Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_N06
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75554-9|CAA99952.2|  278|Caenorhabditis elegans Hypothetical pr...    32   0.30 
U64834-3|AAB04824.1|  437|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z67735-2|CAA91530.2|  403|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U80440-4|AAK21471.1|  186|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA ...    27   8.5  
AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid de...    27   8.5  

>Z75554-9|CAA99952.2|  278|Caenorhabditis elegans Hypothetical
           protein ZC455.11 protein.
          Length = 278

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 17/40 (42%), Positives = 26/40 (65%)
 Frame = -1

Query: 323 SLSKSTYLSHSKGNKSILLIY*VGNISLSNHVVRNFVGDW 204
           +LS + Y+ HS G   IL+I+   N+ L+ H++R FV DW
Sbjct: 3   NLSTAYYVFHSVG---ILMIF--SNLVLNLHILRKFVNDW 37


>U64834-3|AAB04824.1|  437|Caenorhabditis elegans Hypothetical
           protein F54D11.1 protein.
          Length = 437

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = -1

Query: 293 SKGNKSILLIY*VGNISLSNHVVRNFVGDWLPVFHKDVLFWATASII 153
           S GN + L +Y V  +  SN+V +NF+ D++ VF K V    T + I
Sbjct: 131 SDGNNTGLDLYTVDQVEHSNYVEQNFL-DFIFVFRKKVFAPTTDATI 176


>Z67735-2|CAA91530.2|  403|Caenorhabditis elegans Hypothetical
           protein C15A7.1 protein.
          Length = 403

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 278 IYSPYYAINTCFSIENTLLDVYASPILVDHIVS 376
           +Y+P   I TC  I   L   YA P+LV +++S
Sbjct: 270 LYAPMIFICTCLIISGFLPSEYALPLLVFNLIS 302


>U80440-4|AAK21471.1|  186|Caenorhabditis elegans Hypothetical
           protein T21E12.5 protein.
          Length = 186

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/56 (21%), Positives = 30/56 (53%)
 Frame = -2

Query: 430 QSATNKMKHEKIFLRYSARYDVINQYWRRINVQQGVLYRKARIYRIVRGINPSYSS 263
           +S  + ++ +  F  Y++ + + NQ   +IN  +  +  +  ++ +V G+NP  +S
Sbjct: 130 ESTLSLIRQKSYFDAYASDFIIRNQQNEKINTVKDEMDAEEMVHHLVHGMNPHKNS 185


>AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-7 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 354 YWLITSYLAEYLRNIFSCFILLVADWCVTS 443
           +W  T+++A Y+   F     L A WC+ S
Sbjct: 213 FWKETAFIAFYVAGTFRYCFTLHATWCINS 242


>AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid
           desaturase protein 7 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 354 YWLITSYLAEYLRNIFSCFILLVADWCVTS 443
           +W  T+++A Y+   F     L A WC+ S
Sbjct: 213 FWKETAFIAFYVAGTFRYCFTLHATWCINS 242


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,363,569
Number of Sequences: 27780
Number of extensions: 272989
Number of successful extensions: 661
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)