Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_O08
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006769-9|AAF60585.2|  779|Caenorhabditis elegans Hypothetical ...    37   0.019
AC006645-2|AAF39844.2|  796|Caenorhabditis elegans Hypothetical ...    37   0.019
U80025-2|AAD32270.3|  806|Caenorhabditis elegans Hypothetical pr...    35   0.057
AF022985-2|AAB69972.2|  195|Caenorhabditis elegans Hypothetical ...    34   0.13 
AF106577-10|AAC78189.1|  796|Caenorhabditis elegans Hypothetical...    31   0.70 
Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical p...    30   2.1  
AC006830-1|AAK68610.3|  802|Caenorhabditis elegans Hypothetical ...    29   5.0  
AF101316-5|AAC69233.2|   99|Caenorhabditis elegans Hypothetical ...    28   8.7  

>AC006769-9|AAF60585.2|  779|Caenorhabditis elegans Hypothetical
           protein Y45G12C.11 protein.
          Length = 779

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +1

Query: 142 FFIPVS*SEYLAKEIKLLYCHRYFDTCAILQFLKEFNFDKDL*GD 276
           F+IP S SEY A  +++ Y +  F   A+ +FLK  NF   L G+
Sbjct: 666 FYIPTSESEYYASLMRIFYENNLFLEIAVNKFLKSVNFQTSLSGN 710


>AC006645-2|AAF39844.2|  796|Caenorhabditis elegans Hypothetical
           protein F56A4.6 protein.
          Length = 796

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +1

Query: 142 FFIPVS*SEYLAKEIKLLYCHRYFDTCAILQFLKEFNFDKDL*GD 276
           F+IP S SEY A  +++ Y +  F   A+ +FLK  NF   L G+
Sbjct: 683 FYIPTSESEYYASLMRIFYENNLFLEIAVNKFLKSVNFQTSLSGN 727


>U80025-2|AAD32270.3|  806|Caenorhabditis elegans Hypothetical
           protein F02C9.2 protein.
          Length = 806

 Score = 35.1 bits (77), Expect = 0.057
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +1

Query: 142 FFIPVS*SEYLAKEIKLLYCHRYFDTCAILQFLKEFNFDKDL*GD 276
           F+IP S SEY A  +++ Y ++ F   A+ +FLK  N    L G+
Sbjct: 689 FYIPTSESEYYASLMRIFYKNKLFLEIAVNKFLKSVNHQTSLSGN 733


>AF022985-2|AAB69972.2|  195|Caenorhabditis elegans Hypothetical
           protein T15B7.17 protein.
          Length = 195

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +1

Query: 142 FFIPVS*SEYLAKEIKLLYCHRYFDTCAILQFLKEFNFDKDL*G 273
           F+IP S  +Y A  +++ Y ++ F   A+ +FLK  N+   L G
Sbjct: 58  FYIPASEIDYYASLMRIFYANKLFLEIAVNKFLKSVNYQTSLSG 101


>AF106577-10|AAC78189.1|  796|Caenorhabditis elegans Hypothetical
           protein F46F5.11 protein.
          Length = 796

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +1

Query: 142 FFIPVS*SEYLAKEIKLLYCHRYFDTCAILQFLKEFNFDKDL 267
           ++IP S SEY A  ++L Y ++ F   A+ +FL+  N    L
Sbjct: 676 YYIPTSESEYYAHLMRLFYDNQLFLEIAVNRFLRSVNHSTSL 717


>Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical
           protein C38D9.5 protein.
          Length = 1213

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -1

Query: 446 ATIIVISAYFIYRSLRKYRYFLSLLLESVGWVLGY*VMESSMIKF 312
           A +IV++   ++  +RKYR +  LL +   WVL     E+  + F
Sbjct: 785 AILIVVAGVLLFLKIRKYRQYSKLLHDPEYWVLLSYTRETEPVDF 829


>Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical
           protein C38D9.5 protein.
          Length = 1213

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -1

Query: 446 ATIIVISAYFIYRSLRKYRYFLSLLLESVGWVLGY*VMESSMIKF 312
           A +IV++   ++  +RKYR +  LL +   WVL     E+  + F
Sbjct: 785 AILIVVAGVLLFLKIRKYRQYSKLLHDPEYWVLLSYTRETEPVDF 829


>AC006830-1|AAK68610.3|  802|Caenorhabditis elegans Hypothetical
           protein ZK105.3 protein.
          Length = 802

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +1

Query: 142 FFIPVS*SEYLAKEIKLLYCHRYFDTCAILQFLKEFNFDKDL 267
           ++IP   SEY A  ++L Y +++F   A+ +FL+  +    L
Sbjct: 679 YYIPTLQSEYYASLMRLFYENQFFLEIAVNRFLRSVDHSTSL 720


>AF101316-5|AAC69233.2|   99|Caenorhabditis elegans Hypothetical
           protein F52F10.1 protein.
          Length = 99

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 173 WPKKSNYCTVIGTLIRVQFYNF*KNLISTKIF 268
           WP K+N C ++ T    + Y F  N +S + F
Sbjct: 3   WPSKTNKCQILHTFSFSRIYFFNHNSVSFQFF 34


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,792,021
Number of Sequences: 27780
Number of extensions: 352803
Number of successful extensions: 817
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)