Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_O14
         (712 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69...    29   4.8  
04_03_0624 - 18115559-18115725,18115993-18116872                       28   6.4  

>03_01_0085 +
           690618-691012,691114-691193,691775-691959,692363-693320,
           693391-693518,693951-694010,694113-694163,694704-694821,
           694990-695915,695916-697707,697810-697943,698029-698526
          Length = 1774

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 28  KHTNYLCQYCVYNLLRISVSTSYFFLIR 111
           K  +Y+C  C Y+L ++ +    FF +R
Sbjct: 168 KAVHYMCYTCTYSLCKVCIKQGKFFSVR 195


>04_03_0624 - 18115559-18115725,18115993-18116872
          Length = 348

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -2

Query: 486 TRSXVYVGNINAXRLXRTEMWTTSRSYDSHYCY 388
           T   +Y GN+    +   E W   R   S+YCY
Sbjct: 57  TEGKLYAGNVELLNISLLEGWVRMRMPISNYCY 89


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,571,185
Number of Sequences: 37544
Number of extensions: 209117
Number of successful extensions: 280
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 280
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)