Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_P14
(370 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41515-1|AAA91179.1| 70|Homo sapiens DSS1 protein. 64 1e-10
CR456887-1|CAG33168.1| 70|Homo sapiens SHFM1 protein. 64 1e-10
BC032782-1|AAH32782.1| 70|Homo sapiens split hand/foot malform... 64 1e-10
AC073230-1|AAQ93368.1| 70|Homo sapiens unknown protein. 64 1e-10
BC053616-1|AAH53616.1| 1483|Homo sapiens PREX1 protein protein. 28 8.2
AL445192-1|CAI39886.1| 1659|Homo sapiens RP11-269H4.1 protein. 28 8.2
AL133342-1|CAI23274.1| 1659|Homo sapiens RP11-269H4.1 protein. 28 8.2
AL035106-1|CAI43186.1| 1659|Homo sapiens RP11-269H4.1 protein. 28 8.2
AJ320261-1|CAC86401.1| 1659|Homo sapiens P-Rex1 protein protein. 28 8.2
AB037836-1|BAA92653.2| 1621|Homo sapiens KIAA1415 protein protein. 28 8.2
>U41515-1|AAA91179.1| 70|Homo sapiens DSS1 protein.
Length = 70
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = -1
Query: 232 QKVDLGXXXXXXXXXXFPAENWGTEDADDEDVSVWEDNWEXDVIQDDFNQQLRQQLEK 59
Q VDLG FPAE+W D +DED VWEDNW+ D ++DDF+ QLR +LEK
Sbjct: 6 QPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62
>CR456887-1|CAG33168.1| 70|Homo sapiens SHFM1 protein.
Length = 70
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = -1
Query: 232 QKVDLGXXXXXXXXXXFPAENWGTEDADDEDVSVWEDNWEXDVIQDDFNQQLRQQLEK 59
Q VDLG FPAE+W D +DED VWEDNW+ D ++DDF+ QLR +LEK
Sbjct: 6 QPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62
>BC032782-1|AAH32782.1| 70|Homo sapiens split hand/foot
malformation (ectrodactyly) type 1 protein.
Length = 70
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = -1
Query: 232 QKVDLGXXXXXXXXXXFPAENWGTEDADDEDVSVWEDNWEXDVIQDDFNQQLRQQLEK 59
Q VDLG FPAE+W D +DED VWEDNW+ D ++DDF+ QLR +LEK
Sbjct: 6 QPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62
>AC073230-1|AAQ93368.1| 70|Homo sapiens unknown protein.
Length = 70
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = -1
Query: 232 QKVDLGXXXXXXXXXXFPAENWGTEDADDEDVSVWEDNWEXDVIQDDFNQQLRQQLEK 59
Q VDLG FPAE+W D +DED VWEDNW+ D ++DDF+ QLR +LEK
Sbjct: 6 QPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62
>BC053616-1|AAH53616.1| 1483|Homo sapiens PREX1 protein protein.
Length = 1483
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 322 LYCDLHXIYSPTLSDISLFR*SINSIMADXQKVD 221
LYC LH +Y+P + D + S++ + VD
Sbjct: 341 LYCRLHSLYTPVIKDRDYHLKTYKSVLPGSKLVD 374
>AL445192-1|CAI39886.1| 1659|Homo sapiens RP11-269H4.1 protein.
Length = 1659
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 322 LYCDLHXIYSPTLSDISLFR*SINSIMADXQKVD 221
LYC LH +Y+P + D + S++ + VD
Sbjct: 517 LYCRLHSLYTPVIKDRDYHLKTYKSVLPGSKLVD 550
>AL133342-1|CAI23274.1| 1659|Homo sapiens RP11-269H4.1 protein.
Length = 1659
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 322 LYCDLHXIYSPTLSDISLFR*SINSIMADXQKVD 221
LYC LH +Y+P + D + S++ + VD
Sbjct: 517 LYCRLHSLYTPVIKDRDYHLKTYKSVLPGSKLVD 550
>AL035106-1|CAI43186.1| 1659|Homo sapiens RP11-269H4.1 protein.
Length = 1659
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 322 LYCDLHXIYSPTLSDISLFR*SINSIMADXQKVD 221
LYC LH +Y+P + D + S++ + VD
Sbjct: 517 LYCRLHSLYTPVIKDRDYHLKTYKSVLPGSKLVD 550
>AJ320261-1|CAC86401.1| 1659|Homo sapiens P-Rex1 protein protein.
Length = 1659
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 322 LYCDLHXIYSPTLSDISLFR*SINSIMADXQKVD 221
LYC LH +Y+P + D + S++ + VD
Sbjct: 517 LYCRLHSLYTPVIKDRDYHLKTYKSVLPGSKLVD 550
>AB037836-1|BAA92653.2| 1621|Homo sapiens KIAA1415 protein protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 322 LYCDLHXIYSPTLSDISLFR*SINSIMADXQKVD 221
LYC LH +Y+P + D + S++ + VD
Sbjct: 479 LYCRLHSLYTPVIKDRDYHLKTYKSVLPGSKLVD 512
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,693,280
Number of Sequences: 237096
Number of extensions: 612633
Number of successful extensions: 1338
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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