Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_P14
(370 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006714-3|AAK29724.3| 82|Caenorhabditis elegans Hypothetical ... 47 4e-06
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical... 27 3.2
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 27 5.5
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 27 5.5
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 26 7.3
Z81135-3|CAB03456.1| 251|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical pr... 26 9.7
U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein signa... 26 9.7
AF025457-3|AAB70963.2| 248|Caenorhabditis elegans Hypothetical ... 26 9.7
>AC006714-3|AAK29724.3| 82|Caenorhabditis elegans Hypothetical
protein Y119D3B.15 protein.
Length = 82
Score = 47.2 bits (107), Expect = 4e-06
Identities = 15/43 (34%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = -1
Query: 181 PAENWGTE-DADDEDVSVWEDNWEXDVIQDDFNQQLRQQLEKT 56
P + W + +++DV+VWEDNW+ + + +F++QL+++L K+
Sbjct: 35 PVQEWAERAEGEEDDVNVWEDNWDDETHESEFSKQLKEELRKS 77
>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
protein Y47G6A.29 protein.
Length = 2460
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = -1
Query: 142 DVSVWEDNWEXDVIQDDFNQQLRQQLEKTEGSRNLNFSL 26
D VW + W ++++ DF+ R + K+ ++ FS+
Sbjct: 611 DTDVWFELWRTELVKMDFDHHYRPLIVKSNIPSDIPFSI 649
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 26.6 bits (56), Expect = 5.5
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -1
Query: 169 WGTEDADDEDVSVWEDNWEXDVIQDDFN 86
W T DD+D W D + + +DF+
Sbjct: 732 WSTLQRDDDDEEEWNDEEDLSDVGEDFD 759
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 181 PAENWGTEDADDEDVSVWEDNWEXDV-IQDDFNQQLRQQLEKTEGSRNL-NFSLSLIK 14
P+ + +ED D+ ++ +D W +V DDF QL ++ T+ + L + +L+K
Sbjct: 399 PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-GSIDNTQNQKELTTVTTALVK 455
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 181 PAENWGTEDADDEDVSVWEDNWEXDV-IQDDFNQQLRQQLEKTEGSRNL-NFSLSLIK 14
P+ + +ED D+ ++ +D W +V DDF QL ++ T+ + L + +L+K
Sbjct: 399 PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-GSIDNTQNQKELTTVTTALVK 455
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 181 PAENWGTEDADDEDVSVWEDNWEXDV-IQDDFNQQLRQQLEKTEGSRNL-NFSLSLIK 14
P+ + +ED D+ ++ +D W +V DDF QL ++ T+ + L + +L+K
Sbjct: 399 PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-GSIDNTQNQKELTTVTTALVK 455
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 26.6 bits (56), Expect = 5.5
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -1
Query: 169 WGTEDADDEDVSVWEDNWEXDVIQDDFN 86
W T DD+D W D + + +DF+
Sbjct: 732 WSTLQRDDDDEEEWNDEEDLSDVGEDFD 759
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 181 PAENWGTEDADDEDVSVWEDNWEXDV-IQDDFNQQLRQQLEKTEGSRNL-NFSLSLIK 14
P+ + +ED D+ ++ +D W +V DDF QL ++ T+ + L + +L+K
Sbjct: 399 PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-GSIDNTQNQKELTTVTTALVK 455
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 181 PAENWGTEDADDEDVSVWEDNWEXDV-IQDDFNQQLRQQLEKTEGSRNL-NFSLSLIK 14
P+ + +ED D+ ++ +D W +V DDF QL ++ T+ + L + +L+K
Sbjct: 399 PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-GSIDNTQNQKELTTVTTALVK 455
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 181 PAENWGTEDADDEDVSVWEDNWEXDV-IQDDFNQQLRQQLEKTEGSRNL-NFSLSLIK 14
P+ + +ED D+ ++ +D W +V DDF QL ++ T+ + L + +L+K
Sbjct: 399 PSNSTFSEDTSDDFRTLPKDTWLPEVDFNDDFEYQL-GSIDNTQNQKELTTVTTALVK 455
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 26.6 bits (56), Expect = 5.5
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -1
Query: 169 WGTEDADDEDVSVWEDNWEXDVIQDDFN 86
W T DD+D W D + + +DF+
Sbjct: 732 WSTLQRDDDDEEEWNDEEDLSDVGEDFD 759
>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
protein C38D9.3 protein.
Length = 1496
Score = 26.2 bits (55), Expect = 7.3
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 148 DEDVSVWEDNWEXDVIQDDFNQQLRQQLEKTEGSRNLNFSLSL 20
+EDV++ ED DV DDF + QL + S N F+ S+
Sbjct: 158 EEDVALTEDQTNVDVEDDDFEAK-NDQLSR--ASSNYQFTSSV 197
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 157 DADDEDVSVWEDNWEXDVIQDDFNQQL 77
D DED+ +EDNW +I + FN +L
Sbjct: 1079 DEIDEDIKQFEDNW---LIYEMFNNEL 1102
>Z81135-3|CAB03456.1| 251|Caenorhabditis elegans Hypothetical
protein W01G7.4 protein.
Length = 251
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 154 ADDEDVSVWEDNWEXD 107
ADDED S EDNW D
Sbjct: 171 ADDEDDSNDEDNWRND 186
>Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical
protein F25H5.5 protein.
Length = 725
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -1
Query: 175 ENWGTEDADDEDVSVWEDNWEXDVIQDDFNQQLRQQLEKT-EGSRNLNF 32
EN G ED+D+++ +D +++ D F + ++++ GS NF
Sbjct: 183 ENSGEEDSDEKNNGRADDEMSVNLLNDSFTYDVFNNVKRSGPGSTVSNF 231
>Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical
protein F28C1.2 protein.
Length = 555
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 163 TEDADDEDVSVWEDNWEXDVIQDDFNQQ-LRQQLEKTEGSRNLNF 32
T D + +WED++E +++ D ++ L++ L+K NL F
Sbjct: 407 TGDIQTRRLKLWEDSFE-ELLADSLGRETLQKFLDKEYSGENLRF 450
>U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein
signaling regulator protein.
Length = 555
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 163 TEDADDEDVSVWEDNWEXDVIQDDFNQQ-LRQQLEKTEGSRNLNF 32
T D + +WED++E +++ D ++ L++ L+K NL F
Sbjct: 407 TGDIQTRRLKLWEDSFE-ELLADSLGRETLQKFLDKEYSGENLRF 450
>AF025457-3|AAB70963.2| 248|Caenorhabditis elegans Hypothetical
protein C08E3.5 protein.
Length = 248
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 169 NFPREILRTRHPLLANQGLLSVXQPLYCLSIIEIRKYHLM*ENK 300
NF R ++R L+ N L+ + L+C+SI+ +YH+ E K
Sbjct: 41 NF-RSVVRNMKVLI-NWLTLNYSEKLHCVSIVYNMRYHIRYEQK 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,478,604
Number of Sequences: 27780
Number of extensions: 110498
Number of successful extensions: 360
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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