Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_N01
         (764 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1330 - 29375494-29376912                                         28   7.1  
02_04_0076 - 19486360-19488723                                         28   7.1  

>06_03_1330 - 29375494-29376912
          Length = 472

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 80  SS*C*KSQCTPN*STNCIFYTIDGP 154
           +S C  + C P    NC+++T DGP
Sbjct: 399 ASLCVPADCCPEVKGNCVYFTDDGP 423


>02_04_0076 - 19486360-19488723
          Length = 787

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 184 YFKPDIFINNGTINSIKYAICRLIGCA 104
           Y   D+F+ NG +    YA CR +GCA
Sbjct: 135 YVGADLFVANGLVTM--YASCRSLGCA 159


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,410,682
Number of Sequences: 37544
Number of extensions: 275920
Number of successful extensions: 390
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)