Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_P14
         (370 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   0.90 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   6.4  
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       22   8.4  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       22   8.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   8.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   8.4  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = -1

Query: 139 VSVWEDNWEXDVIQDDFNQQLR 74
           +  W++ W+ D +Q D ++  R
Sbjct: 934 IDCWQEEWDADALQQDASRHTR 955


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 101 DDVXFPVVFPNRYIFIISVFCTPIFRGKFFELVILF*QTKVYF 229
           DD  + +V+PNR   ++      I R +F E V +     +Y+
Sbjct: 663 DDRMWKIVYPNRLESMLEYSDVQIDRTRFEEAVPVDLNPTIYY 705


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 228 FCXSAIILFIDYRNKEISLNVGE*IXCKSQYNYELSRKKCH 350
           F  S  I+FIDY  K  ++N    I    +   E++ K+ H
Sbjct: 77  FLDSQGIIFIDYIEKGKTINSEYYIKLLERLKDEIATKRPH 117


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 228 FCXSAIILFIDYRNKEISLNVGE*IXCKSQYNYELSRKKCH 350
           F  S  I+FIDY  K  ++N    I    +   E++ K+ H
Sbjct: 77  FLDSQGIIFIDYIEKGKTINSEYYIKLLERLKDEIATKRPH 117


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 237  SAIILFIDYRNKEISLNVGE 296
            SA+ LF   RNK  SL VGE
Sbjct: 1157 SAVQLFNFQRNKLTSLPVGE 1176


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 237  SAIILFIDYRNKEISLNVGE 296
            SA+ LF   RNK  SL VGE
Sbjct: 1158 SAVQLFNFQRNKLTSLPVGE 1177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 283,797
Number of Sequences: 2352
Number of extensions: 4748
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)