Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_N09
(319 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0070 + 27479654-27479672,27479864-27479922,27480339-274803... 105 8e-24
01_06_0260 - 27959188-27959251,27959342-27959424,27960220-279603... 104 2e-23
06_02_0173 - 12601025-12601071,12601632-12601698,12601857-126019... 28 1.8
12_02_0648 + 21490202-21490296,21490547-21490634,21491216-214912... 27 2.4
09_06_0303 - 22149214-22149474,22150099-22150236,22150856-221511... 27 2.4
09_06_0184 - 21413275-21414267 27 3.2
12_02_1175 + 26702744-26704507 27 4.2
11_03_0222 + 11880333-11880551,11880667-11880736,11880839-118809... 27 4.2
07_01_1207 + 11511754-11513865 27 4.2
06_02_0240 + 13397512-13397856 27 4.2
03_05_0893 + 28566436-28566501,28566624-28566903,28567002-285671... 27 4.2
02_03_0063 + 14600318-14600322,14600936-14601011,14601615-14601776 27 4.2
11_03_0158 + 10911997-10912078,10912203-10912288,10913780-109138... 26 5.6
02_01_0679 - 5048653-5051394 26 5.6
01_05_0216 + 19386132-19386314,19386794-19388092,19388440-19388667 26 5.6
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 26 7.4
04_04_0864 - 28852252-28854582 26 7.4
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 25 9.7
09_02_0112 - 4396756-4397406,4397514-4397717 25 9.7
07_01_1149 + 10789733-10791209,10791326-10791588,10791745-107919... 25 9.7
03_05_0487 + 24838620-24838967,24840526-24840747,24840819-248411... 25 9.7
02_05_1152 + 34494423-34494586,34494725-34494781,34494851-344949... 25 9.7
>05_07_0070 +
27479654-27479672,27479864-27479922,27480339-27480378,
27480477-27480565,27481065-27481147,27481219-27481282
Length = 117
Score = 105 bits (252), Expect = 8e-24
Identities = 44/61 (72%), Positives = 50/61 (81%)
Frame = -1
Query: 271 KMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKR 92
++ KRTKK GI GKYGTRYGASLRK +KKMEV+QH+KY C FCGK A+KR VGIW CK
Sbjct: 25 ELTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKD 84
Query: 91 C 89
C
Sbjct: 85 C 85
>01_06_0260 -
27959188-27959251,27959342-27959424,27960220-27960308,
27960388-27960427,27960938-27960981,27961240-27961288
Length = 122
Score = 104 bits (249), Expect = 2e-23
Identities = 44/58 (75%), Positives = 48/58 (82%)
Frame = -1
Query: 262 KRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 89
KRTKK GI GKYGTRYGASLRK +KKMEV+QH+KY C FCGK A+KR VGIW CK C
Sbjct: 33 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDC 90
>06_02_0173 -
12601025-12601071,12601632-12601698,12601857-12601934,
12602235-12602396,12603309-12603440,12604604-12604656,
12605808-12606372
Length = 367
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 32 HDEAAVVENTQAPPVYSPLASLTRPDADTR 121
HD AV ++T PPVY A++ P R
Sbjct: 44 HDGIAVYKHTPPPPVYQTPAAVAAPSPPVR 73
>12_02_0648 +
21490202-21490296,21490547-21490634,21491216-21491260,
21491355-21491387,21491480-21491557,21491647-21491690,
21491765-21491805,21492102-21492184,21492261-21492352,
21492468-21492537,21492838-21492876,21493670-21493687,
21494586-21494713,21495235-21495358,21495585-21495716,
21496092-21496223,21496582-21496665
Length = 441
Score = 27.5 bits (58), Expect = 2.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 181 EVTQHAKYTCSFCGKDAM 128
E+ +H KYTC C K A+
Sbjct: 194 EMVEHNKYTCPICSKTAL 211
>09_06_0303 -
22149214-22149474,22150099-22150236,22150856-22151100,
22151344-22151809
Length = 369
Score = 27.5 bits (58), Expect = 2.4
Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Frame = -1
Query: 298 STFVSERFTKMAKRTKKVG-ITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKR 122
S + RF ++V K G Y L K AKYT G A R
Sbjct: 60 SDMMKSRFEAFKANARQVNEFNKKEGMSYTLGLNKFSDMSYEEFAAKYTGGMPGSIADDR 119
Query: 121 SCVGIWSCKRCKRTV 77
S G SCK ++ V
Sbjct: 120 SSAGAVSCKLREKNV 134
>09_06_0184 - 21413275-21414267
Length = 330
Score = 27.1 bits (57), Expect = 3.2
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 5 HVTSXTADLHDEAAVVENTQAPPVYSPLASLTRPDADTRTFHSILTTK*ASILCVLGYFH 184
H ++ +++HDE V+ + PPV SP+ P A R I S+LC + F
Sbjct: 178 HESADGSEIHDEHHVIITGEEPPV-SPVPR-EPPVAHVRNRRPI------SLLCAVPMFF 229
Query: 185 LFD--HFT*RGT 214
L+ HFT G+
Sbjct: 230 LYGAYHFTIGGS 241
>12_02_1175 + 26702744-26704507
Length = 587
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 20 TADLHDEAAVVENTQAPPVYSPLASLTRPDADTRTF 127
T+DL VV++ A P P++S ++P + RTF
Sbjct: 296 TSDLAAPLLVVDDDDASPPPLPVSSSSKPTSAPRTF 331
>11_03_0222 +
11880333-11880551,11880667-11880736,11880839-11880944,
11881490-11881556,11881597-11881692
Length = 185
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 2 LHVTSXTADLHDEAAVVENTQAPPVYSPLASLTRP 106
L V S + + DE ++ PP+ SPL RP
Sbjct: 81 LEVMSPSGEAPDEGSIAVEFHMPPICSPLVRPGRP 115
>07_01_1207 + 11511754-11513865
Length = 703
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 41 AAVVENTQAPPVYSPLASLTRPDADTRTFHSILTT 145
AAV+ PP P + T PD D + HS+L +
Sbjct: 6 AAVLLPRPPPPPPPPAGAPTEPDDDEGSLHSLLAS 40
>06_02_0240 + 13397512-13397856
Length = 114
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = -1
Query: 214 GASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRCKRTVDRRS 65
G++ + ++EV K G + R + S +RC RTV+ R+
Sbjct: 3 GSAFKAFKSRVEVAWSPKLVRGLPGTRRLHRHTLEAMSLRRCHRTVEHRT 52
>03_05_0893 +
28566436-28566501,28566624-28566903,28567002-28567188,
28567353-28567423,28567523-28567600,28567687-28567774,
28567875-28567930,28568054-28568121
Length = 297
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -1
Query: 154 CSFCGKDAMKRSCVGIWSCKRCKRTVDRRSLGILHYCCL 38
C CG+ + + C+G C C S GIL CL
Sbjct: 188 CKRCGEGDLNQPCIGKTDCSSC-----HSSYGILCRACL 221
>02_03_0063 + 14600318-14600322,14600936-14601011,14601615-14601776
Length = 80
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = -1
Query: 307 FSLSTFVSERFTKMAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAK 161
+ L ++ + + K + G+T + +RY LR+ ++K+EV K
Sbjct: 11 YELEVYMLTIYLLLHKNQVRHGVTARRTSRYYVVLRRELRKLEVVGKVK 59
>11_03_0158 +
10911997-10912078,10912203-10912288,10913780-10913857,
10913967-10914098,10914385-10914435,10914529-10914669,
10914754-10914876,10914989-10915066,10915448-10915541,
10915633-10915739,10915936-10916019,10916649-10916744,
10916835-10917023,10917705-10917780,10918507-10918610,
10918708-10918967,10920000-10920086,10920184-10920411,
10920752-10920826,10921264-10921346,10921552-10921661
Length = 787
Score = 26.2 bits (55), Expect = 5.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 303 LCQLLYRRGLPKWP 262
+C LY+R PKWP
Sbjct: 768 VCMSLYKRAYPKWP 781
>02_01_0679 - 5048653-5051394
Length = 913
Score = 26.2 bits (55), Expect = 5.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Frame = -2
Query: 297 QLLYRRGLPKWPNVPKRLELLANMAHVTV-----PLYVKWSK-RWK 178
++L LP VPK LELLA++ + V L V+W + WK
Sbjct: 857 EVLLLLSLPSLREVPKGLELLASLKKLNVTMQHHELKVEWERDNWK 902
>01_05_0216 + 19386132-19386314,19386794-19388092,19388440-19388667
Length = 569
Score = 26.2 bits (55), Expect = 5.6
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = -1
Query: 142 GKDAMKRSCVGIWS--CKRCKRTVDRRSLGILH--YCCLIMQICCXGG 11
G+ A S V + S CK CKR + R+ +LH YC +C G
Sbjct: 396 GEQASASSSVDVDSVVCKNCKRYISNRT-SLLHEAYCVRHNVVCMHDG 442
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 26 DLHDEAAVVENTQAPPVYSPLASLTRPDADTRTFH 130
D H + ++ + QAP V P+ +T P + T H
Sbjct: 2968 DQHIDGSIPSHEQAPNVEEPMTHITGPTSALDTQH 3002
>04_04_0864 - 28852252-28854582
Length = 776
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 51 WRIPKLLLSTVLLH-RLQDQMPTQERFIASLPQNE 152
W++P L L TVLL L PT + +I + +E
Sbjct: 8 WKVPALCLVTVLLQASLSACAPTPKTYIVQMAASE 42
>11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 160 YTCSFCGKDAMKRSCVGIWSCK-RCKRTVDRRSLG 59
Y C+ C KD R + SC+ C + RS+G
Sbjct: 1321 YPCTSCKKDVSFRDIIKCSSCQGNCHKECTLRSVG 1355
>09_02_0112 - 4396756-4397406,4397514-4397717
Length = 284
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 62 QAPPVYSPLASLTRPD 109
Q PPV +PLA+ TRP+
Sbjct: 70 QHPPVVAPLAAPTRPE 85
>07_01_1149 + 10789733-10791209,10791326-10791588,10791745-10791954,
10792398-10792475,10792505-10792705,10792768-10792908,
10794749-10795714,10797824-10797919,10798450-10798638,
10798849-10798956
Length = 1242
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 102 LVSDARGL*TGGAWVFSTTAASSCRSAVQ 16
L SD L GG STT+ SSC + +Q
Sbjct: 1053 LQSDTLNLIQGGVTAGSTTSESSCAATLQ 1081
>03_05_0487 + 24838620-24838967,24840526-24840747,24840819-24841109,
24841316-24841513,24841641-24841705,24841788-24841874,
24841988-24842108,24842200-24842244,24842321-24842458,
24842571-24842643,24842723-24842799,24842882-24842989,
24843108-24843224,24843524-24843679,24843780-24843881,
24844036-24844161,24844237-24844314,24844390-24844485,
24844592-24844707,24844781-24844850,24844930-24844983,
24845062-24845205,24845297-24845596,24845780-24846202,
24846316-24846429
Length = 1222
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = -1
Query: 160 YTCSFCGKDAMKRSCVGIWSCKRCKRTVDRRSLGILHYCCLIMQ 29
+ C CG A+ + C+ CK D + I + C L+ Q
Sbjct: 1154 HVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1197
>02_05_1152 +
34494423-34494586,34494725-34494781,34494851-34494908,
34494989-34495088,34495270-34495383,34495588-34495810,
34496112-34496246,34496575-34496679,34496906-34497001,
34497387-34497516,34497933-34497983,34498538-34498648,
34499267-34499376,34499490-34499655,34499740-34499820,
34499907-34499975,34500099-34500212,34500699-34500760,
34500894-34500990,34501152-34501271
Length = 720
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 307 FSLSTFVSERFTKMAKRTKKVGITGKYGTRYGASLRKMV 191
FS+ S RF+++ R + I+G G + LRK V
Sbjct: 166 FSIEIAESSRFSELLLRIDTMTISGMVGMTEASDLRKKV 204
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,007,766
Number of Sequences: 37544
Number of extensions: 180254
Number of successful extensions: 470
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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