Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_O16
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81104-3|CAD89749.1|  660|Caenorhabditis elegans Hypothetical pr...    31   0.71 
L23648-8|AAA28030.1|  503|Caenorhabditis elegans Hypothetical pr...    31   0.71 
Z71262-8|CAA95812.1|  302|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical pr...    29   3.8  

>Z81104-3|CAD89749.1|  660|Caenorhabditis elegans Hypothetical
           protein M199.5 protein.
          Length = 660

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 468 DESAKGRDGAESEADASPQXQGDPADASRVGAESQTGHDQITGAR 334
           D+  KG DGA+  AD +P  +GD  +    G +   G D   GA+
Sbjct: 374 DKGEKGTDGAKG-ADGTPGAKGDKGEKGLDGPKGDKGADGTPGAK 417



 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 456 KGRDGAESEADASPQXQGDPADASRVGAESQTGHDQITGAR 334
           KG DGA+  AD +P  +GD  +    G +   G D   GA+
Sbjct: 282 KGADGAKG-ADGTPGQKGDKGEKGLDGPKGDKGADGTPGAK 321



 Score = 29.1 bits (62), Expect = 3.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 456 KGRDGAESEADASPQXQGDPADASRVGAESQTGHDQITGAR 334
           KG DGA+  AD +P  +GD  +    G +   G D   GA+
Sbjct: 441 KGADGAKG-ADGTPGQKGDKGEKGLDGPKGDKGADGTPGAK 480



 Score = 27.9 bits (59), Expect = 8.8
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 456 KGRDGAESEADASPQXQGDPADASRVGAESQTGHDQITG 340
           KG DGA+  AD +P  +GD       GA+   G    TG
Sbjct: 198 KGADGAKG-ADGTPGSKGDKGSDGAKGADGNPGSKGDTG 235


>L23648-8|AAA28030.1|  503|Caenorhabditis elegans Hypothetical
           protein F44B9.2 protein.
          Length = 503

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 26/116 (22%), Positives = 47/116 (40%)
 Frame = -1

Query: 693 VSDSTPEKRLRNRTFPDSANDREDIKSITKSDVIAYKADTLTKRPWQRNEDKYRLSAXXX 514
           V +  PE   +     +  N+   IK   ++D ++ K D  T      N   + +S    
Sbjct: 109 VPEPEPEVEAKQNVIVEKENE---IKDQQQNDQLSAKLDPKTPNSVDDNSMSFDISECER 165

Query: 513 XXESAVIEKDGDVARDESAKGRDGAESEADASPQXQGDPADASRVGAESQTGHDQI 346
              +A+ E + D+  D   K +  AE+    + +     ADA RV  ++   H Q+
Sbjct: 166 KFNTAIREAN-DILEDFDKKSKQVAENTKFVAKELAELAADAPRVFQKTIEDHSQV 220


>Z71262-8|CAA95812.1|  302|Caenorhabditis elegans Hypothetical
           protein F22D6.10 protein.
          Length = 302

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
 Frame = -1

Query: 489 KDGDVARDESAKGRDGAESEADASPQXQ----GDPADASR---VGAESQTGHDQITGAR 334
           +DG+   +E    +DG+ S   A P  +    G P +A R    G++ Q+G++  TG R
Sbjct: 120 QDGNTPSEEYGNSQDGSTSTCPAGPPGEQGPDGAPGEAGRDGQPGSDGQSGNEGPTGPR 178


>Z67990-1|CAA91932.1|  316|Caenorhabditis elegans Hypothetical
           protein F02D10.1 protein.
          Length = 316

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -1

Query: 453 GRDGAESEA-DASPQXQGDPADASRVGAESQTGHDQITGARYKG 325
           G+DGA S   +A P   G P  A   G + Q+G     G   KG
Sbjct: 222 GQDGASSAGGEAGPGPAGPPGPAGPAGPDGQSGSGSAGGPGPKG 265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,541,691
Number of Sequences: 27780
Number of extensions: 249591
Number of successful extensions: 834
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)