Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_N16
         (709 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053560-1|AAH53560.1|  292|Homo sapiens BCDIN3 domain containin...    86   1e-16
BC018935-1|AAH18935.2|  689|Homo sapiens bin3, bicoid-interactin...    38   0.027
BC016396-1|AAH16396.1|  220|Homo sapiens BCDIN3 protein protein.       38   0.027
BC000556-1|AAH00556.2|  689|Homo sapiens bin3, bicoid-interactin...    38   0.027
AK000264-1|BAA91040.1|  220|Homo sapiens protein ( Homo sapiens ...    38   0.027
AF264752-1|AAF74767.1|  220|Homo sapiens unknown protein.              38   0.027

>BC053560-1|AAH53560.1|  292|Homo sapiens BCDIN3 domain containing
           protein.
          Length = 292

 Score = 85.8 bits (203), Expect = 1e-16
 Identities = 39/98 (39%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
 Frame = -3

Query: 641 VSMWIHLNNGDNGLREFLEHIKTISKSIIIEPQPWKCYRQAQKRIKKTG-NTFQLYDNLK 465
           ++MWIHLN+GD+GL EFL H+ ++   +++EPQPWKCYR A +R++K G + F  + +L 
Sbjct: 166 ITMWIHLNHGDHGLWEFLAHLSSLCHYLLVEPQPWKCYRAAARRLRKLGLHDFDHFHSLA 225

Query: 464 IRSQVDIFIESIL-KEHTHIKVYESQNSSWNRKIQSYK 354
           IR  +   I  IL ++H    +    N+SW+R +  ++
Sbjct: 226 IRGDMPNQIVQILTQDHGMELICCFGNTSWDRSLLLFR 263


>BC018935-1|AAH18935.2|  689|Homo sapiens bin3, bicoid-interacting
           3, homolog (Drosophila) protein.
          Length = 689

 Score = 38.3 bits (85), Expect = 0.027
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = -3

Query: 641 VSMWIHLNNGDNGLREFLEHIKTISKS---IIIEPQPWKCYRQAQKRIKKTGNTFQLYDN 471
           ++ W+HLN GD GL+     I    +    +++EPQPW  Y    KR   T   ++ Y  
Sbjct: 583 LTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSY---GKRKTLTETIYKNYYR 639

Query: 470 LKIRSQ 453
           ++++ +
Sbjct: 640 IQLKPE 645


>BC016396-1|AAH16396.1|  220|Homo sapiens BCDIN3 protein protein.
          Length = 220

 Score = 38.3 bits (85), Expect = 0.027
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = -3

Query: 641 VSMWIHLNNGDNGLREFLEHIKTISKS---IIIEPQPWKCYRQAQKRIKKTGNTFQLYDN 471
           ++ W+HLN GD GL+     I    +    +++EPQPW  Y    KR   T   ++ Y  
Sbjct: 114 LTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSY---GKRKTLTETIYKNYYR 170

Query: 470 LKIRSQ 453
           ++++ +
Sbjct: 171 IQLKPE 176


>BC000556-1|AAH00556.2|  689|Homo sapiens bin3, bicoid-interacting
           3, homolog (Drosophila) protein.
          Length = 689

 Score = 38.3 bits (85), Expect = 0.027
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = -3

Query: 641 VSMWIHLNNGDNGLREFLEHIKTISKS---IIIEPQPWKCYRQAQKRIKKTGNTFQLYDN 471
           ++ W+HLN GD GL+     I    +    +++EPQPW  Y    KR   T   ++ Y  
Sbjct: 583 LTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSY---GKRKTLTETIYKNYYR 639

Query: 470 LKIRSQ 453
           ++++ +
Sbjct: 640 IQLKPE 645


>AK000264-1|BAA91040.1|  220|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20257 fis, clone COLF7231. ).
          Length = 220

 Score = 38.3 bits (85), Expect = 0.027
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = -3

Query: 641 VSMWIHLNNGDNGLREFLEHIKTISKS---IIIEPQPWKCYRQAQKRIKKTGNTFQLYDN 471
           ++ W+HLN GD GL+     I    +    +++EPQPW  Y    KR   T   ++ Y  
Sbjct: 114 LTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSY---GKRKTLTETIYKNYYR 170

Query: 470 LKIRSQ 453
           ++++ +
Sbjct: 171 IQLKPE 176


>AF264752-1|AAF74767.1|  220|Homo sapiens unknown protein.
          Length = 220

 Score = 38.3 bits (85), Expect = 0.027
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
 Frame = -3

Query: 641 VSMWIHLNNGDNGLREFLEHIKTISKS---IIIEPQPWKCYRQAQKRIKKTGNTFQLYDN 471
           ++ W+HLN GD GL+     I    +    +++EPQPW  Y    KR   T   ++ Y  
Sbjct: 114 LTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSY---GKRKTLTETIYKNYYR 170

Query: 470 LKIRSQ 453
           ++++ +
Sbjct: 171 IQLKPE 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,045,399
Number of Sequences: 237096
Number of extensions: 1723363
Number of successful extensions: 6927
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6922
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)