVIAFREL 275


>UniRef50_A7SI12 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 340

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
 Frame = -2

Query: 446 RH*TDSGAAVTVSRRTAIQASVPLARLNPVYW--RLETYAYVWYLRRQTSLDLPDVKHLP 273
           +H   + A ++++ R    + +P+++   VYW  RL+TY+  W   R+    +P  +H  
Sbjct: 221 KHILKNKAQISIAWRKPENSDLPVSKYR-VYWSKRLDTYSTDWQHLREHRGRVPATRHKA 279

Query: 272 VPVDIQPSIAGHVSITTLS 216
           +   ++ +   H++I  +S
Sbjct: 280 IIHGLELNTTYHIAIQAIS 298


>UniRef50_UPI0000EB0C63 Cluster: UPI0000EB0C63 related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB0C63 UniRef100
           entry - Canis familiaris
          Length = 427

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -1

Query: 258 PAIDSRTRQHNNPLAQRKGPPPPLEARPVVCK*PLSGRARP 136
           P  +S  R H +P +  +GPPPP E+RP   + P S  A P
Sbjct: 147 PKAESCLRTHRSP-SGLQGPPPPAESRPHAGQAPPSESAPP 186


>UniRef50_A0KKV3 Cluster: Integral membrane protein; n=2;
           Aeromonas|Rep: Integral membrane protein - Aeromonas
           hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
           9240)
          Length = 259

 Score = 32.3 bits (70), Expect = 9.6
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +3

Query: 84  HAQHALLVXQRHGLSXXPVSPSH*VVTCRQQAVLREVAVDLCAGREGCYADVSGYRWLDV 263
           H   A+ + Q  GL+  P   ++   T +Q  V + +   L  GR   Y++ + + W+ V
Sbjct: 192 HLPRAMALYQGQGLNAVPAPTNY---TAKQSQVAQPLYSYLPKGRYLMYSEAAIHEWIGV 248

Query: 264 YWYR 275
           +W R
Sbjct: 249 WWAR 252


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,142,204
Number of Sequences: 1657284
Number of extensions: 11615581
Number of successful extensions: 31814
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31782
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)