Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_O16
         (792 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.66 
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    26   1.5  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    25   2.0  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    25   2.0  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 468 DESAKGRDGAE-SEADASPQXQGDPADASRVGAESQTGHDQITGARYKG 325
           + +AK R GA+ +   A+PQ   +P DA     ++    D+  G R  G
Sbjct: 2   NSAAKRRSGADGANKAAAPQQAPEPMDADAADDDALMSEDEEGGTRIGG 50


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -1

Query: 405 GDPADASRVGAESQTGHDQITGARYKGFQTAFHLYKCPGNPYRTTLRTALTSFYNY 238
           G+PA  S+  + SQ    ++         T  HLY+CP       L   LT+FYN+
Sbjct: 260 GEPA--SQRPSSSQMQRPKVQQLDTAAAPTNHHLYRCPA---CGNLFVELTNFYNH 310


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 640 GVREGAVPQALLRRGVGHFLLVAVESXLQTGALSRWATLAMLTLRW 777
           G+    +P   L +  GHFL   V   +    +  W TLAM+ +++
Sbjct: 10  GLVADLMPNIRLMQASGHFLFRYVTGPILIRKVYSWWTLAMVLIQF 55


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 640 GVREGAVPQALLRRGVGHFLLVAVESXLQTGALSRWATLAMLTLRW 777
           G+    +P   L +  GHFL   V   +    +  W TLAM+ +++
Sbjct: 10  GLVADLMPNIRLMQASGHFLFRYVTGPILIRKVYSWWTLAMVLIQF 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,130
Number of Sequences: 2352
Number of extensions: 11867
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)