Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_O23
(505 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12 p... 109 7e-24
BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12 p... 109 7e-24
BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12 p... 109 7e-24
AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12 p... 109 7e-24
AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12 p... 109 7e-24
X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12 pro... 102 6e-22
M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and DNA-dam... 38 0.026
L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein. 38 0.026
BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and DNA-d... 38 0.026
AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and DNA-d... 38 0.026
AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and DNA-d... 38 0.026
M73980-1|AAA60614.1| 2444|Homo sapiens TAN1 protein. 29 7.0
AL592301-5|CAI13934.1| 2555|Homo sapiens Notch homolog 1, transl... 29 7.0
AL354671-1|CAI16149.1| 2555|Homo sapiens Notch homolog 1, transl... 29 7.0
AF308602-1|AAG33848.1| 2556|Homo sapiens NOTCH 1 protein. 29 7.0
AB209873-1|BAD93110.1| 2067|Homo sapiens notch1 preproprotein va... 29 7.0
>BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 109 bits (261), Expect = 7e-24
Identities = 53/73 (72%), Positives = 58/73 (79%)
Frame = -1
Query: 415 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 236
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHQIPLVQ 197
+ALC EHQI L++
Sbjct: 66 EALCAEHQINLIK 78
Score = 52.0 bits (119), Expect = 1e-06
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -2
Query: 231 LCATNIRFHLYKVDNNKKLGEWAGLCKIDKDGKXKE 124
LCA + + +L KVD+NKKLGEW GLCKID++GK ++
Sbjct: 68 LCAEH-QINLIKVDDNKKLGEWVGLCKIDREGKPRK 102
Score = 37.9 bits (84), Expect = 0.020
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = -3
Query: 152 RLTRMARXRKIVGCSCVVIKDFGR 81
++ R + RK+VGCSCVV+KD+G+
Sbjct: 93 KIDREGKPRKVVGCSCVVVKDYGK 116
>BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 109 bits (261), Expect = 7e-24
Identities = 53/73 (72%), Positives = 58/73 (79%)
Frame = -1
Query: 415 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 236
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHQIPLVQ 197
+ALC EHQI L++
Sbjct: 66 EALCAEHQINLIK 78
Score = 52.0 bits (119), Expect = 1e-06
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -2
Query: 231 LCATNIRFHLYKVDNNKKLGEWAGLCKIDKDGKXKE 124
LCA + + +L KVD+NKKLGEW GLCKID++GK ++
Sbjct: 68 LCAEH-QINLIKVDDNKKLGEWVGLCKIDREGKPRK 102
Score = 37.9 bits (84), Expect = 0.020
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = -3
Query: 152 RLTRMARXRKIVGCSCVVIKDFGR 81
++ R + RK+VGCSCVV+KD+G+
Sbjct: 93 KIDREGKPRKVVGCSCVVVKDYGK 116
>BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 109 bits (261), Expect = 7e-24
Identities = 53/73 (72%), Positives = 58/73 (79%)
Frame = -1
Query: 415 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 236
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHQIPLVQ 197
+ALC EHQI L++
Sbjct: 66 EALCAEHQINLIK 78
Score = 52.0 bits (119), Expect = 1e-06
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -2
Query: 231 LCATNIRFHLYKVDNNKKLGEWAGLCKIDKDGKXKE 124
LCA + + +L KVD+NKKLGEW GLCKID++GK ++
Sbjct: 68 LCAEH-QINLIKVDDNKKLGEWVGLCKIDREGKPRK 102
Score = 37.9 bits (84), Expect = 0.020
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = -3
Query: 152 RLTRMARXRKIVGCSCVVIKDFGR 81
++ R + RK+VGCSCVV+KD+G+
Sbjct: 93 KIDREGKPRKVVGCSCVVVKDYGK 116
>AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 109 bits (261), Expect = 7e-24
Identities = 53/73 (72%), Positives = 58/73 (79%)
Frame = -1
Query: 415 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 236
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHQIPLVQ 197
+ALC EHQI L++
Sbjct: 66 EALCAEHQINLIK 78
Score = 52.0 bits (119), Expect = 1e-06
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -2
Query: 231 LCATNIRFHLYKVDNNKKLGEWAGLCKIDKDGKXKE 124
LCA + + +L KVD+NKKLGEW GLCKID++GK ++
Sbjct: 68 LCAEH-QINLIKVDDNKKLGEWVGLCKIDREGKPRK 102
Score = 37.9 bits (84), Expect = 0.020
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = -3
Query: 152 RLTRMARXRKIVGCSCVVIKDFGR 81
++ R + RK+VGCSCVV+KD+G+
Sbjct: 93 KIDREGKPRKVVGCSCVVVKDYGK 116
>AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 109 bits (261), Expect = 7e-24
Identities = 53/73 (72%), Positives = 58/73 (79%)
Frame = -1
Query: 415 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 236
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHQIPLVQ 197
+ALC EHQI L++
Sbjct: 66 EALCAEHQINLIK 78
Score = 52.0 bits (119), Expect = 1e-06
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -2
Query: 231 LCATNIRFHLYKVDNNKKLGEWAGLCKIDKDGKXKE 124
LCA + + +L KVD+NKKLGEW GLCKID++GK ++
Sbjct: 68 LCAEH-QINLIKVDDNKKLGEWVGLCKIDREGKPRK 102
Score = 37.9 bits (84), Expect = 0.020
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = -3
Query: 152 RLTRMARXRKIVGCSCVVIKDFGR 81
++ R + RK+VGCSCVV+KD+G+
Sbjct: 93 KIDREGKPRKVVGCSCVVVKDYGK 116
>X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 102 bits (245), Expect = 6e-22
Identities = 51/73 (69%), Positives = 56/73 (76%)
Frame = -1
Query: 415 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 236
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCV A NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
Query: 235 QALCNEHQIPLVQ 197
+AL EHQI L++
Sbjct: 66 EALLAEHQINLIK 78
Score = 47.6 bits (108), Expect = 2e-05
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = -2
Query: 213 RFHLYKVDNNKKLGEWAGLCKIDKDGKXKE 124
+ +L KVD+NKKLGEW GLCKID++G ++
Sbjct: 73 QINLIKVDDNKKLGEWVGLCKIDREGNPRK 102
Score = 37.1 bits (82), Expect = 0.035
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -3
Query: 152 RLTRMARXRKIVGCSCVVIKDFGR 81
++ R RK+VGCSCVV+KD+G+
Sbjct: 93 KIDREGNPRKVVGCSCVVVKDYGK 116
>M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible protein protein.
Length = 165
Score = 37.5 bits (83), Expect = 0.026
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = -1
Query: 391 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE------AAYKKLV 236
V AL+EVL AL + G++EAAK L D VLC+LA + D+ + L+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
Query: 235 QALCNEHQIPLVQ 197
QA C E+ I +++
Sbjct: 79 QAFCCENDINILR 91
>L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein.
Length = 165
Score = 37.5 bits (83), Expect = 0.026
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = -1
Query: 391 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE------AAYKKLV 236
V AL+EVL AL + G++EAAK L D VLC+LA + D+ + L+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
Query: 235 QALCNEHQIPLVQ 197
QA C E+ I +++
Sbjct: 79 QAFCCENDINILR 91
>BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 37.5 bits (83), Expect = 0.026
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = -1
Query: 391 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE------AAYKKLV 236
V AL+EVL AL + G++EAAK L D VLC+LA + D+ + L+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
Query: 235 QALCNEHQIPLVQ 197
QA C E+ I +++
Sbjct: 79 QAFCCENDINILR 91
>AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 37.5 bits (83), Expect = 0.026
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = -1
Query: 391 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE------AAYKKLV 236
V AL+EVL AL + G++EAAK L D VLC+LA + D+ + L+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
Query: 235 QALCNEHQIPLVQ 197
QA C E+ I +++
Sbjct: 79 QAFCCENDINILR 91
>AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 37.5 bits (83), Expect = 0.026
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = -1
Query: 391 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE------AAYKKLV 236
V AL+EVL AL + G++EAAK L D VLC+LA + D+ + L+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
Query: 235 QALCNEHQIPLVQ 197
QA C E+ I +++
Sbjct: 79 QAFCCENDINILR 91
>M73980-1|AAA60614.1| 2444|Homo sapiens TAN1 protein.
Length = 2444
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = +3
Query: 105 TGAADNFPXPCHPCQSCRDQPILQAFCCCQPCTSGI*C 218
T D P PCH SC D I AFC C P G C
Sbjct: 907 TDIDDCRPNPCHNGGSCTD-GINTAFCDCLPGFRGTFC 943
>AL592301-5|CAI13934.1| 2555|Homo sapiens Notch homolog 1,
translocation-associated (Drosophila) protein.
Length = 2555
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = +3
Query: 105 TGAADNFPXPCHPCQSCRDQPILQAFCCCQPCTSGI*C 218
T D P PCH SC D I AFC C P G C
Sbjct: 906 TDIDDCRPNPCHNGGSCTD-GINTAFCDCLPGFRGTFC 942
>AL354671-1|CAI16149.1| 2555|Homo sapiens Notch homolog 1,
translocation-associated (Drosophila) protein.
Length = 2555
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = +3
Query: 105 TGAADNFPXPCHPCQSCRDQPILQAFCCCQPCTSGI*C 218
T D P PCH SC D I AFC C P G C
Sbjct: 906 TDIDDCRPNPCHNGGSCTD-GINTAFCDCLPGFRGTFC 942
>AF308602-1|AAG33848.1| 2556|Homo sapiens NOTCH 1 protein.
Length = 2556
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = +3
Query: 105 TGAADNFPXPCHPCQSCRDQPILQAFCCCQPCTSGI*C 218
T D P PCH SC D I AFC C P G C
Sbjct: 907 TDIDDCRPNPCHNGGSCTD-GINTAFCDCLPGFRGTFC 943
>AB209873-1|BAD93110.1| 2067|Homo sapiens notch1 preproprotein
variant protein.
Length = 2067
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = +3
Query: 105 TGAADNFPXPCHPCQSCRDQPILQAFCCCQPCTSGI*C 218
T D P PCH SC D I AFC C P G C
Sbjct: 418 TDIDDCRPNPCHNGGSCTD-GINTAFCDCLPGFRGTFC 454
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,942,109
Number of Sequences: 237096
Number of extensions: 1656938
Number of successful extensions: 4298
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4295
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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