Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_P14
         (370 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   0.99 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   0.99 
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   3.0  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   5.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   5.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   5.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   5.3  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      20   7.0  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 0.99
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 345 IFYVTVHSCIVTCXLFILLH*VIFPYFDN 259
           IF+ +      T  LFI+   VI PYF N
Sbjct: 163 IFFASYQYGTKTYSLFIVFMTVILPYFIN 191


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 0.99
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 345 IFYVTVHSCIVTCXLFILLH*VIFPYFDN 259
           IF+ +      T  LFI+   VI PYF N
Sbjct: 163 IFFASYQYGTKTYSLFIVFMTVILPYFIN 191


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 139 HLHHQRLLYPNFPREILRTR 198
           H  HQ ++Y N PR+  R R
Sbjct: 44  HPIHQTVIYHNNPRDPNRAR 63


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = -1

Query: 148 DEDVSVWEDNWEXDVIQDDFNQQLRQQLEKTEGSRNLNFSLSLI 17
           D DV ++  +   +  +  +NQ+  Q       + NL FS+  I
Sbjct: 92  DRDVDLFRGSSTPESPEHYYNQKTLQANNNDASNGNLKFSIDNI 135


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
 Frame = +1

Query: 124 LPKPIHLHHQRLLYP--NFPREILRTRHPLLANQ 219
           LP P H HHQ    P    P +I    +PL  NQ
Sbjct: 735 LPPPPHPHHQPPRNPVGTNPHDI---NNPLSVNQ 765


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
 Frame = +1

Query: 124 LPKPIHLHHQRLLYP--NFPREILRTRHPLLANQ 219
           LP P H HHQ    P    P +I    +PL  NQ
Sbjct: 627 LPPPPHPHHQPPRNPVGTNPHDI---NNPLSVNQ 657


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 149 ISVFCTPIFRGKFFELVILF*QTKVYFL 232
           IS+F      G F E V++F    V+F+
Sbjct: 122 ISIFVNLAILGVFGEFVLVFVPDYVFFV 149


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 115 PSCLPKPI 138
           P C+PKPI
Sbjct: 53  PGCVPKPI 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,824
Number of Sequences: 336
Number of extensions: 1237
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)