Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_P06
(803 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1458 + 37512954-37513112,37513217-37513324,37513357-375134... 193 1e-49
05_04_0448 - 21349877-21349990,21350263-21350338,21350418-213505... 191 5e-49
03_02_0486 - 8811539-8811610,8811725-8812231,8812327-8812551,881... 146 2e-35
06_03_1034 - 27044892-27044983,27045189-27045216,27045514-270459... 113 2e-25
04_02_0036 - 9033411-9033746,9033961-9034032,9034122-9034222,903... 51 9e-07
07_03_1690 - 28716998-28717091,28717203-28717897,28718264-287184... 31 0.81
05_07_0076 - 27520152-27520379,27520785-27521096,27521194-275213... 29 4.3
07_01_0511 + 3806475-3806876,3807914-3808039,3808120-3808193,380... 28 7.6
02_02_0173 - 7433744-7433775,7434002-7434241,7434548-7437410 28 10.0
>01_06_1458 +
37512954-37513112,37513217-37513324,37513357-37513431,
37513520-37513581,37513690-37513756,37514161-37514274,
37514357-37514443,37514571-37514641,37514718-37514783,
37514941-37515027,37515127-37515202,37515321-37515424,
37515550-37515583
Length = 369
Score = 193 bits (471), Expect = 1e-49
Identities = 97/178 (54%), Positives = 124/178 (69%), Gaps = 1/178 (0%)
Frame = -1
Query: 803 INRLKSSFTTCLLVSEENQTVFTGRNRXGEAKYVVCFDPLDGSSNIECLVSVGSIFAIYK 624
+ L SS TC+LVSEE++ T + KY VCFDPLDGSSNI+C VS+G+IF IY
Sbjct: 105 VKALVSSGRTCVLVSEEDEEA-TFVDPALRGKYCVCFDPLDGSSNIDCGVSIGTIFGIYM 163
Query: 623 KKSEGDPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDP 444
K + + D L+PG+ +VAAGY +YGS+ +VLS G GVNGF DPS+GEFILT P
Sbjct: 164 IKDKENVTLEDVLQPGKNMVAAGYCMYGSSCTLVLS--TGNGVNGFTLDPSLGEFILTHP 221
Query: 443 NMKIPEKGKIYSINEGYAAEWDKGLQDYIEDKKRPKTGKA-YGARYVGSMVADVHRTI 273
++KIP+KGKIYS+NEG A WD+ ++E K PK G + RY+GSMVADVHRT+
Sbjct: 222 DIKIPKKGKIYSVNEGNAKNWDEPTAKFVEKCKFPKDGSSPKSLRYIGSMVADVHRTL 279
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/69 (57%), Positives = 54/69 (78%)
Frame = -2
Query: 265 GGIFMYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVPCYL 86
GG+F+YPA K +PNGKLR+LYE PMSF++ +AGG + GK LD+VP+ IH+R P +L
Sbjct: 282 GGVFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQSFTGKERALDLVPTKIHERSPIFL 341
Query: 85 GSKKDVEEL 59
GS +DVEE+
Sbjct: 342 GSFEDVEEI 350
>05_04_0448 -
21349877-21349990,21350263-21350338,21350418-21350504,
21350706-21350771,21350855-21350925,21351030-21351116,
21351201-21351314,21351612-21351678,21351807-21351868,
21351960-21352085,21352091-21352381
Length = 386
Score = 191 bits (466), Expect = 5e-49
Identities = 95/178 (53%), Positives = 121/178 (67%), Gaps = 1/178 (0%)
Frame = -1
Query: 803 INRLKSSFTTCLLVSEENQTVFTGRNRXGEAKYVVCFDPLDGSSNIECLVSVGSIFAIYK 624
+ L SS TC+LVSEEN+ + KY VCFDPLDGSSNI+C VS+G+IF IY
Sbjct: 130 VKALVSSGRTCVLVSEENEEAIIV-DAPLRGKYCVCFDPLDGSSNIDCGVSIGTIFGIYM 188
Query: 623 KKSEGDPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDP 444
K + + D L+PG +++AAGY +YGS+ +VLS G GVNGF DPS+GEFILT P
Sbjct: 189 IKDKDNVTLDDVLQPGTDMLAAGYCMYGSSCTLVLS--TGNGVNGFTLDPSLGEFILTHP 246
Query: 443 NMKIPEKGKIYSINEGYAAEWDKGLQDYIEDKKRPKTGK-AYGARYVGSMVADVHRTI 273
N+KIP +GKIYS+NEG A WD ++E K P+ G + RY+GSMVADVHRT+
Sbjct: 247 NIKIPNRGKIYSVNEGNAKNWDAPTAKFVEKCKFPQDGSPSKSLRYIGSMVADVHRTL 304
Score = 88.2 bits (209), Expect = 7e-18
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = -2
Query: 265 GGIFMYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVPCYL 86
GGIF+YPA + +PNGKLR+LYE PMSF++ +AGG A GK L++VP IH R P +L
Sbjct: 307 GGIFLYPADQKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKQRALELVPRKIHDRSPIFL 366
Query: 85 GSKKDVEEL 59
GS DVE++
Sbjct: 367 GSYDDVEDI 375
>03_02_0486 -
8811539-8811610,8811725-8812231,8812327-8812551,
8812648-8813064
Length = 406
Score = 146 bits (353), Expect = 2e-35
Identities = 85/191 (44%), Positives = 110/191 (57%), Gaps = 15/191 (7%)
Frame = -1
Query: 800 NRLKSSFTTCLLVSEENQTVFTGRNRXGEAKYVVCFDPLDGSSNIECLVSVGSIFAIYKK 621
N LKSS T ++ SEE + V Y+V FDPLDGSSNI+ VS GSIF IY
Sbjct: 143 NCLKSSGRTGVIASEE-EDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGIYSP 201
Query: 620 KSEG----------DPVESDAL----KPGRELVAAGYALYGSATMMVLSLGKGKGVNGFM 483
E D VE + +PG L+AAGY +Y S+ + VL++G G V F
Sbjct: 202 NDECLADIADDQNLDQVEQRCIVSVCQPGSNLLAAGYCMYSSSVIFVLTIGTGVYV--FT 259
Query: 482 YDPSIGEFILTDPNMKIPEKGKIYSINEGYAAEWDKGLQDYIEDKKRP-KTGKAYGARYV 306
DP GEF+LT ++IP+ GKIY+ NEG A WD L+ Y++ K P +GK Y ARY+
Sbjct: 260 LDPMYGEFVLTQEKVQIPKAGKIYAFNEGNYALWDDKLKSYMDSLKEPGPSGKPYSARYI 319
Query: 305 GSMVADVHRTI 273
GS+V D HRT+
Sbjct: 320 GSLVGDFHRTL 330
Score = 94.3 bits (224), Expect = 1e-19
Identities = 42/73 (57%), Positives = 56/73 (76%)
Frame = -2
Query: 265 GGIFMYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVPCYL 86
GGI+ YP + + NGKLRLLYEC PMSFIV +AGG ++G ILDI+P+ IHQRVP Y+
Sbjct: 333 GGIYGYPRDQKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRILDIMPTEIHQRVPLYI 392
Query: 85 GSKKDVEELLNYL 47
GS ++VE++ +L
Sbjct: 393 GSVEEVEKVEKFL 405
>06_03_1034 -
27044892-27044983,27045189-27045216,27045514-27045908,
27046224-27046312,27046352-27046620,27047037-27047270
Length = 368
Score = 113 bits (272), Expect = 2e-25
Identities = 69/179 (38%), Positives = 100/179 (55%), Gaps = 2/179 (1%)
Frame = -1
Query: 803 INRLKSSFTTCLLVSEENQTVFTGRNRXGEAKYVVCFDPLDGSSNIECLVSVGSIFAIYK 624
++ L+ S ++ SEEN N ++ YVV DPLDGS NIE + G+IF IY
Sbjct: 83 LSSLRRSGKVAVMASEENHLPIWVSN---DSPYVVVTDPLDGSRNIEVSIPTGTIFGIYN 139
Query: 623 KKSEGDPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDP 444
+ +E D + + L S T +V S G G G +GF D GEF+LT P
Sbjct: 140 RLAELDHLPEEERAQLNSLQ--------SGTHLVAS-GFGAGTHGFTLDHLTGEFVLTHP 190
Query: 443 NMKIPEKGKIYSINEGYAAEWDKGLQDYIEDKKRPK--TGKAYGARYVGSMVADVHRTI 273
+++IP +G+IYS+N+ +W +GL+ YI+ ++ K K Y ARYV S+VAD HRT+
Sbjct: 191 SIQIPPRGQIYSVNDARYFDWPEGLRKYIDTIRQGKGQHPKKYSARYVCSLVADFHRTL 249
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = -2
Query: 253 MYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVPCYLGSKK 74
+Y P LRL+YE NP+SF+ +AGG ++GK IL I P +HQR+P +LG +
Sbjct: 250 IYGGVAMNPRDHLRLVYEANPLSFLAEQAGGRGSDGKSRILSIQPVKLHQRLPLFLGGME 309
Query: 73 DVEELLNY 50
D+ EL +Y
Sbjct: 310 DMLELESY 317
>04_02_0036 -
9033411-9033746,9033961-9034032,9034122-9034222,
9034309-9034530,9034832-9034913,9035029-9035214,
9035311-9035445,9035543-9035641
Length = 410
Score = 51.2 bits (117), Expect = 9e-07
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Frame = -1
Query: 707 YVVCFDPLDGSSNIECLVSVGSIFAIYKKKSEGDPVESDALKPGRELVAAGYALYGSATM 528
+ V FDPLDGSS ++ +VG+IF ++ GD + G + VAA +YG T
Sbjct: 170 FSVAFDPLDGSSIVDTNFTVGTIFGVW----PGDKLTG---VTGGDQVAAAMGIYGPRTT 222
Query: 527 MVLSLGKGKGVNGFMYDPSIGEFILTDPNMKIPEKGKIYSINEGYAA----EWDKGLQDY 360
+++L G + F+ G++ I E GK++S A E+DK + Y
Sbjct: 223 YIIALKDCPGTHEFLLLDE-GKWQHVQDTTTIGE-GKMFSPGNLRATFDNPEYDKLINYY 280
Query: 359 IEDKKRPKTGKAYGARYVGSMVADVHR 279
+++K Y RY G MV DV++
Sbjct: 281 VKEK--------YTLRYTGGMVPDVNQ 299
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/65 (36%), Positives = 41/65 (63%)
Frame = -2
Query: 262 GIFMYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVPCYLG 83
GIF + +A KLRLL+E P+ F++ +AGG +++GK +LD V +++ +R G
Sbjct: 324 GIFTNVTSPTA-KAKLRLLFEVAPLGFLIEKAGGYSSDGKQSVLDKVINNLDERTQVAYG 382
Query: 82 SKKDV 68
SK ++
Sbjct: 383 SKNEI 387
>07_03_1690 -
28716998-28717091,28717203-28717897,28718264-28718446,
28718552-28719585,28719805-28719978,28720051-28720168,
28720339-28720521,28720647-28720739,28720981-28721166,
28722247-28722507
Length = 1006
Score = 31.5 bits (68), Expect = 0.81
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Frame = -1
Query: 734 GRNRXGEAKYVVCFDPLDGSSNIECLVSVGSIFAIYKKKSEGDPVESDALKPGRELVAAG 555
G N KY+ DP+ S+N+ VS GS + I S G S L +L+
Sbjct: 310 GSNMNFRPKYLNIIDPIKSSNNLGRSVSKGSFYRIRGAFSFGAQNLSQILMLPTDLIPT- 368
Query: 554 YALYGSATMMVLSLGKGK----GVNGFMYDPSI---GEFILTDPNMKIPE 426
++G + S G+GK G NG ++PS+ E+ L + + + E
Sbjct: 369 -EIFGFFVNTLKSHGRGKRSDVGNNG-SFEPSLDPESEYALWEDSSDVKE 416
>05_07_0076 -
27520152-27520379,27520785-27521096,27521194-27521333,
27521893-27521956,27522071-27522277,27522350-27522493,
27522578-27522709,27522880-27524294,27524647-27524920,
27526096-27526129,27527028-27527059
Length = 993
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 450 GKNELSYRRVVHEAVHALALSQRQDHHGSRTIQGIARSD 566
G + L+ H H + LS+R + SRTIQG+ + D
Sbjct: 81 GNSPLALALYTHWFYHNIDLSERLNTRKSRTIQGLGKMD 119
>07_01_0511 +
3806475-3806876,3807914-3808039,3808120-3808193,
3808278-3808347,3808431-3808486,3808578-3808649,
3808678-3808811,3808967-3809030,3809111-3809240,
3809326-3809541,3809629-3809750,3810527-3810701,
3810788-3810878,3811040-3811197,3811330-3811518,
3813257-3813340,3813362-3813536,3815300-3815955,
3816226-3816648,3816752-3816790
Length = 1151
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = -1
Query: 461 FILTDPNMKIPEKGKIYSINEGYAAEWDKGLQDYIEDKKRPKTGKAYGARYVGSMVADVH 282
F+L P P++ K+Y I+ G A++W + +++ +RP + G S+ A +
Sbjct: 291 FLLGQPGS--PDEKKLYLIDLGLASKWRESSGQHVDYDQRPDIFR--GTIRYASVHAHLG 346
Query: 281 RTIKXRRNIHVSGY 240
RT R ++ Y
Sbjct: 347 RTGSRRDDLESLAY 360
>02_02_0173 - 7433744-7433775,7434002-7434241,7434548-7437410
Length = 1044
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 163 GLATNGKVPILDIVPSSIHQRVPCYLGSKKDVEEL 59
GL T + LD+ +++H R+P LGS +E +
Sbjct: 137 GLGTLPNLSSLDLTSNNLHGRIPPLLGSSSALESV 171
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,575,562
Number of Sequences: 37544
Number of extensions: 539407
Number of successful extensions: 1489
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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