Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_O06
(364 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p pro... 57 8e-09
AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB... 57 8e-09
AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA... 57 8e-09
U03289-1|AAA03464.1| 113|Drosophila melanogaster protein ( Dros... 47 9e-06
AY052131-1|AAK93555.1| 510|Drosophila melanogaster SD08104p pro... 28 4.2
AE014134-2339|AAF53293.1| 510|Drosophila melanogaster CG9302-PA... 28 4.2
AY119144-1|AAM51004.1| 511|Drosophila melanogaster RE48727p pro... 27 5.6
AY113416-1|AAM29421.1| 583|Drosophila melanogaster RE16761p pro... 27 5.6
AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p pro... 27 5.6
AE014298-588|AAF45912.2| 583|Drosophila melanogaster CG6414-PA ... 27 5.6
AE014297-3209|AAF56041.3| 872|Drosophila melanogaster CG4917-PB... 27 5.6
AE014297-3208|AAN13917.2| 853|Drosophila melanogaster CG4917-PA... 27 5.6
AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB... 27 5.6
AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC... 27 5.6
AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC... 27 5.6
AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB... 27 5.6
AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA... 27 5.6
AY071585-1|AAL49207.1| 486|Drosophila melanogaster RE64043p pro... 27 9.7
AE014296-1315|AAS65064.1| 486|Drosophila melanogaster CG32373-P... 27 9.7
AE014296-1314|AAN12048.1| 486|Drosophila melanogaster CG32373-P... 27 9.7
>AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p
protein.
Length = 117
Score = 56.8 bits (131), Expect = 8e-09
Identities = 42/112 (37%), Positives = 50/112 (44%)
Frame = -3
Query: 338 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLXQG 159
MPPKKDAK+SAKQPQ KLNNQVLFDK TYEKL +
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 158 SPTVQANHTCCRI*KIKGPRXPWREEHSSSLGKKVSSNR*SNXHGQVIYTRA 3
P + ++K R + L +K + H QVIYTRA
Sbjct: 61 VPAYKLITPSVVSERLK-IRGSLAKRALIELREKGLIKQVVQHHSQVIYTRA 111
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = -1
Query: 295 KKHRRRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCXKEVPQYKLITPAVVSE 116
+K +++++ K +++ K K + KEVP YKLITP+VVSE
Sbjct: 15 QKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAYKLITPSVVSE 74
Query: 115 RLKVRG 98
RLK+RG
Sbjct: 75 RLKIRG 80
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -2
Query: 93 LARRALIELREKGLIKQVVQH 31
LA+RALIELREKGLIKQVVQH
Sbjct: 82 LAKRALIELREKGLIKQVVQH 102
>AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB,
isoform B protein.
Length = 117
Score = 56.8 bits (131), Expect = 8e-09
Identities = 42/112 (37%), Positives = 50/112 (44%)
Frame = -3
Query: 338 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLXQG 159
MPPKKDAK+SAKQPQ KLNNQVLFDK TYEKL +
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 158 SPTVQANHTCCRI*KIKGPRXPWREEHSSSLGKKVSSNR*SNXHGQVIYTRA 3
P + ++K R + L +K + H QVIYTRA
Sbjct: 61 VPAYKLITPSVVSERLK-IRGSLAKRALIELREKGLIKQVVQHHSQVIYTRA 111
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = -1
Query: 295 KKHRRRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCXKEVPQYKLITPAVVSE 116
+K +++++ K +++ K K + KEVP YKLITP+VVSE
Sbjct: 15 QKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAYKLITPSVVSE 74
Query: 115 RLKVRG 98
RLK+RG
Sbjct: 75 RLKIRG 80
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -2
Query: 93 LARRALIELREKGLIKQVVQH 31
LA+RALIELREKGLIKQVVQH
Sbjct: 82 LAKRALIELREKGLIKQVVQH 102
>AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA,
isoform A protein.
Length = 117
Score = 56.8 bits (131), Expect = 8e-09
Identities = 42/112 (37%), Positives = 50/112 (44%)
Frame = -3
Query: 338 MPPKKDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLXQG 159
MPPKKDAK+SAKQPQ KLNNQVLFDK TYEKL +
Sbjct: 1 MPPKKDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKE 60
Query: 158 SPTVQANHTCCRI*KIKGPRXPWREEHSSSLGKKVSSNR*SNXHGQVIYTRA 3
P + ++K R + L +K + H QVIYTRA
Sbjct: 61 VPAYKLITPSVVSERLK-IRGSLAKRALIELREKGLIKQVVQHHSQVIYTRA 111
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = -1
Query: 295 KKHRRRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCXKEVPQYKLITPAVVSE 116
+K +++++ K +++ K K + KEVP YKLITP+VVSE
Sbjct: 15 QKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAYKLITPSVVSE 74
Query: 115 RLKVRG 98
RLK+RG
Sbjct: 75 RLKIRG 80
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -2
Query: 93 LARRALIELREKGLIKQVVQH 31
LA+RALIELREKGLIKQVVQH
Sbjct: 82 LAKRALIELREKGLIKQVVQH 102
>U03289-1|AAA03464.1| 113|Drosophila melanogaster protein (
Drosophila melanogasterSevelin ribosomal protein homolog
gene, partial cds. ).
Length = 113
Score = 46.8 bits (106), Expect = 9e-06
Identities = 38/108 (35%), Positives = 46/108 (42%)
Frame = -3
Query: 326 KDAKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXKLNNQVLFDKPTYEKLXQGSPTV 147
KDAK+SAKQPQ KLNNQVLFDK TYEKL + P
Sbjct: 1 KDAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAY 60
Query: 146 QANHTCCRI*KIKGPRXPWREEHSSSLGKKVSSNR*SNXHGQVIYTRA 3
+ ++K R + L +K + H QVIYTRA
Sbjct: 61 KLITPSVVSERLK-IRGSLDKRALIELREKGLIKQVVQHHSQVIYTRA 107
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = -1
Query: 295 KKHRRRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCXKEVPQYKLITPAVVSE 116
+K +++++ K +++ K K + KEVP YKLITP+VVSE
Sbjct: 11 QKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAYKLITPSVVSE 70
Query: 115 RLKVRG 98
RLK+RG
Sbjct: 71 RLKIRG 76
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -2
Query: 93 LARRALIELREKGLIKQVVQH 31
L +RALIELREKGLIKQVVQH
Sbjct: 78 LDKRALIELREKGLIKQVVQH 98
>AY052131-1|AAK93555.1| 510|Drosophila melanogaster SD08104p
protein.
Length = 510
Score = 27.9 bits (59), Expect = 4.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 308 PKPSRPSWAASLNWKAIHL 364
PKP P W+A N + +HL
Sbjct: 258 PKPKEPEWSADTNSEIVHL 276
>AE014134-2339|AAF53293.1| 510|Drosophila melanogaster CG9302-PA
protein.
Length = 510
Score = 27.9 bits (59), Expect = 4.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 308 PKPSRPSWAASLNWKAIHL 364
PKP P W+A N + +HL
Sbjct: 258 PKPKEPEWSADTNSEIVHL 276
>AY119144-1|AAM51004.1| 511|Drosophila melanogaster RE48727p
protein.
Length = 511
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1
Query: 226 KFVTS*TTRCCLINPHMRNCXKEVPQYKLITPA 128
+ +T+ TT C L+ P+M + K+ P++ + A
Sbjct: 234 QLITAITTACLLVLPYMTSSFKDTPRFNAMPRA 266
>AY113416-1|AAM29421.1| 583|Drosophila melanogaster RE16761p
protein.
Length = 583
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 150 CGTSLXQFLICGFIKQHLVVQLVTNFSFGPLLLLGFAAT 266
CG+ + F F+ H +V + NF GP LGF +T
Sbjct: 141 CGSGISSFYGPDFLLDHDIVLVSANFRLGP---LGFLST 176
>AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p
protein.
Length = 607
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 307 PNSLKKHRRRRKDPVAAKPRRRSGP 233
P+S + R R+ P++ PRRRS P
Sbjct: 128 PHSRSRSRLRKSPPLSPPPRRRSPP 152
>AE014298-588|AAF45912.2| 583|Drosophila melanogaster CG6414-PA
protein.
Length = 583
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 150 CGTSLXQFLICGFIKQHLVVQLVTNFSFGPLLLLGFAAT 266
CG+ + F F+ H +V + NF GP LGF +T
Sbjct: 141 CGSGISSFYGPDFLLDHDIVLVSANFRLGP---LGFLST 176
>AE014297-3209|AAF56041.3| 872|Drosophila melanogaster CG4917-PB,
isoform B protein.
Length = 872
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1
Query: 226 KFVTS*TTRCCLINPHMRNCXKEVPQYKLITPA 128
+ +T+ TT C L+ P+M + K+ P++ + A
Sbjct: 595 QLITAITTACLLVLPYMTSSFKDTPRFNAMPRA 627
>AE014297-3208|AAN13917.2| 853|Drosophila melanogaster CG4917-PA,
isoform A protein.
Length = 853
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1
Query: 226 KFVTS*TTRCCLINPHMRNCXKEVPQYKLITPA 128
+ +T+ TT C L+ P+M + K+ P++ + A
Sbjct: 576 QLITAITTACLLVLPYMTSSFKDTPRFNAMPRA 608
>AE014134-2656|AAG22436.2| 379|Drosophila melanogaster CG4793-PB,
isoform B protein.
Length = 379
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 190 SNNTWLFNLSRTFPLDHFF-FLALPPPDPSF 279
+NN L L+R LDH + LPPP+ +F
Sbjct: 189 ANNAALLFLARPLKLDHHIGLICLPPPNRNF 219
>AE014134-2655|AAN10922.1| 1022|Drosophila melanogaster CG4793-PC,
isoform C protein.
Length = 1022
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 190 SNNTWLFNLSRTFPLDHFF-FLALPPPDPSF 279
+NN L L+R LDH + LPPP+ +F
Sbjct: 189 ANNAALLFLARPLKLDHHIGLICLPPPNRNF 219
>AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC,
isoform C protein.
Length = 567
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 307 PNSLKKHRRRRKDPVAAKPRRRSGP 233
P+S + R R+ P++ PRRRS P
Sbjct: 88 PHSRSRSRLRKSPPLSPPPRRRSPP 112
>AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB,
isoform B protein.
Length = 607
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 307 PNSLKKHRRRRKDPVAAKPRRRSGP 233
P+S + R R+ P++ PRRRS P
Sbjct: 128 PHSRSRSRLRKSPPLSPPPRRRSPP 152
>AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA,
isoform A protein.
Length = 607
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 307 PNSLKKHRRRRKDPVAAKPRRRSGP 233
P+S + R R+ P++ PRRRS P
Sbjct: 128 PHSRSRSRLRKSPPLSPPPRRRSPP 152
>AY071585-1|AAL49207.1| 486|Drosophila melanogaster RE64043p
protein.
Length = 486
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 356 LLSNSKMPPKKDAKASAKQPQ 294
+L SK+PP KDA S + P+
Sbjct: 316 ILDGSKLPPSKDAPVSQEAPR 336
>AE014296-1315|AAS65064.1| 486|Drosophila melanogaster CG32373-PB,
isoform B protein.
Length = 486
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 356 LLSNSKMPPKKDAKASAKQPQ 294
+L SK+PP KDA S + P+
Sbjct: 316 ILDGSKLPPSKDAPVSQEAPR 336
>AE014296-1314|AAN12048.1| 486|Drosophila melanogaster CG32373-PA,
isoform A protein.
Length = 486
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 356 LLSNSKMPPKKDAKASAKQPQ 294
+L SK+PP KDA S + P+
Sbjct: 316 ILDGSKLPPSKDAPVSQEAPR 336
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,390,277
Number of Sequences: 53049
Number of extensions: 324830
Number of successful extensions: 914
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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