Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_N17
         (435 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   0.88 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   4.7  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    23   4.7  
AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative odorant-b...    23   6.2  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    22   8.2  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    22   8.2  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.4 bits (53), Expect = 0.88
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +3

Query: 330 HRHE-QHSESTENNGLHIGTKLMNS 401
           H+H+ QH     +NG H G  LM+S
Sbjct: 653 HQHQGQHHAQHHSNGTHHGPSLMSS 677


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 254 SHACRPSCAQHQPSPASGPACRDGTTPP 337
           S + +PS    +PSP S    R G  PP
Sbjct: 401 SKSLQPSTLPTRPSPKSSRKRRTGHRPP 428


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +1

Query: 103 PSDPGHWPWLI 135
           P+D   WPW++
Sbjct: 208 PADSNEWPWMV 218


>AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative
           odorant-binding protein OBPjj4 protein.
          Length = 204

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -2

Query: 365 IFCAFAVLFVAVSCRPDKLDLKQVKADAERKKACMHDCTKANLDPICA 222
           + CAF V+FV V+       L+ V A   +     H+ T   +D  CA
Sbjct: 4   VVCAFGVIFVVVT-------LELVVAHPGKDVLGCHNGTSITVDECCA 44


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
 Frame = +1

Query: 58  NVINYCFFSVQERRMPS--DPGHWPW 129
           N + YC FS Q  RM     P  W W
Sbjct: 506 NPLIYCLFSTQVCRMIKRLPPFRWLW 531


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 290 PSPASGPACRDGTTPPRTTQRKHRK 364
           PSP +GP   +G+   R  ++  +K
Sbjct: 85  PSPRNGPNINEGSINKRKKKKSKKK 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,121
Number of Sequences: 2352
Number of extensions: 9113
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)