Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_N09
(319 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.04c |rpl4301|rpl43-1, rpl43, rpl37a-1|60S ribosomal prot... 96 1e-21
SPBC83.02c |rpl4302|rpl43-2, rpl43, rpl37a-2|60S ribosomal prote... 94 4e-21
SPBC4F6.05c |||lectin |Schizosaccharomyces pombe|chr 2|||Manual 30 0.097
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 26 1.2
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 26 1.6
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 26 1.6
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 25 2.1
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 25 3.7
SPBC29A3.05 |||chromatin remodeling complex subunit|Schizosaccha... 25 3.7
SPCC1223.11 |ptc2||protein phosphatase 2C Ptc2 |Schizosaccharomy... 24 4.8
SPBC29A10.14 |rec8||meiotic cohesin complex subunit Rec8|Schizos... 24 4.8
SPAC24B11.06c |sty1|spc1, phh1|MAP kinase Sty1|Schizosaccharomyc... 24 4.8
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 24 4.8
SPAC2G11.07c |ptc3||protein phosphatase 2C Ptc3|Schizosaccharomy... 24 6.4
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 24 6.4
SPBC2D10.03c |||DUF866 domain protein|Schizosaccharomyces pombe|... 23 8.5
SPBC1773.16c |||transcription factor |Schizosaccharomyces pombe|... 23 8.5
SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces ... 23 8.5
>SPBC800.04c |rpl4301|rpl43-1, rpl43, rpl37a-1|60S ribosomal protein
L37a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 94
Score = 95.9 bits (228), Expect = 1e-21
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
Frame = -1
Query: 268 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSC--K 95
M KRTKKVG+TGKYG RYGASLR+ V+K+EV QH++Y C FCG++ +KR+ GIW C K
Sbjct: 1 MTKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRNTVKRTAAGIWCCNGK 60
Query: 94 RCKRTV 77
CK+ +
Sbjct: 61 GCKKVL 66
Score = 27.9 bits (59), Expect = 0.39
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 72 GGAWVFSTTAASSCRSAVQEV 10
GGAW +T AA+S RS ++ +
Sbjct: 68 GGAWTVTTAAATSARSTIRRL 88
>SPBC83.02c |rpl4302|rpl43-2, rpl43, rpl37a-2|60S ribosomal protein
L37a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 94
Score = 94.3 bits (224), Expect = 4e-21
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 2/66 (3%)
Frame = -1
Query: 268 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSC--K 95
M KRTKKVG+TGKYG RYGASLR+ V+K+EV QH++Y C FCG+ +KR+ GIW C K
Sbjct: 1 MTKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAGIWKCSGK 60
Query: 94 RCKRTV 77
C +T+
Sbjct: 61 GCSKTL 66
Score = 27.9 bits (59), Expect = 0.39
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 72 GGAWVFSTTAASSCRSAVQEV 10
GGAW +T AA+S RS ++ +
Sbjct: 68 GGAWTVTTAAATSARSTIRRL 88
>SPBC4F6.05c |||lectin |Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 29.9 bits (64), Expect = 0.097
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 69 LLSTVLLHRLQDQMPTQERFIASLPQNEQVYFACWVTS 182
L ST +L ++ Q+ T F+A + +NE +FA W TS
Sbjct: 67 LWSTSVLRQVGWQLSTS--FVAHVSENENTFFAIWYTS 102
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 26.2 bits (55), Expect = 1.2
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 172 QHAKYT-CSFCGKDAMKRSCVGIWSCKRCKR 83
+H K T C C + +K C +W C+ CK+
Sbjct: 15 RHRKITSCRECHR--LKLKCDRVWPCENCKK 43
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 25.8 bits (54), Expect = 1.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 185 LFDHFT*RGTVTCAIFASNSNLFGT 259
+FD FT +T I ASN N FG+
Sbjct: 550 VFDEFTNISNLTSPIEASNGNTFGS 574
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 25.8 bits (54), Expect = 1.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 220 VCHICQ*FQPFWYVWPF 270
+ ++ Q FQ WY WPF
Sbjct: 1251 IVYLVQDFQRLWYHWPF 1267
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 25.4 bits (53), Expect = 2.1
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 51 WRIPKLLLST---VLLHRLQDQMPTQERFIASLPQNEQV 158
+R+ KL+ +L +L +Q+PT R AS+P QV
Sbjct: 19 YRLQKLVTEDDFILLKQKLTEQLPTTFRITASIPHATQV 57
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 24.6 bits (51), Expect = 3.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 183 IFLTILRREAP*RVPYLPVIPTFLVRLAILVNL 281
I L I + P Y+P++P L RL L N+
Sbjct: 253 IMLEICSSQLPFVEQYMPILPLLLERLKSLQNM 285
>SPBC29A3.05 |||chromatin remodeling complex
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 139
Score = 24.6 bits (51), Expect = 3.7
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -1
Query: 163 KYTCSFCGKDAMKRSCVGIWSCKRCKR 83
KY C CG + C I S RC +
Sbjct: 110 KYACQNCGTSYCSKGCEVIHSETRCMK 136
>SPCC1223.11 |ptc2||protein phosphatase 2C Ptc2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 370
Score = 24.2 bits (50), Expect = 4.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 121 SCVGIWSCKRCKRTVDRRSLGIL 53
+C GIW CK ++ V+ GI+
Sbjct: 231 ACDGIWDCKSSQQVVEFVRRGIV 253
>SPBC29A10.14 |rec8||meiotic cohesin complex subunit
Rec8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 561
Score = 24.2 bits (50), Expect = 4.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 288 YRRGLPKWPNVPKRLELL 235
YR+ LP P++P R+E L
Sbjct: 427 YRKRLPHSPSMPSRVEFL 444
>SPAC24B11.06c |sty1|spc1, phh1|MAP kinase Sty1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 349
Score = 24.2 bits (50), Expect = 4.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 123 RFIASLPQNEQVYFA 167
RF+ SLPQ E+V FA
Sbjct: 248 RFVQSLPQKEKVPFA 262
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 24.2 bits (50), Expect = 4.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 97 KRCKRTVDRRSLGILHYCCLI 35
K+ RTVD SLG + Y CL+
Sbjct: 372 KKYDRTVDYWSLGCICYECLV 392
>SPAC2G11.07c |ptc3||protein phosphatase 2C Ptc3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 414
Score = 23.8 bits (49), Expect = 6.4
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 121 SCVGIWSCKRCKRTVDRRSLGIL 53
+C GIW CK ++ ++ GI+
Sbjct: 228 ACDGIWDCKTSQQVIEFVRRGIV 250
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 23.8 bits (49), Expect = 6.4
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -3
Query: 281 EVYQNGQTYQKGWNYWQIWHTLRCLST*NGQKDGSNPTRKVYLL 150
EV ++GQ Y + W + T ++T + +P R VYL+
Sbjct: 178 EVIRDGQEYNVMADIWSLGITAYEIATGSPPHAKEDPFRAVYLI 221
>SPBC2D10.03c |||DUF866 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 157
Score = 23.4 bits (48), Expect = 8.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -1
Query: 109 IWSCKRCKRT 80
IW+CK C++T
Sbjct: 65 IWTCKNCRKT 74
>SPBC1773.16c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 595
Score = 23.4 bits (48), Expect = 8.5
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 32 HDE-AAVVENTQAPPVYSPLAS 94
HD AAV EN + P +Y+PL++
Sbjct: 42 HDNRAAVQENERYPILYTPLST 63
>SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 607
Score = 23.4 bits (48), Expect = 8.5
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 120 ERFIASLPQNEQVYFA 167
ERF ++PQ++QV FA
Sbjct: 273 ERFAVAVPQSKQVSFA 288
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,389,319
Number of Sequences: 5004
Number of extensions: 28403
Number of successful extensions: 90
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 85983492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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