Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_N17
(435 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 36 0.017
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 36 0.017
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 30 0.63
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 30 0.63
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 30 0.63
U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of s... 30 0.83
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 29 1.5
AC024765-8|AAF60530.1| 165|Caenorhabditis elegans Hypothetical ... 28 2.5
Z79758-7|CAD98730.1| 763|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z79758-6|CAD98729.1| 673|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z79758-4|CAB02133.2| 790|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z79758-3|CAB02134.1| 689|Caenorhabditis elegans Hypothetical pr... 27 5.9
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 27 7.8
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 27 7.8
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 35.5 bits (78), Expect = 0.017
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -2
Query: 296 VKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 117
VK D + C + C + P+CA GE +F NEC M +CE K ++ QG C
Sbjct: 383 VKPDRTAECECPNRCEDV-MRPVCA-TNGE---TFDNECEMKKKSCETKSMIKVKHQGTC 437
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 35.5 bits (78), Expect = 0.017
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -2
Query: 296 VKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 117
VK D + C + C + P+CA GE +F NEC M +CE K ++ QG C
Sbjct: 391 VKPDRTAECECPNRCEDV-MRPVCA-TNGE---TFDNECEMKKKSCETKSMIKVKHQGTC 445
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 30.3 bits (65), Expect = 0.63
Identities = 19/68 (27%), Positives = 26/68 (38%)
Frame = -2
Query: 359 CAFAVLFVAVSCRPDKLDLKQVKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNEC 180
C FA F + + L L ++ K C H+CT DP+C + N C
Sbjct: 85 CHFAQ-FQCIMKKSMGLSLTKLHMGRCSSKDCNHNCTNTEFDPVC----DTNGSVYRNLC 139
Query: 179 VMNNYNCE 156
V CE
Sbjct: 140 VFQMRRCE 147
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.3 bits (65), Expect = 0.63
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 221 GKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDGIRLS 90
G TG K + NEC+ NN CEH + + I C G LS
Sbjct: 107 GFTGAKCQYDANECMANNGGCEH-ECVNTIGTYYCRCWPGFELS 149
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.3 bits (65), Expect = 0.63
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 221 GKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQCPGSDGIRLS 90
G TG K + NEC+ NN CEH + + I C G LS
Sbjct: 107 GFTGAKCQYDANECMANNGGCEH-ECVNTIGTYYCRCWPGFELS 149
>U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of
serine protease likeprotein protein 2, isoform a
protein.
Length = 135
Score = 29.9 bits (64), Expect = 0.83
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -2
Query: 296 VKADAERKKACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHKDTLRKISQGQC 117
+ A A K C + + C + G PK+ +C+MN C+ KD + S G+C
Sbjct: 10 IVAVATATKTCEANEELVSCHNTCEPQCGYTPKACTEQCIMN--TCDCKDGFVRNSLGKC 67
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 251 CSHACRPSCAQHQPSPASGPAC 316
C AC PSC Q +PA P C
Sbjct: 178 CMPACLPSCVQSSCAPACQPMC 199
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 251 CSHACRPSCAQHQPSPASGPAC 316
C +C+PSC Q +PA P C
Sbjct: 225 CMPSCQPSCVQQACAPACQPMC 246
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 251 CSHACRPSCAQHQPSPASGPAC 316
C AC+ SC Q +PA P C
Sbjct: 272 CMPACQSSCVQQACAPACQPKC 293
>AC024765-8|AAF60530.1| 165|Caenorhabditis elegans Hypothetical
protein Y39A3CR.8 protein.
Length = 165
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -2
Query: 413 KLVHRIHQFRSNMKTIIFCAFAVLFVAVSCRPDKL---DLKQVKADAERKK 270
K + +H+F N+K + + FV+VS DK D+K++ DA++KK
Sbjct: 24 KSIIHLHRFSKNLKNKL----PIYFVSVSKGGDKKKKKDIKKIDKDADKKK 70
>Z79758-7|CAD98730.1| 763|Caenorhabditis elegans Hypothetical
protein W10D5.3f protein.
Length = 763
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 147 YVAQDQPRPVSWIRWHPSLLNTEETIINHVVYSRY*Q 37
Y Q +P S +R HP +L + NH+V Y Q
Sbjct: 93 YEMQKRPATTSQVRSHPYVLPSRSGASNHLVNHHYQQ 129
>Z79758-6|CAD98729.1| 673|Caenorhabditis elegans Hypothetical
protein W10D5.3e protein.
Length = 673
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 147 YVAQDQPRPVSWIRWHPSLLNTEETIINHVVYSRY*Q 37
Y Q +P S +R HP +L + NH+V Y Q
Sbjct: 93 YEMQKRPATTSQVRSHPYVLPSRSGASNHLVNHHYQQ 129
>Z79758-4|CAB02133.2| 790|Caenorhabditis elegans Hypothetical
protein W10D5.3c protein.
Length = 790
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 147 YVAQDQPRPVSWIRWHPSLLNTEETIINHVVYSRY*Q 37
Y Q +P S +R HP +L + NH+V Y Q
Sbjct: 93 YEMQKRPATTSQVRSHPYVLPSRSGASNHLVNHHYQQ 129
>Z79758-3|CAB02134.1| 689|Caenorhabditis elegans Hypothetical
protein W10D5.3a protein.
Length = 689
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 147 YVAQDQPRPVSWIRWHPSLLNTEETIINHVVYSRY*Q 37
Y Q +P S +R HP +L + NH+V Y Q
Sbjct: 93 YEMQKRPATTSQVRSHPYVLPSRSGASNHLVNHHYQQ 129
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 27.1 bits (57), Expect = 5.9
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -2
Query: 326 CRPDKLDLKQVKADAERKK-ACMHDCTKANLDPICAGKTGEKPKSFGNECVMNNYNCEHK 150
C KL + D+ ++K +C C +P+C +K ++ N C N C HK
Sbjct: 100 CIEFKLFKNHISMDSSQEKCSCTAPCP-TEWNPVC----DKKGQTHANFCTFLNSKCYHK 154
Query: 149 DTLRK 135
+ L +
Sbjct: 155 NQLNE 159
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 224 AGKTGEKPKSFGN-ECVMNNYNCEHKDTLR-KISQGQCP 114
AG+ K+ GN ECV N+Y C+ + R + + CP
Sbjct: 146 AGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDEANCP 184
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 224 AGKTGEKPKSFGN-ECVMNNYNCEHKDTLR-KISQGQCP 114
AG+ K+ GN ECV N+Y C+ + R + + CP
Sbjct: 146 AGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDEANCP 184
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 224 AGKTGEKPKSFGN-ECVMNNYNCEHKDTLR-KISQGQCP 114
AG+ K+ GN ECV N+Y C+ + R + + CP
Sbjct: 146 AGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDEANCP 184
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 224 AGKTGEKPKSFGN-ECVMNNYNCEHKDTLR-KISQGQCP 114
AG+ K+ GN ECV N+Y C+ + R + + CP
Sbjct: 146 AGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDEANCP 184
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 224 AGKTGEKPKSFGN-ECVMNNYNCEHKDTLR-KISQGQCP 114
AG+ K+ GN ECV N+Y C+ + R + + CP
Sbjct: 146 AGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDEANCP 184
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 224 AGKTGEKPKSFGN-ECVMNNYNCEHKDTLR-KISQGQCP 114
AG+ K+ GN ECV N+Y C+ + R + + CP
Sbjct: 146 AGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDEANCP 184
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 224 AGKTGEKPKSFGN-ECVMNNYNCEHKDTLR-KISQGQCP 114
AG+ K+ GN ECV N+Y C+ + R + + CP
Sbjct: 146 AGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDEANCP 184
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 224 AGKTGEKPKSFGN-ECVMNNYNCEHKDTLR-KISQGQCP 114
AG+ K+ GN ECV N+Y C+ + R + + CP
Sbjct: 146 AGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDEANCP 184
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 224 AGKTGEKPKSFGN-ECVMNNYNCEHKDTLR-KISQGQCP 114
AG+ K+ GN ECV N+Y C+ + R + + CP
Sbjct: 146 AGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDEANCP 184
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 224 AGKTGEKPKSFGN-ECVMNNYNCEHKDTLR-KISQGQCP 114
AG+ K+ GN ECV N+Y C+ + R + + CP
Sbjct: 146 AGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDEANCP 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,172,212
Number of Sequences: 27780
Number of extensions: 210237
Number of successful extensions: 704
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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