Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_N13
         (754 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   5.4  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   7.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.4  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   9.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.4  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 545 MMALSFYTNHMSLFWDPD 492
           M +LS  T+ M   WDPD
Sbjct: 181 MESLSHTTDEMIFQWDPD 198


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/43 (23%), Positives = 19/43 (44%)
 Frame = -3

Query: 401 EMEREILKQFIKSKYDDLRELNDAANETAIATAVNVYVEKMEK 273
           E E+E+L   +      +R   + A +      VN++V  + K
Sbjct: 30  EKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISK 72


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 534 QRHHELFPIFTS 569
           Q HH L+P F+S
Sbjct: 66  QAHHRLYPAFSS 77


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/50 (22%), Positives = 24/50 (48%)
 Frame = -3

Query: 413 ELPDEMEREILKQFIKSKYDDLRELNDAANETAIATAVNVYVEKMEKATE 264
           E+ + +    L + I  ++ D  E +  + + A+ +  N Y  K+E+  E
Sbjct: 513 EILNSLSATKLSKIILMQFGDKLESSHDSFQAALRSIENYYSGKLERTEE 562


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/50 (22%), Positives = 24/50 (48%)
 Frame = -3

Query: 413 ELPDEMEREILKQFIKSKYDDLRELNDAANETAIATAVNVYVEKMEKATE 264
           E+ + +    L + I  ++ D  E +  + + A+ +  N Y  K+E+  E
Sbjct: 551 EILNSLSATKLSKIILMQFGDKLESSHDSFQAALRSIENYYSGKLERTEE 600


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 427 NYFTPNCQMRWREKYLNSSSSR 362
           N F  NC M W     N +S+R
Sbjct: 680 NPFNCNCSMDWLPGINNQTSTR 701


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
          protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 34 HYSEAGSQEDL 66
          HY  AGSQ+D+
Sbjct: 65 HYGAAGSQQDM 75


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 403  MRWREKYLNSSSSRSM 356
            +RWR +YL     R M
Sbjct: 1633 LRWRSRYLGDRMQRPM 1648


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 403  MRWREKYLNSSSSRSM 356
            +RWR +YL     R M
Sbjct: 1629 LRWRSRYLGDRMQRPM 1644


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,593
Number of Sequences: 438
Number of extensions: 3683
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)