Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_P14
         (370 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1186 - 9440805-9440938,9442890-9442986                           47   5e-06
01_03_0048 + 11953517-11953681,11954603-11954669,11954894-11955024     46   1e-05
03_01_0184 - 1479520-1479649,1479889-1479938,1480519-1480683,148...    27   3.5  
03_01_0251 - 1956985-1957058,1957238-1957361,1957646-1957744,195...    27   4.6  
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230           27   4.6  
01_06_0986 - 33602714-33602741,33603037-33603146,33603401-336036...    27   4.6  
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171...    26   8.1  
07_03_1325 + 25830838-25831440                                         26   8.1  

>01_01_1186 - 9440805-9440938,9442890-9442986
          Length = 76

 Score = 46.8 bits (106), Expect = 5e-06
 Identities = 16/39 (41%), Positives = 27/39 (69%)
 Frame = -1

Query: 175 ENWGTEDADDEDVSVWEDNWEXDVIQDDFNQQLRQQLEK 59
           + W  ++  DE +  WED+W+ D + DDF+ QLR++LE+
Sbjct: 32  QEWDDKEDGDEAIQQWEDDWDDDDVNDDFSLQLRKELEE 70


>01_03_0048 + 11953517-11953681,11954603-11954669,11954894-11955024
          Length = 120

 Score = 45.6 bits (103), Expect = 1e-05
 Identities = 16/39 (41%), Positives = 27/39 (69%)
 Frame = -1

Query: 178 AENWGTEDADDEDVSVWEDNWEXDVIQDDFNQQLRQQLE 62
           ++ W  ++  +E V  WED+W+ D + DDF+ QLR++LE
Sbjct: 76  SDEWDDKEEGNEAVQQWEDDWDDDDVNDDFSLQLRKELE 114


>03_01_0184 -
           1479520-1479649,1479889-1479938,1480519-1480683,
           1481287-1481339,1481805-1481934,1482189-1482266,
           1482583-1482642,1483428-1483480,1483574-1483895
          Length = 346

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 127 PKPIHLHHQRLLYPNFPREILRTRHPLLANQGLLSVXQPLYC 252
           P+ +H H +R   P   +    TR  LL  +G  S  +PLYC
Sbjct: 11  PRLLHRHRRREAKP---QRRSATRVSLLPRRGAASARRPLYC 49


>03_01_0251 -
           1956985-1957058,1957238-1957361,1957646-1957744,
           1957821-1957919,1958097-1958195,1958306-1958404,
           1958744-1958820,1959232-1959952
          Length = 463

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 124 LPKPIHLHHQRLLYPNFPREILRTRHPLLANQGL 225
           +P  + LHH  LL+P FP  + +T +PL A+  L
Sbjct: 1   MPPSLSLHHHLLLFP-FPSHV-QTLNPLSASPRL 32


>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
          Length = 171

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -1

Query: 178 AENWGTEDADDEDVSVWEDNWEXD 107
           AEN G +DA DED S  E N E +
Sbjct: 83  AENQGDDDAGDEDASEEEGNDEDE 106


>01_06_0986 -
           33602714-33602741,33603037-33603146,33603401-33603601,
           33604605-33604697,33604937-33605182,33606007-33606372,
           33606459-33606599,33607170-33607526
          Length = 513

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -1

Query: 166 GTEDADDEDVSV---WEDNWEXDVIQDDFNQQL 77
           G E+   ED+     WE+ W+ +V +DD N Q+
Sbjct: 283 GHENEQGEDIIAILPWEEWWDFEVKKDDSNPQI 315


>11_01_0219 -
           1710206-1710246,1710479-1710620,1710699-1710752,
           1710838-1710909,1711631-1711699,1711807-1711848,
           1711946-1712014,1712130-1712267,1712390-1712500,
           1712576-1712726,1713720-1713775,1714076-1714753
          Length = 540

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 175 ENWGTEDADDEDVSVWEDNWEXDVIQDDFNQQLRQQLEKTEGS 47
           ENW  ED+D ED    +++ E D    D  +    + E+ EG+
Sbjct: 199 ENWMEEDSDSEDEEYLDEDEEDDDEHLDL-EDFDDEEEEEEGA 240


>07_03_1325 + 25830838-25831440
          Length = 200

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = -1

Query: 160 EDADDEDVSVWEDNWEXDVIQD 95
           +DAD+ED+  W++++  ++ QD
Sbjct: 114 DDADEEDLKEWDEDFVDELDQD 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,104,364
Number of Sequences: 37544
Number of extensions: 117519
Number of successful extensions: 305
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)