Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_O12
         (774 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051938-1|AAK93362.1|  318|Drosophila melanogaster LD41866p pro...   230   2e-60
AE014134-2862|AAF53625.1|  318|Drosophila melanogaster CG6412-PA...   230   2e-60

>AY051938-1|AAK93362.1|  318|Drosophila melanogaster LD41866p
           protein.
          Length = 318

 Score =  230 bits (562), Expect = 2e-60
 Identities = 113/241 (46%), Positives = 153/241 (63%), Gaps = 6/241 (2%)
 Frame = -1

Query: 774 MGWAKAXKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKF 595
           +GW+KA K+A R    GL+ V    N GA+VELNCETDFVA+ND F++ ++  A    ++
Sbjct: 71  LGWSKATKVADRATAHGLIGVLIRGNRGAMVELNCETDFVARNDTFKRFVDHVACMCLQY 130

Query: 594 AHTKLQAKGPITKMELDSEQLGTLHAEGGKKLSEILALFIGSVGENAVLRRAECWKANSE 415
                   G + K+  D++ L  L  E G+ L + LAL IG++GENA +RRA C+KAN+ 
Sbjct: 131 TDLT-DFDGDLWKLGFDADALRNLRTEEGRTLGDHLALLIGAIGENATIRRALCFKANN- 188

Query: 414 DVKIAGYTHPAPXXXXXXXS----GKYGALLAYKQPNDVEDIG--RQLCQHIVGCAPTKI 253
           D+K+ GY HPAP            GKYGA++AY+  + + D    + +CQ IVG  PTKI
Sbjct: 189 DLKLVGYAHPAPTNVGTTEGITQVGKYGAIVAYRSTHPLLDFEFHKSICQQIVGMKPTKI 248

Query: 252 GDKEKDKPAKNSDDETCLIFQEYLLDPSYTIEEILQKHNVEIIDYVRFSCGEVPESCMPG 73
           G+ +KDKPA+N DDETCLI QEYLLD   T+ E LQ+HN EI+DY RF CGE  E  +  
Sbjct: 249 GEYDKDKPAENKDDETCLIHQEYLLDADKTVGEALQEHNCEIVDYHRFECGEHTERSLEA 308

Query: 72  V 70
           +
Sbjct: 309 I 309


>AE014134-2862|AAF53625.1|  318|Drosophila melanogaster CG6412-PA
           protein.
          Length = 318

 Score =  230 bits (562), Expect = 2e-60
 Identities = 113/241 (46%), Positives = 153/241 (63%), Gaps = 6/241 (2%)
 Frame = -1

Query: 774 MGWAKAXKLAGRTALQGLVAVKFDKNHGALVELNCETDFVAKNDKFQKMIEDAAIASFKF 595
           +GW+KA K+A R    GL+ V    N GA+VELNCETDFVA+ND F++ ++  A    ++
Sbjct: 71  LGWSKATKVADRATAHGLIGVLIRGNRGAMVELNCETDFVARNDTFKRFVDHVACMCLQY 130

Query: 594 AHTKLQAKGPITKMELDSEQLGTLHAEGGKKLSEILALFIGSVGENAVLRRAECWKANSE 415
                   G + K+  D++ L  L  E G+ L + LAL IG++GENA +RRA C+KAN+ 
Sbjct: 131 TDLT-DFDGDLWKLGFDADALRNLRTEEGRTLGDHLALLIGAIGENATIRRALCFKANN- 188

Query: 414 DVKIAGYTHPAPXXXXXXXS----GKYGALLAYKQPNDVEDIG--RQLCQHIVGCAPTKI 253
           D+K+ GY HPAP            GKYGA++AY+  + + D    + +CQ IVG  PTKI
Sbjct: 189 DLKLVGYAHPAPTNVGTTEGITQVGKYGAIVAYRSTHPLLDFEFHKSICQQIVGMKPTKI 248

Query: 252 GDKEKDKPAKNSDDETCLIFQEYLLDPSYTIEEILQKHNVEIIDYVRFSCGEVPESCMPG 73
           G+ +KDKPA+N DDETCLI QEYLLD   T+ E LQ+HN EI+DY RF CGE  E  +  
Sbjct: 249 GEYDKDKPAENKDDETCLIHQEYLLDADKTVGEALQEHNCEIVDYHRFECGEHTERSLEA 308

Query: 72  V 70
           +
Sbjct: 309 I 309


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,053,536
Number of Sequences: 53049
Number of extensions: 839256
Number of successful extensions: 2367
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2359
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)