Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_O19
         (510 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063645-1|AAH63645.1|  918|Homo sapiens USP9X protein protein.        29   7.1  
AL391259-2|CAD13527.2| 2547|Homo sapiens ubiquitin specific pept...    29   7.1  
AL109797-1|CAD18900.2| 2547|Homo sapiens ubiquitin specific pept...    29   7.1  
AB209666-1|BAD92903.1|  867|Homo sapiens USP9X protein variant p...    29   7.1  

>BC063645-1|AAH63645.1|  918|Homo sapiens USP9X protein protein.
          Length = 918

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 20/101 (19%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
 Frame = -3

Query: 316 ECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCAYKKFGALDENN---RIISQVAAASFP 146
           +C     +GE    +++   YR  + + N     Y++   +D+++   R IS++A  + P
Sbjct: 283 QCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDQDDELIRYISELAITTRP 342

Query: 145 KDIDVVTVIESCGKEDG----NTPVEQVFKYFKCFXEKLAC 35
             I + + IE   ++      +  ++   +YF+   + L C
Sbjct: 343 HQIIMPSAIERSVRKQNVQFMHNRMQYSMEYFQFMKKLLTC 383


>AL391259-2|CAD13527.2| 2547|Homo sapiens ubiquitin specific peptidase
            9, X-linked protein.
          Length = 2547

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 20/101 (19%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
 Frame = -3

Query: 316  ECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCAYKKFGALDENN---RIISQVAAASFP 146
            +C     +GE    +++   YR  + + N     Y++   +D+++   R IS++A  + P
Sbjct: 1912 QCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDQDDELIRYISELAITTRP 1971

Query: 145  KDIDVVTVIESCGKEDG----NTPVEQVFKYFKCFXEKLAC 35
              I + + IE   ++      +  ++   +YF+   + L C
Sbjct: 1972 HQIIMPSAIERSVRKQNVQFMHNRMQYSMEYFQFMKKLLTC 2012


>AL109797-1|CAD18900.2| 2547|Homo sapiens ubiquitin specific peptidase
            9, X-linked protein.
          Length = 2547

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 20/101 (19%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
 Frame = -3

Query: 316  ECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCAYKKFGALDENN---RIISQVAAASFP 146
            +C     +GE    +++   YR  + + N     Y++   +D+++   R IS++A  + P
Sbjct: 1912 QCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDQDDELIRYISELAITTRP 1971

Query: 145  KDIDVVTVIESCGKEDG----NTPVEQVFKYFKCFXEKLAC 35
              I + + IE   ++      +  ++   +YF+   + L C
Sbjct: 1972 HQIIMPSAIERSVRKQNVQFMHNRMQYSMEYFQFMKKLLTC 2012


>AB209666-1|BAD92903.1|  867|Homo sapiens USP9X protein variant
           protein.
          Length = 867

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 20/101 (19%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
 Frame = -3

Query: 316 ECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCAYKKFGALDENN---RIISQVAAASFP 146
           +C     +GE    +++   YR  + + N     Y++   +D+++   R IS++A  + P
Sbjct: 232 QCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDQDDELIRYISELAITTRP 291

Query: 145 KDIDVVTVIESCGKEDG----NTPVEQVFKYFKCFXEKLAC 35
             I + + IE   ++      +  ++   +YF+   + L C
Sbjct: 292 HQIIMPSAIERSVRKQNVQFMHNRMQYSMEYFQFMKKLLTC 332


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,393,704
Number of Sequences: 237096
Number of extensions: 1340518
Number of successful extensions: 3232
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3231
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)