Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_O08
         (782 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.79 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.79 
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    24   1.4  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    24   1.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   3.2  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   4.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = +1

Query: 310 LNLIILDSITQ*PNTHPTDSNNKERKYLYFLNDL-YIK*AEITIIV--AELRENSRLFCT 480
           LNLI + S  Q  +TH  D   + +  +  LN L   K ++I ++    +L  +   F  
Sbjct: 485 LNLIFMSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLESSHDSFQA 544

Query: 481 CDKTAERQASYAVTVTREQHVALNR 555
             ++ E   S  +  T EQ +AL +
Sbjct: 545 ALRSIENYYSGKLERTEEQRIALRK 569


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.0 bits (52), Expect = 0.79
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = +1

Query: 310 LNLIILDSITQ*PNTHPTDSNNKERKYLYFLNDL-YIK*AEITIIV--AELRENSRLFCT 480
           LNLI + S  Q  +TH  D   + +  +  LN L   K ++I ++    +L  +   F  
Sbjct: 523 LNLIFMSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLESSHDSFQA 582

Query: 481 CDKTAERQASYAVTVTREQHVALNR 555
             ++ E   S  +  T EQ +AL +
Sbjct: 583 ALRSIENYYSGKLERTEEQRIALRK 607


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 663 GCGPCSEQALRPRALSRTSLRGGCGMSSP 749
           G  PC     R ++L+   LRG C   SP
Sbjct: 57  GEAPCDPVGRRLKSLAPLVLRGACPQCSP 85


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 663 GCGPCSEQALRPRALSRTSLRGGCGMSSP 749
           G  PC     R ++L+   LRG C   SP
Sbjct: 57  GEAPCDPVGRRLKSLAPLVLRGACPQCSP 85


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -2

Query: 712 LLSARGRRACSEQGPHPS-LGYL 647
           L SA GR AC   G +PS  G+L
Sbjct: 290 LSSALGRSACHSPGVYPSTAGFL 312



 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 138 YFFHSGILIRIFGQR 182
           Y++  GIL ++ GQR
Sbjct: 520 YYYQRGILAKVDGQR 534


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 442 VAELRENSRLFCTCDKTAERQASY 513
           +AE+R+N  +    ++TA +QA+Y
Sbjct: 377 LAEMRDNYGISAGLNRTAGQQAAY 400


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 143 FSFRYPDPNIWPKKSNYCTVIGTLIRVQFYN 235
           F  RYP+ ++ P   NY     T  R+   N
Sbjct: 434 FQCRYPNASVTPYNKNYTKFCSTEKRLTKQN 464


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,850
Number of Sequences: 438
Number of extensions: 4723
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)