Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_N24
(801 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1539.06 |||acyl-coenzyme A binding protein |Schizosaccharomy... 71 2e-13
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 58 1e-09
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 48 2e-06
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 46 8e-06
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 45 1e-05
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 42 1e-04
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 39 7e-04
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 37 0.004
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 33 0.036
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 30 0.33
SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101 |Sch... 28 1.8
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 27 4.1
SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma c... 27 4.1
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 4.1
SPCC18.06c |caf1|pop2|CCR4-Not complex subunit Caf1|Schizosaccha... 27 4.1
SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding p... 26 7.2
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 25 9.5
SPAC1610.04 |mug99||meiotically upregulated gene Mug99|Schizosac... 25 9.5
>SPBC1539.06 |||acyl-coenzyme A binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 70.9 bits (166), Expect = 2e-13
Identities = 33/77 (42%), Positives = 47/77 (61%)
Frame = -2
Query: 746 LDSLFNKAADHLXKITNXLDXGQLLELYGLFKQGTEGQCNTPKPGWLDGKGRRKWEAWKN 567
+ S F +AA + ++ + +LL+LY LFKQ T G NT KPG LD KG+ KW AW+
Sbjct: 1 MSSTFEQAAADVKELKETPNSDELLKLYALFKQATVGDNNTEKPGLLDLKGKFKWNAWEE 60
Query: 566 LKDMPSEEAKEKYIALL 516
LK E+A +YI+ +
Sbjct: 61 LKGKSKEDAASEYISFV 77
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 58.4 bits (135), Expect = 1e-09
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = -2
Query: 353 VKELLIKKPELKYEKDEDGLTALHWAADRNAINALSAALSGGCPIDAVDECGQTALHYAV 174
V+ L K PEL +KD G T LH AA I + +S P++ D G T LH+A+
Sbjct: 123 VQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPLHFAL 182
Query: 173 SCGHVESTKILTKAGA-TLLEDDEGNTPLDLATD 75
+ GH + L +AGA TL +D E +T L++ D
Sbjct: 183 AEGHPDVGVELVRAGADTLRKDSENHTALEVCPD 216
Score = 36.7 bits (81), Expect = 0.004
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Frame = -2
Query: 341 LIKKPELKY-EKDEDGLTALHWAADRNAI-NALSAALSGGCPIDAV--DECGQTALHYAV 174
L+K+P +K EKDE G T L + + ++ + + L +D GQT LHYA
Sbjct: 56 LLKQPNIKPDEKDEAGWTPLMISINNRSVPDNVIEELINRSDVDPTITTRGGQTCLHYAA 115
Query: 173 SCGHVESTKILTKAGATLL--EDDEGNTPLDLA 81
G + ++L L+ +D +G TPL A
Sbjct: 116 GKGRLSIVQLLCDKAPELIRKKDLQGQTPLHRA 148
Score = 33.1 bits (72), Expect = 0.047
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = -2
Query: 392 SLLDAAREDCGERVKELLIKK-PELKYEKDEDGLTALHWAADRNAINALSAAL-SGGCPI 219
SL A E+C E E I+ P D+D T LHWA +N + L
Sbjct: 5 SLGKAIEENCPEEYVEQAIQNDPNSLNAVDDDKRTPLHWACSVGKVNTIYFLLKQPNIKP 64
Query: 218 DAVDECGQTALHYAVS 171
D DE G T L +++
Sbjct: 65 DEKDEAGWTPLMISIN 80
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -2
Query: 221 IDAVDECGQTALHYAVSCGHVESTKILTKAGATLLE--DDEGNTPL 90
++AVD+ +T LH+A S G V + L K + D+ G TPL
Sbjct: 30 LNAVDDDKRTPLHWACSVGKVNTIYFLLKQPNIKPDEKDEAGWTPL 75
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 47.6 bits (108), Expect = 2e-06
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = -2
Query: 392 SLLDAAREDCGERVKELLIKKPELKYEKDEDGLTALHWAADRNAINALSAALSGGCPIDA 213
SL AA + + VK L+ + DE G TALHWAA I L G ++A
Sbjct: 3 SLFLAASQGELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVNA 62
Query: 212 VDECGQTA-LHYAVSCGHVESTKILTKAGA-TLLEDDEGNTPLDLA 81
+ Q A +H+A G V++ L + GA LL+D +G L LA
Sbjct: 63 IGGDLQAAPIHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLA 108
Score = 33.1 bits (72), Expect = 0.047
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = -2
Query: 311 KDEDGLTALHWAADRNAINALSAALSGGCPIDAVDECGQTALHYAVSCGHVESTKILTKA 132
+D+ T L WA+ + L G + A DE T LH+++ G+++ K++ K
Sbjct: 130 RDDQQHTPLMWASYHGNEPITNCLLRWGADVLATDEDKMTPLHWSIVGGNLKCMKLILKE 189
Query: 131 G 129
G
Sbjct: 190 G 190
Score = 30.3 bits (65), Expect = 0.33
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -2
Query: 287 LHWAADRNAINALSAALSGGCPIDAVDECGQTALHYAVSCGHVESTKILTKAGATL-LED 111
+HWAA R ++ + + G D+ G LH AV L ++ L D
Sbjct: 72 IHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLAVHAASPLLVVYLLHLDISVDLRD 131
Query: 110 DEGNTPL 90
D+ +TPL
Sbjct: 132 DQQHTPL 138
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 45.6 bits (103), Expect = 8e-06
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = -2
Query: 389 LLDAAREDCGERVKELLIKKPELKYEKDEDGLTALHWAADRNAINALSAALS--GGCPID 216
L+ A R E + E++ K P+ +DE+G + LH A+ I + + I+
Sbjct: 6 LIYACRAADEELLDEIIEKCPQELSRRDENGNSGLHMASANGHIAVVQKIIPYLNKEVIN 65
Query: 215 AVDECGQTALHYAVSCGHVESTKILTKAG 129
A +E G TA+H+A GH E K+L +AG
Sbjct: 66 AQNESGNTAMHWAALNGHAEICKLLLEAG 94
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 45.2 bits (102), Expect = 1e-05
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 278 AADRNAINALSAALSGGCPIDAVDECGQTALHYAVSCGHVESTKILTKAGATL-LEDDEG 102
AA + + L G +A DE G T +H AVS GH + KIL + G + + D +G
Sbjct: 11 AASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDG 70
Query: 101 NTPLDLATDTEI 66
TPL + EI
Sbjct: 71 ETPLFVCEKLEI 82
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = -2
Query: 308 DEDGLTALHWAADRNAINALSAALSGGCPIDAVDECGQTALHYAVSCGHVE-STKILTKA 132
+E G + LH A NA + + GC ++ D G T LHYA H + +L+
Sbjct: 859 NESGRSLLHLTAACGLSNASTFLCNAGCDVNKRDALGYTPLHYASLYDHKDICVNLLSNG 918
Query: 131 GATLLEDDEGNTPLDLATDTEIKKMLEGAD 42
+ G P+DL++ IK + + A+
Sbjct: 919 AKPDVIGASGKKPIDLSSSEPIKLVFKEAN 948
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 39.1 bits (87), Expect = 7e-04
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -2
Query: 308 DEDGLTALHWAADRNAINALSAALSGGCPIDAVDECGQTAL 186
DEDG TALHWAA + + A L G + AV+ QT+L
Sbjct: 234 DEDGHTALHWAAAMGNLEMMHALLQAGANVVAVNYLQQTSL 274
Score = 33.5 bits (73), Expect = 0.036
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -2
Query: 212 VDECGQTALHYAVSCGHVESTKILTKAGATLL 117
+DE G TALH+A + G++E L +AGA ++
Sbjct: 233 IDEDGHTALHWAAAMGNLEMMHALLQAGANVV 264
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 36.7 bits (81), Expect = 0.004
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 212 VDECGQTALHYAVSCGHVESTKILTKAGATL 120
+D+ G T+LH+A S GH+E K+L +A A +
Sbjct: 244 IDDDGHTSLHWACSMGHIEMIKLLLRANADI 274
Score = 32.7 bits (71), Expect = 0.062
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Frame = -2
Query: 419 EPDLVHNELSLLDAAREDCGERVKELLIKKP---ELKYEKDEDGLTALHWAADRNAINAL 249
E L E SLLD R+ L P ++ D+DG T+LHWA I +
Sbjct: 205 EAPLDKYEESLLDFFLHPEEGRIPSFLYSPPPDFQVNSVIDDDGHTSLHWACSMGHIEMI 264
Query: 248 SAALSGGCPIDAVDECGQTALHYAV 174
L I + QT L +V
Sbjct: 265 KLLLRANADIGVCNRLSQTPLMRSV 289
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 33.5 bits (73), Expect = 0.036
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = -2
Query: 317 YEKDEDGLTALHWAADRNAINALSAALSGGCPIDA-VDECGQTALHYAVSCGHVESTKIL 141
Y +D LT++ + +AL A LS +D +DE G ALH+A + + + L
Sbjct: 317 YHTSKDILTSIFLDVNFADSSALEAKLSDSLDLDVPIDELGHAALHWAAAVAKMPLLQAL 376
Query: 140 TKAGATLLEDD-EGNTPL 90
GA L + G T L
Sbjct: 377 IHKGANPLRGNLTGETAL 394
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 30.3 bits (65), Expect = 0.33
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -2
Query: 224 PIDAVDECGQTALHYAVSCGHVESTKILTKAGATLLEDD-EGNTPLDLATDTEIKKMLEG 48
PI+ VD+ + L A CGH K L + GA D +G L A + I++ML
Sbjct: 78 PINQVDQFDYSPLVLASLCGHEPVVKFLLENGALCERDTFQGERCLYGALNDNIRRMLLS 137
Query: 47 AD 42
D
Sbjct: 138 YD 139
>SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 261
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 10/59 (16%)
Frame = -2
Query: 566 LKDMPSEEAKEKYIALLKKYDPDWS----GTPQKT------NIDTKETWVAVSSMRYSP 420
L+D ++ +E+ +++K +DPD G P KT + DTKE+ + RY P
Sbjct: 67 LRDEKQKQQRERLRSMIKVWDPDHDRHVIGDPYKTMFLSRLSYDTKESDIEREFTRYGP 125
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -2
Query: 521 LLKKYDPDWSGTPQKTNIDT-KETWVAVSSMRYSPEPDLVHNE 396
++++YDPD++G K +I E V ++R +PE L+ NE
Sbjct: 10 IVRQYDPDYTG---KVSIQAFLEIVDDVDALRLNPEAPLLDNE 49
>SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma
catalytic subunit|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1018
Score = 26.6 bits (56), Expect = 4.1
Identities = 24/105 (22%), Positives = 47/105 (44%)
Frame = -2
Query: 644 TEGQCNTPKPGWLDGKGRRKWEAWKNLKDMPSEEAKEKYIALLKKYDPDWSGTPQKTNID 465
T G C+ KP W K R+ + ++ +E +++ + +D D+ N
Sbjct: 256 THGMCSRQKPTWF--KARKAY-----IRSQSTETSEDDDSS---SFDDDYQ------NYL 299
Query: 464 TKETWVAVSSMRYSPEPDLVHNELSLLDAAREDCGERVKELLIKK 330
+E W+A SS+ + H ++L + R+D KE +++K
Sbjct: 300 KQEPWLAHSSVNSLKDVAKFHCNITLDKSKRDDFASLEKEPILQK 344
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -2
Query: 584 WEAWKNL---KDMPSEEAKEKYIALLKKYDPDWSGTPQKTNIDTK 459
WE + L KD S++ KE Y L + + PD QK + K
Sbjct: 7 WELYLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEK 51
>SPCC18.06c |caf1|pop2|CCR4-Not complex subunit
Caf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 332
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 185 HYAVSCGHVESTKILTKAGATLLEDDEGNTPLDLAT 78
HY +V+S KI+ A L D+EGN P++ T
Sbjct: 71 HYQTLRANVDSLKIIQIGLA--LSDEEGNAPVEACT 104
>SPBC29A10.02 |spo5|mrb1, mug12, SPBC365.18|meiotic RNA-binding
protein 1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 567
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 476 SFEVYLTSQDHIFSTKQYISP*PLHW 553
SF L S ST YIS PLHW
Sbjct: 370 SFSARLQSLQDTESTNLYISNLPLHW 395
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = -2
Query: 575 WKNLKDMPSEEAKEKYIALLKKYDPDWSGTPQKTNIDTKETWVAVSSMRYSPEPDLVHNE 396
WK+ D S+E +++ L K+ D P+ ++ K+T ++ Y D NE
Sbjct: 369 WKDYLDNNSKEILDQFGFLQKRPSHDTPLCPEDIKLNQKQT-LSFYESNYGLVDDFFGNE 427
Query: 395 LSLLD 381
L L+
Sbjct: 428 LDGLN 432
>SPAC1610.04 |mug99||meiotically upregulated gene
Mug99|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = -2
Query: 395 LSLLDAARED--CGERVKELLIKKP------ELKYEKDEDGLTALHWAADRNAINALSAA 240
L L ++ ED C +++ L+ P ELKY D +GL L+ + NA+ +A
Sbjct: 74 LQALSSSAEDVACVKQITHALLAAPFMPESKELKYAMDHNGLNPLYISFGTNALFERNAR 133
Query: 239 LS 234
S
Sbjct: 134 YS 135
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,112,922
Number of Sequences: 5004
Number of extensions: 64119
Number of successful extensions: 221
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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