Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_O06
         (364 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    26   0.38 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   1.2  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   3.5  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   3.5  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    23   4.7  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          22   6.2  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   6.2  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          22   8.1  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -2

Query: 357  IAFQFKDAAQEGREGFGQTASKNTEEEGRIRWRQSQEEEVVQ 232
            + F     A EGRE       +    + RIR    Q++EVV+
Sbjct: 1091 LVFSASSEATEGRESAHPERREQVRPQRRIRQHMPQQKEVVE 1132


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 307 PNSLKKHRRRRKDPVAAKPRRR 242
           P + ++HRRRR  P     RRR
Sbjct: 327 PGAAERHRRRRPPPRRRHDRRR 348


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 121 SERLKVRGXPGEKSTHRA*GKRSHQ 47
           SER+   G  G  ST+ A   +SHQ
Sbjct: 808 SERMLPSGATGNNSTNSAYSMQSHQ 832


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 324 GREGFGQTASKNTEEEGRIR 265
           G  GFGQ  + NT+ EG ++
Sbjct: 505 GIVGFGQYCAANTDPEGAMK 524


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -1

Query: 307 PNSLKKHRRR-RKDPVAAKPRRRSGPKEKFVTS 212
           PN L++      K+PV  KP+    P+ + VT+
Sbjct: 125 PNDLQQEGETLNKEPVETKPQESEPPEMQEVTA 157


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -1

Query: 283 RRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCXK 161
           RRR+  +A   RRR  P+ +     TTR     P  R   K
Sbjct: 492 RRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRRKSTK 532


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 210 QLVTNFSFGP 239
           Q+ TNFSFGP
Sbjct: 338 QVYTNFSFGP 347


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 169  SFSYVGLSNNTWLFNLSRTFPLDHFFFLALPPPD 270
            S   + L++NT      R +P ++  F AL P D
Sbjct: 1391 SLQGITLTDNTRQLFFRRHYPSNNVSFCALDPDD 1424


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,328
Number of Sequences: 2352
Number of extensions: 7111
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)