Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_O03
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 91 8e-19
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 51 1e-06
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 49 3e-06
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 40 0.002
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein. 37 0.019
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 36 0.026
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 34 0.10
U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical pr... 32 0.42
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 31 1.3
Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 2.9
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 2.9
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 29 5.1
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 29 5.1
AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical ... 29 5.1
AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical ... 28 6.8
U97549-5|AAO91739.1| 212|Caenorhabditis elegans Dopamine recept... 28 8.9
U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine recept... 28 8.9
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 28 8.9
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 28 8.9
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 91.1 bits (216), Expect = 8e-19
Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 1/226 (0%)
Frame = -1
Query: 747 GTSFVKYVXXXFNXXXXXXXXXXXXXXXAFLMNWTMVKDLLKTHLAVGPWIFIVVGAVMF 568
G + VKY+ N + + V D+L P + +V+G++
Sbjct: 5 GVTIVKYLLFLANLVLWVGGLSLIIVGSILQLKFDNVLDILGDERLATPILLLVIGSLCT 64
Query: 567 VIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXLFTYGESIKESIMDGVGVLFKK 388
++ FLGCCGAIRE++C+ V++A + +S + I + + +
Sbjct: 65 LLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVR 124
Query: 387 RSDANADEAAEAVFSELQRQFECCGNTGAINYGQF-TLPESCCVKKSILSTFAGNNCTVD 211
++ E+A + + + FECCG T + ++ F T+P+SCC+++ + A N +
Sbjct: 125 YHESRGVESA---WDKTHQLFECCGVTNSSDWLTFTTIPDSCCIEE--IEGCARENAPL- 178
Query: 210 AANPGCGPKIGELYQKWNKPIAGVALGVACVEVVGALFALCLANSI 73
PGC + + K + G+ +A +++VG FA CL+ SI
Sbjct: 179 -FEPGCIHSVEQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSI 223
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Frame = -1
Query: 600 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXLFTYGESIKES 421
+I IV+GAVM V+A LGCCG S ++ Y+ L + +
Sbjct: 115 YIIIVLGAVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVE 174
Query: 420 IMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINYGQF--TLPESCCVK 256
+ D + + + + LQ F CCGN G ++ F +P SC ++
Sbjct: 175 LSDALNYMVQHYYQGPG--VVQESLDHLQTAFRCCGNAGCSDFRVFRQDIPRSCDIR 229
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 49.2 bits (112), Expect = 3e-06
Identities = 43/175 (24%), Positives = 68/175 (38%)
Frame = -1
Query: 600 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXLFTYGESIKES 421
WI + VGA++F++ F GCCGA ES ++ + T E S
Sbjct: 69 WILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSS 128
Query: 420 IMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINYGQFTLPESCCVKKSILS 241
I + KK S A +Q F+CCG T A ++ + + C + +
Sbjct: 129 IQQ----VLKKSS---ATYELRKNIKPIQNVFQCCGAT-AQTQNRY-IQDGLCGPEPL-- 177
Query: 240 TFAGNNCTVDAANPGCGPKIGELYQKWNKPIAGVALGVACVEVVGALFALCLANS 76
+A C +I + Q W + I VA + +E+ LF+ L S
Sbjct: 178 ----------SAPVNCFDRISHMVQSWGESIVVVAFLLLAIELFAILFSCILCRS 222
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/96 (22%), Positives = 41/96 (42%)
Frame = -1
Query: 600 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXLFTYGESIKES 421
W + GA++ ++ + GC GA + + C + + LF E IK
Sbjct: 58 WFLVGAGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHY 117
Query: 420 IMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG 313
+ + + R +++ A + F +Q +FECCG
Sbjct: 118 VESSMYDTIRNR--YSSETAFKDAFDTVQEKFECCG 151
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 39.9 bits (89), Expect = 0.002
Identities = 44/212 (20%), Positives = 78/212 (36%), Gaps = 30/212 (14%)
Frame = -1
Query: 615 LAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXLFTYGE 436
L ++ +V G ++ FLG CGA+ S +++ + Y +
Sbjct: 23 LKASAYVSLVCGCAQLLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKD 82
Query: 435 ---SIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINY-----GQFT 280
S+KE++ + V + + ++ +LQ +CCG+ G +Y Q T
Sbjct: 83 KVYSVKENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDYISSRWSQST 142
Query: 279 -----------LPESCCVK---KSILSTFAGN--NCTVDAAN------PGCGPKIGELYQ 166
P SCC + S L+ A + C AN GC ++ +
Sbjct: 143 NQDSEEIESPLFPVSCCTQITGASALNPLAKSYARCQQIGANRQWRHAVGCSERLMSWFN 202
Query: 165 KWNKPIAGVALGVACVEVVGALFALCLANSIR 70
+ G G A ++G + CL + IR
Sbjct: 203 EQIWIFVGFGFGSALTMMLGICLSCCLISKIR 234
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/107 (20%), Positives = 44/107 (41%)
Frame = -1
Query: 600 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXLFTYGESIKES 421
W ++VG + F+I F GC G++RE+ + Y+ + + +
Sbjct: 86 WPLLIVGFLTFIIGFSGCVGSLRENTSFLTFYSTLLGLLLIAEFSAGVFAYACRDQLDNY 145
Query: 420 IMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINYGQFT 280
I + + + D D + + +Q + CCG GA ++ + T
Sbjct: 146 IRNLLNDVVVGYRD---DPDLQLLIDSMQETWMCCGINGADDWDRNT 189
>Z92824-4|CAB07307.2| 395|Caenorhabditis elegans B0413.2 protein.
Length = 395
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -1
Query: 600 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYA 502
+I IV+GAVM V+A GCCG S ++ Y+
Sbjct: 226 YIXIVLGAVMMVVAMXGCCGITGRSRPFLIIYS 258
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 36.3 bits (80), Expect = 0.026
Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 22/168 (13%)
Frame = -1
Query: 600 WIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXLFTYGESIKES 421
++ V G ++ V+AFLGCCGA +E ++ Y+ F + +
Sbjct: 84 YLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCYSSCLMLILAIQIAATIYAFLHSHMFEND 143
Query: 420 IMDGVGVLFK--------KRSDANADE-AAEAVFSELQRQFECCG---------NTG--A 301
D + K K S+ D + + ++ + CCG N+G
Sbjct: 144 FRDILHSSLKMYNGTDNMKVSNNPQDGLLVKTAWDKIMIEKSCCGVDSKIGEFNNSGWYQ 203
Query: 300 INYGQFTLPESCCV--KKSILSTFAGNNCTVDAANPGCGPKIGELYQK 163
+N+G++ P +CC + L + T+ + GC KI E +++
Sbjct: 204 LNHGRYQFPPACCPPDEHGRLRPYCN---TIMRHSHGCYAKIAESFEE 248
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.10
Identities = 36/120 (30%), Positives = 43/120 (35%), Gaps = 2/120 (1%)
Frame = +2
Query: 404 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ--*LSRIAPQHPKNAITNIT 577
PTPS M S +P + T T TM T TTM+ + P K+ T T
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPT 212
Query: 578 APTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTXSRPRSATTXLXXNXTYFTKLVPHPM 757
PTTMK T + T TP S P + TT T T P M
Sbjct: 213 TPTTMKSTPTTPTTPTTMKSTPT---TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTM 269
Score = 28.7 bits (61), Expect = 5.1
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +2
Query: 392 LNNTPT-PSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAIT 568
+ +TPT P+ ++ +P T T TM T TTM+ + P K+ T
Sbjct: 357 MKSTPTTPTTPTTMKSTP----TTPTTPTTMKSTPTTPTTPTTMK-STPTTPTTMKSTPT 411
Query: 569 NITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIPTXSRPRSAT 703
T PTTMK PT + T ++++ PT + S T
Sbjct: 412 TPTTPTTMK-STPTTPTTMKSTPTTPSTMKSSPTTPTTMKTSSIT 455
>U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical
protein F01G12.1 protein.
Length = 178
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 325 ELSLQFRENSLGGLVCVSVRSLFE*HADAIHNALLDALAVGEEEDADHHLHN-DDHQQKD 501
+L+L +E SL ++ SVR+ E H + LD + DHH+HN ++H+ +
Sbjct: 53 DLTLNHKEESLYDMLVASVRAGRESHFELDQ---LDVHTETNQSGHDHHIHNNEEHKHHN 109
Query: 502 CVRDDH 519
DH
Sbjct: 110 MRSHDH 115
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/125 (20%), Positives = 44/125 (35%)
Frame = -1
Query: 639 VKDLLKTHLAVGPWIFIVVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXX 460
VK ++T + V WI I +I F+G GA+ S ++ Y
Sbjct: 59 VKSDIRTGIIVSFWIIIGFAIANVIIGFVGVIGAVIRSKYLLAPYFLFMVILFLLEIAIG 118
Query: 459 XXLFTYGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCGNTGAINYGQFT 280
+ S++ ++ + V F A+A S ++ CCG N F
Sbjct: 119 ITVLVKRRSVRRTVKEYVFDSFNMN--------AQADISAFNFRYNCCGAENLPNLNCFA 170
Query: 279 LPESC 265
+C
Sbjct: 171 GQPTC 175
>Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical
protein C54D10.4 protein.
Length = 408
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 351 VFSELQRQFECCGNTGAINYGQF 283
+ +QR++ CCG GAI+YG F
Sbjct: 276 IADRVQRRYCCCGYNGAIDYGFF 298
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/100 (25%), Positives = 43/100 (43%)
Frame = +2
Query: 404 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 583
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 584 TTMKIHGPTARWVFSKSLTMVQFIRNATPIPTXSRPRSAT 703
TT+ T ++S+T + TP+ S P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/100 (25%), Positives = 43/100 (43%)
Frame = +2
Query: 404 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 583
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 584 TTMKIHGPTARWVFSKSLTMVQFIRNATPIPTXSRPRSAT 703
TT+ T ++S+T + TP+ S P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/100 (25%), Positives = 43/100 (43%)
Frame = +2
Query: 404 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 583
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 584 TTMKIHGPTARWVFSKSLTMVQFIRNATPIPTXSRPRSAT 703
TT+ T ++S+T + TP+ S P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 2.9
Identities = 25/100 (25%), Positives = 43/100 (43%)
Frame = +2
Query: 404 PTPSIMLSLMLSP*VKRRTLITTCTMMITSKKIAYVTTMQ*LSRIAPQHPKNAITNITAP 583
PTP+ M + SP K ++TT T IA TT +S + + ++ ++
Sbjct: 353 PTPTAMPGVTRSPACKTTPVLTTTIPFKTCTMIAVSTTTPMIS-LTTESMQSTTSSSEIS 411
Query: 584 TTMKIHGPTARWVFSKSLTMVQFIRNATPIPTXSRPRSAT 703
TT+ T ++S+T + TP+ S P +T
Sbjct: 412 TTLDSSSTTGSVSSTESVTS-DSSDSTTPLDVSSSPSEST 450
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 451 EEDADHHLHNDDHQQKDCVRDDH 519
EE DHH H+ DH + +R +H
Sbjct: 45 EELHDHHEHDHDHHDEQLIRKNH 67
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 28.7 bits (61), Expect = 5.1
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 23/165 (13%)
Frame = -1
Query: 648 WTMVKDLLKTHLA---VGPWIFI-VVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXX 481
+ +KD + L + P I I + G + V++F G GA+R++ ++ +A
Sbjct: 54 YLFIKDFREVKLVDIILNPAILISIFGFSICVVSFFGFMGALRDNIFLLKCFAACVFLSY 113
Query: 480 XXXXXXXXXLFT-YGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG-NT 307
FT + E + +L+ ++ AE + LQ ECCG ++
Sbjct: 114 ILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYHTNRNLAE-IMDALQENLECCGVSS 172
Query: 306 GAINYGQFTL------------PESC-----CVKKSILSTFAGNN 223
A Y + + PE C C +KS++S AG++
Sbjct: 173 IAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCRKSVISEAAGSS 217
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 28.7 bits (61), Expect = 5.1
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 23/165 (13%)
Frame = -1
Query: 648 WTMVKDLLKTHLA---VGPWIFI-VVGAVMFVIAFLGCCGAIRESHCMVVTYAXXXXXXX 481
+ +KD + L + P I I + G + V++F G GA+R++ ++ +A
Sbjct: 78 YLFIKDFREVKLVDIILNPAILISIFGFSICVVSFFGFMGALRDNIFLLKCFAACVFLSY 137
Query: 480 XXXXXXXXXLFT-YGESIKESIMDGVGVLFKKRSDANADEAAEAVFSELQRQFECCG-NT 307
FT + E + +L+ ++ AE + LQ ECCG ++
Sbjct: 138 ILVVAVTLVFFTLFYTDTTEGLSANWLLLYAVKNYHTNRNLAE-IMDALQENLECCGVSS 196
Query: 306 GAINYGQFTL------------PESC-----CVKKSILSTFAGNN 223
A Y + + PE C C +KS++S AG++
Sbjct: 197 IAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCRKSVISEAAGSS 241
>AC087079-1|AAK27872.1| 402|Caenorhabditis elegans Hypothetical
protein Y37E3.1 protein.
Length = 402
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 563 ITNITAPTTMKIHGPTARWVFSKSLTMVQFIRNATPIP 676
I N+T P+ +IH + +W+ + T Q +N P+P
Sbjct: 353 IKNLTIPSDPEIHVDSVKWI--RVATPTQMKKNGVPLP 388
>AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.1 protein.
Length = 487
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 598 DLHSRRGCNVRDRVLGMLWSDTRE-SLHGRHVRNLFAGD 485
D R+ N R +LG W D RE ++ GR F GD
Sbjct: 9 DTFLRKDINTRQIILGSFWRDEREQNVDGRFAVIHFLGD 47
>U97549-5|AAO91739.1| 212|Caenorhabditis elegans Dopamine receptor
protein 1, isoformd protein.
Length = 212
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 74 MELARHSANRAPTTSTQATPR 136
M ++RH + R+ TT+T ATPR
Sbjct: 1 MTVSRHYSRRSTTTTTTATPR 21
>U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine receptor
protein 1, isoforma protein.
Length = 460
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 74 MELARHSANRAPTTSTQATPR 136
M ++RH + R+ TT+T ATPR
Sbjct: 249 MTVSRHYSRRSTTTTTTATPR 269
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -3
Query: 577 CNVRDRVLGMLWSDTRESLHGRHVR--NLFAGDHHCASGDQRPPLHLRREHQGEHYGWRR 404
C V+D V G+L +D +E + G H R L A + +R ++ H+ + R
Sbjct: 219 CRVQD-VSGLLPNDLKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARN 277
Query: 403 RVIQK 389
+ ++K
Sbjct: 278 KALKK 282
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -3
Query: 577 CNVRDRVLGMLWSDTRESLHGRHVR--NLFAGDHHCASGDQRPPLHLRREHQGEHYGWRR 404
C V+D V G+L +D +E + G H R L A + +R ++ H+ + R
Sbjct: 219 CRVQD-VSGLLPNDLKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARN 277
Query: 403 RVIQK 389
+ ++K
Sbjct: 278 KALKK 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,319,526
Number of Sequences: 27780
Number of extensions: 319599
Number of successful extensions: 1174
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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