Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_O07
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical ... 30 1.5
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 29 3.4
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 29 4.5
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 29 4.5
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 29 4.5
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 4.5
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 28 5.9
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 28 5.9
L13200-7|AAA28189.1| 206|Caenorhabditis elegans Prion-like-(q/n... 28 5.9
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 28 5.9
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 7.8
U70852-5|AAK29817.2| 322|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical
protein T19B10.9 protein.
Length = 588
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 285 PHP-ECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPP 139
P P E PP S P VP + +P + A ++++ P A PPP
Sbjct: 15 PGPGEACQPPMPASSFQNNGVPMTVPSSPQYIPANGAPLDQSGPIAPPPP 64
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 128 GSTVGGGVACGDASSTCAVCVGNCSRASGTTCGPTSPSEEHWKEGGCRHSGWG 286
G GGG CG C G C G G P GGC G G
Sbjct: 76 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG 128
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 128 GSTVGGGVACGDASSTCAVCVGNCSRASGTTCG 226
G GGG CG C G C G CG
Sbjct: 147 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCG 179
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 GSTVGGGVACGDASSTCAVCVGNCSRASGTTC-GPTSPSEEHWKEGGCRHSGWG 286
G GGG CG C G C G C G +S GGC G G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +2
Query: 128 GSTVGGGVACGDASSTCAVCVGNCSRASGTTC-GPTSPSEEHWKEGGCRHSGWG 286
G GGG CG C G C G C G +S GGC G G
Sbjct: 108 GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161
>AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical
protein W08E12.2 protein.
Length = 120
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 125 SGSTVGGGVACGDASSTCAVCVGNCSRASGTTCGP 229
S GGG G C C GN +G CGP
Sbjct: 17 SAQCFGGGCGGGCFGGNCGGCSGNNCGCNGNNCGP 51
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -1
Query: 652 RQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPEN 518
+Q + P Y P R++Q +Y P+Q+ + Y QQ +N
Sbjct: 39 QQQQQQGRPQQYAGYPPQRQQQQYNMNAYAPRQQQQQQYQQQQQN 83
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = -1
Query: 706 NPXYNPRAVGGGMAAFMYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYY--P 533
NP NP + G+ P Q P V P R + + V Q + V P
Sbjct: 63 NPVQNPNKLSTGLPPMTMMLPPTVQEPLPTPVKTPPLPRPP-GNLNPVQQPQIPVQRTPP 121
Query: 532 QQPENPIFSPTQATELA 482
Q P P+ P Q T++A
Sbjct: 122 QCPPPPVPHPPQITQMA 138
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = -2
Query: 285 PHPECLHPPSFQCSSDGEV---GPQVVPEARLQLPTHTAQV--EEASPQA--TPPPTVDP 127
P P PP+ + + P+ PEA Q+P TAQ+ E A P+A P PT P
Sbjct: 375 PPPPAPPPPAPAVPEEAQAPTPAPEEAPEA--QIPAETAQIPPENAVPEAPEEPAPTTTP 432
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Frame = -2
Query: 285 PHPECLHPPSFQCSSDGEV---GPQVVPEARLQLPTHTAQV--EEASPQA--TPPPTVDP 127
P P PP+ + + P+ PEA Q+P TAQ+ E A P+A P PT P
Sbjct: 387 PPPPAPPPPAPAVPEEAQAPTPAPEEAPEA--QIPAETAQIPPENAVPEAPEEPAPTTTP 444
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 568 YVPQQENEVYYPQQPENPIFSPTQATELADPTEKVE 461
YVPQ+ P PE +P+Q + +PT +E
Sbjct: 1812 YVPQETQAPIAPSNPEPVQPNPSQTVSIPEPTGNIE 1847
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 128 GSTVGGGVACGDASSTCAVCVGNCSRASGTTCGPTSPSEEH 250
G GGG +CG ++ C G S + C P + + H
Sbjct: 2136 GGCSGGGNSCGGGCNSGGSCGGGGGGCSSSCCQPQTSATSH 2176
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 213 PEARLQLPTHTAQVEEASPQATPPPTVDPDRTKN 112
PEA++ L T T + EAS P P +D + +N
Sbjct: 1047 PEAQIPLETRTLEPSEAS-SVQPEPPIDQEEAEN 1079
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 213 PEARLQLPTHTAQVEEASPQATPPPTVDPDRTKN 112
PEA++ L T T + EAS P P +D + +N
Sbjct: 1047 PEAQIPLETRTLEPSEAS-SVQPEPPIDQEEAEN 1079
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -2
Query: 696 TTPELWAVAWPRSCTASPKPHRRLQRARCTYLIVAARPLPIPATYRNK 553
TTPE + PRS + +P +RL T AA PIP K
Sbjct: 63 TTPEAPTTSEPRSHSRDARPTQRLPLTWSTVTPTAAPSQPIPTATSRK 110
>L13200-7|AAA28189.1| 206|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 96
protein.
Length = 206
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 562 PQQENEVYYPQQPENPIFSPTQATELA 482
PQQ+ Y PQQP +PI A +A
Sbjct: 6 PQQQQPGYQPQQPSHPIVGAGAAPTMA 32
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -2
Query: 282 HPECLHPPSFQCSSDGEVGPQVVPEARLQLPTHTAQVEEASPQATPPPTVDPDR 121
HP PP Q + E P +P+ + P TA A+P AT PT DP +
Sbjct: 217 HPPA--PPIRQAAHAAESSPPPIPQRKSSAPAPTA----AAPPATKEPT-DPKK 263
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -1
Query: 646 PEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPT 500
P++ QAPS +Q A T +PQ + P QP + I PT
Sbjct: 121 PQSVQAPSATPAGPLQAMQQAPAPTPGIPQMNQGAHLPPQP-HQIHQPT 168
>U70852-5|AAK29817.2| 322|Caenorhabditis elegans Hypothetical
protein F45E4.6 protein.
Length = 322
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 711 TIILXTTPELWAVAWPRSCTASPK 640
T+I+ T E WA+ WP S + K
Sbjct: 26 TLIVRDTQEYWALGWPTSISCDSK 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,390,930
Number of Sequences: 27780
Number of extensions: 330814
Number of successful extensions: 1361
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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