Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_O22
(699 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 29 0.14
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 27 0.43
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 27 0.43
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 27 0.75
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 27 0.75
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 27 0.75
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 27 0.75
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 27 0.75
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 27 0.75
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 26 0.99
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 26 0.99
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 26 0.99
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 4.0
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 23 9.2
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 29.1 bits (62), Expect = 0.14
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 481 LRQTVFEIRHPNDCKGAPQISNIQEDSDNAGCSLYVACDTKANQFQKR 338
L+Q E R +GAP++++ Q + DN SLY A +T Q +R
Sbjct: 1077 LQQDWDETRRELAEQGAPRVADNQHNQDNDRTSLYSARNTSEEQRGRR 1124
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 27.5 bits (58), Expect = 0.43
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 570 PPIYKPILPVYGPPPKPSYGVPYG 499
PP P P GPPP P G P G
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLG 604
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 27.5 bits (58), Expect = 0.43
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -1
Query: 393 LAVVCMLLVIPKLINF 346
LA+VCM LV+P+L N+
Sbjct: 272 LAIVCMNLVVPQLFNY 287
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 26.6 bits (56), Expect = 0.75
Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 435 PLQSLGCLISKTVCRRN*NRPCHTVHRKMVSGAVRRLGV-WVC 560
PL++ GC+IS C +R C + +++ + + + W C
Sbjct: 22 PLEATGCIISCAYCDATFHRGCCKLPPELIDAVLSNVDLHWSC 64
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.6 bits (56), Expect = 0.75
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -3
Query: 676 PSVP*LWSTKPFVWTSGTNIWPAGSDIRTTDSVVWATDLQTHTPSLRTAPETILRCTVW 500
P+ P W T P + T+ T IW TD W+ T T S + P T TVW
Sbjct: 141 PTTPSQW-TDPTITTT-TPIW--------TDPTTWSAPTTTTTWSDQPPPPTTTTTTVW 189
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.6 bits (56), Expect = 0.75
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -3
Query: 676 PSVP*LWSTKPFVWTSGTNIWPAGSDIRTTDSVVWATDLQTHTPSLRTAPETILRCTVW 500
P+ P W T P + T+ T IW TD W+ T T S + P T TVW
Sbjct: 141 PTTPSQW-TDPTITTT-TPIW--------TDPTTWSAPTTTTTWSDQPPPPTTTTTTVW 189
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.6 bits (56), Expect = 0.75
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -3
Query: 676 PSVP*LWSTKPFVWTSGTNIWPAGSDIRTTDSVVWATDLQTHTPSLRTAPETILRCTVW 500
P+ P W T P + T+ T IW TD W+ T T S + P T TVW
Sbjct: 141 PTTPSQW-TDPTITTT-TPIW--------TDPTTWSAPTTTTTWSDQPPPPTTTTTTVW 189
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.6 bits (56), Expect = 0.75
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -3
Query: 676 PSVP*LWSTKPFVWTSGTNIWPAGSDIRTTDSVVWATDLQTHTPSLRTAPETILRCTVW 500
P+ P W T P + T+ T IW TD W+ T T S + P T TVW
Sbjct: 141 PTTPSQW-TDPTITTT-TPIW--------TDPTTWSAPTTTTTWSDQPRPPTTTTTTVW 189
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.6 bits (56), Expect = 0.75
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -3
Query: 676 PSVP*LWSTKPFVWTSGTNIWPAGSDIRTTDSVVWATDLQTHTPSLRTAPETILRCTVW 500
P+ P W T P + T+ T IW TD W+ T T S + P T TVW
Sbjct: 141 PTTPSQW-TDPTITTT-TPIW--------TDPTTWSAPTTTTTWSDQPRPPTTTTTTVW 189
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 26.2 bits (55), Expect = 0.99
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = -3
Query: 676 PSVP*LWSTKPFVWTSGTNIWPAGSDIRTTDSVVWATDLQTHTPSLRTAPETILRCTVW 500
P+ P W T P + T+ T +W TD W+ T T S + P T TVW
Sbjct: 140 PTTPSQW-TDPTITTT-TPVW--------TDPTTWSAPTTTTTWSDQPPPPTTTTTTVW 188
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 26.2 bits (55), Expect = 0.99
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = -3
Query: 676 PSVP*LWSTKPFVWTSGTNIWPAGSDIRTTDSVVWATDLQTHTPSLRTAPETILRCTVW 500
P+ P W T P + T+ T +W TD W+ T T S + P T TVW
Sbjct: 140 PTTPSQW-TDPTITTT-TPVW--------TDPTTWSAPTTTTTWSDQPPPPTTTTTTVW 188
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 26.2 bits (55), Expect = 0.99
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = -3
Query: 676 PSVP*LWSTKPFVWTSGTNIWPAGSDIRTTDSVVWATDLQTHTPSLRTAPETILRCTVW 500
P+ P W T P + T+ T +W TD W+ T T S + P T TVW
Sbjct: 141 PTTPSQW-TDPTITTT-TPVW--------TDPTTWSAPTTTTTWSDQPPPPTTTTTTVW 189
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 24.2 bits (50), Expect = 4.0
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Frame = -1
Query: 612 PPAQTYGPPTQSYGPP-----IYKPILPVYGPPPKP 520
PPA+ PPT + P + P +P+ PP +P
Sbjct: 102 PPARPSQPPTTRFAPEPRAEVKFVPSVPLKTPPVRP 137
Score = 24.2 bits (50), Expect = 4.0
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
Frame = -1
Query: 612 PPAQTYGPPTQSYGPPIYKPILPVYGPPPK--P-----SYGVPYGMAG 490
P AQ P PP +P P+ GP P+ P S G+P GM G
Sbjct: 249 PSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVG 296
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.0 bits (47), Expect = 9.2
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 5/22 (22%)
Frame = -1
Query: 537 GPPPKPSYGVP-----YGMAGF 487
G P +P YG+P GMAGF
Sbjct: 495 GEPGQPGYGIPGQKGNAGMAGF 516
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,823
Number of Sequences: 2352
Number of extensions: 15895
Number of successful extensions: 39
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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